RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
SRSF5-212ENST00000556184 PTPRGP23470 1445 aa13.74□□□□□ -0.21
SRSF5-212ENST00000556184 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
SRSF5-212ENST00000556184 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
SRSF5-212ENST00000556184 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
SRSF5-212ENST00000556184 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
SRSF5-212ENST00000556184 PLIN1O60240 522 aa13.73□□□□□ -0.21
SRSF5-212ENST00000556184 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
SRSF5-212ENST00000556184 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
SRSF5-212ENST00000556184 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
SRSF5-212ENST00000556184 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
SRSF5-212ENST00000556184 NUP160Q12769 1436 aa13.72□□□□□ -0.21
SRSF5-212ENST00000556184 ERCC6L2Q5T890 1561 aa13.72□□□□□ -0.21
SRSF5-212ENST00000556184 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
SRSF5-212ENST00000556184 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-212ENST00000556184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.72□□□□□ -0.21
SRSF5-212ENST00000556184 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
SRSF5-212ENST00000556184 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.22
SRSF5-212ENST00000556184 L1TD1Q5T7N2 865 aaKnown RBP13.71□□□□□ -0.22
SRSF5-212ENST00000556184 ZNF521Q96K83 1311 aa13.71□□□□□ -0.22
SRSF5-212ENST00000556184 CROCC2H7BZ55 1655 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 SENP3-EIF4A1A0A087X0R7 540 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 SLC4A3P48751 1232 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 NUP155O75694 1391 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
SRSF5-212ENST00000556184 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 LAMC1P11047 1609 aa13.7□□□□□ -0.22
SRSF5-212ENST00000556184 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-212ENST00000556184 DCAF11Q8TEB1 546 aa13.69□□□□□ -0.22
SRSF5-212ENST00000556184 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
SRSF5-212ENST00000556184 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
SRSF5-212ENST00000556184 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
SRSF5-212ENST00000556184 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
SRSF5-212ENST00000556184 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
SRSF5-212ENST00000556184 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
SRSF5-212ENST00000556184 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
SRSF5-212ENST00000556184 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
SRSF5-212ENST00000556184 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
SRSF5-212ENST00000556184 BECN1Q14457 450 aa13.66□□□□□ -0.22
SRSF5-212ENST00000556184 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 TESK2Q96S53 571 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 SKAP1Q86WV1 359 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
SRSF5-212ENST00000556184 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
SRSF5-212ENST00000556184 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
SRSF5-212ENST00000556184 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
SRSF5-212ENST00000556184 USP19O94966 1318 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 MAPK8IP3Q9UPT6 1336 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 AAMPQ13685 434 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
SRSF5-212ENST00000556184 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
SRSF5-212ENST00000556184 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
SRSF5-212ENST00000556184 PANK3Q9H999 370 aa13.62□□□□□ -0.23
SRSF5-212ENST00000556184 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
SRSF5-212ENST00000556184 NINLQ9Y2I6 1382 aa13.62□□□□□ -0.23
SRSF5-212ENST00000556184 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
SRSF5-212ENST00000556184 TMF1P82094 1093 aa13.61□□□□□ -0.23
SRSF5-212ENST00000556184 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
SRSF5-212ENST00000556184 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
SRSF5-212ENST00000556184 ABCC10Q5T3U5 1492 aa13.61□□□□□ -0.23
SRSF5-212ENST00000556184 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
SRSF5-212ENST00000556184 ANTXR1Q9H6X2 564 aa13.6□□□□□ -0.23
SRSF5-212ENST00000556184 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
SRSF5-212ENST00000556184 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
SRSF5-212ENST00000556184 TSPY4P0CV99 314 aa13.59□□□□□ -0.23
SRSF5-212ENST00000556184 TSPY10P0CW01 314 aa13.59□□□□□ -0.23
SRSF5-212ENST00000556184 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
SRSF5-212ENST00000556184 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 PIK3C2GO75747 1445 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 RSPH4AQ5TD94 716 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 CLCN1P35523 988 aa13.58□□□□□ -0.24
SRSF5-212ENST00000556184 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.241e-10■□□□□ 10.3
SRSF5-212ENST00000556184 RRAGDQ9NQL2 400 aaPredicted RBP13.58□□□□□ -0.24
SRSF5-212ENST00000556184 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
SRSF5-212ENST00000556184 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
SRSF5-212ENST00000556184 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
SRSF5-212ENST00000556184 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
SRSF5-212ENST00000556184 POGKQ9P215 609 aa13.57□□□□□ -0.24
SRSF5-212ENST00000556184 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
SRSF5-212ENST00000556184 CCDC141Q6ZP82 1450 aa13.56□□□□□ -0.24
SRSF5-212ENST00000556184 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
SRSF5-212ENST00000556184 E9PSI1 815 aa13.55□□□□□ -0.24
SRSF5-212ENST00000556184 RGS3P49796 1198 aa13.55□□□□□ -0.24
SRSF5-212ENST00000556184 NBPF1Q3BBV0 1214 aa13.55□□□□□ -0.24
SRSF5-212ENST00000556184 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
SRSF5-212ENST00000556184 ATP10AO60312 1499 aa13.55□□□□□ -0.24
SRSF5-212ENST00000556184 A2MP01023 1474 aa13.54□□□□□ -0.24
SRSF5-212ENST00000556184 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
SRSF5-212ENST00000556184 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
SRSF5-212ENST00000556184 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
SRSF5-212ENST00000556184 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
SRSF5-212ENST00000556184 ATP10BO94823 1461 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms