RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 RBM46Q8TBY0 533 aaKnown RBP4.47□□□□□ -1.69
NEK9-208ENST00000555961 GGCXP38435 758 aa4.46□□□□□ -1.7
NEK9-208ENST00000555961 MLLT3P42568 568 aaPredicted RBP4.46□□□□□ -1.7
NEK9-208ENST00000555961 SWT1Q5T5J6 900 aaKnown RBP4.46□□□□□ -1.7
NEK9-208ENST00000555961 SMYD5Q6GMV2 418 aa4.46□□□□□ -1.7
NEK9-208ENST00000555961 TTC13Q8NBP0 860 aa4.46□□□□□ -1.7
NEK9-208ENST00000555961 MTRQ99707 1265 aa4.46□□□□□ -1.7
NEK9-208ENST00000555961 FCHSD2O94868 740 aa4.45□□□□□ -1.7
NEK9-208ENST00000555961 DNAJB2P25686 324 aa4.45□□□□□ -1.7
NEK9-208ENST00000555961 TJAP1Q5JTD0 557 aa4.45□□□□□ -1.7
NEK9-208ENST00000555961 NPDC1Q9NQX5 325 aaPredicted RBP4.45□□□□□ -1.7
NEK9-208ENST00000555961 FAM181BA6NEQ2 426 aa4.44□□□□□ -1.7
NEK9-208ENST00000555961 C3orf80F5H4A9 247 aa4.44□□□□□ -1.7
NEK9-208ENST00000555961 APLP1P51693 650 aa4.44□□□□□ -1.7
NEK9-208ENST00000555961 PTGDRQ13258 359 aa4.44□□□□□ -1.7
NEK9-208ENST00000555961 KMT5BQ4FZB7 885 aa4.44□□□□□ -1.7
NEK9-208ENST00000555961 COPS2P61201 443 aa4.43□□□□□ -1.7
NEK9-208ENST00000555961 PLCB2Q00722 1185 aa4.43□□□□□ -1.7
NEK9-208ENST00000555961 RSPH4AQ5TD94 716 aa4.43□□□□□ -1.7
NEK9-208ENST00000555961 PCDHB3Q9Y5E6 796 aa4.43□□□□□ -1.7
NEK9-208ENST00000555961 EYA1Q99502 592 aa4.42□□□□□ -1.7
NEK9-208ENST00000555961 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.42□□□□□ -1.7
NEK9-208ENST00000555961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.41□□□□□ -1.7
NEK9-208ENST00000555961 SEMA3EO15041 775 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 OATP04181 439 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 HAP1P54257 671 aaPredicted RBP4.41□□□□□ -1.7
NEK9-208ENST00000555961 PPP1R18Q6NYC8 613 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 ZNF516Q92618 1163 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 PRKD2Q9BZL6 878 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 TMEM134Q9H6X4 195 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 ADGRG1Q9Y653 693 aa4.41□□□□□ -1.7
NEK9-208ENST00000555961 RCCD1A6NED2 376 aa4.4□□□□□ -1.71
NEK9-208ENST00000555961 TULP1O00294 542 aaPredicted RBP4.4□□□□□ -1.71
NEK9-208ENST00000555961 ZPR1O75312 459 aa4.4□□□□□ -1.71
NEK9-208ENST00000555961 HIC1Q14526 733 aa4.4□□□□□ -1.71
NEK9-208ENST00000555961 V9GY48 417 aaPredicted RBP4.4□□□□□ -1.71
NEK9-208ENST00000555961 WIPF1O43516 503 aa4.39□□□□□ -1.71
NEK9-208ENST00000555961 CFHP08603 1231 aa4.39□□□□□ -1.71
NEK9-208ENST00000555961 TMUB1Q9BVT8 246 aa4.39□□□□□ -1.71
NEK9-208ENST00000555961 TESPA1A2RU30 521 aaPredicted RBP4.38□□□□□ -1.71
NEK9-208ENST00000555961 NR1I2O75469 434 aa4.38□□□□□ -1.71
NEK9-208ENST00000555961 WFS1O76024 890 aa4.38□□□□□ -1.71
NEK9-208ENST00000555961 FAM161AQ3B820 660 aa4.38□□□□□ -1.71
NEK9-208ENST00000555961 BLOC1S3Q6QNY0 202 aa4.38□□□□□ -1.71
NEK9-208ENST00000555961 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
NEK9-208ENST00000555961 GNPATO15228 680 aa4.37□□□□□ -1.71
NEK9-208ENST00000555961 ACTN4O43707 911 aaKnown RBP4.37□□□□□ -1.71
NEK9-208ENST00000555961 RDH13Q8NBN7 331 aa4.37□□□□□ -1.71
NEK9-208ENST00000555961 NKX2-3Q8TAU0 364 aa4.37□□□□□ -1.71
NEK9-208ENST00000555961 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
NEK9-208ENST00000555961 RBM26Q5T8P6 1007 aaKnown RBP4.36□□□□□ -1.71
NEK9-208ENST00000555961 GPIHBP1Q8IV16 184 aa4.36□□□□□ -1.71
NEK9-208ENST00000555961 PXYLP1Q8TE99 480 aa4.36□□□□□ -1.71
NEK9-208ENST00000555961 ADH1BP00325 375 aa4.35□□□□□ -1.71
NEK9-208ENST00000555961 METTL3Q86U44 580 aaKnown RBP4.35□□□□□ -1.71
NEK9-208ENST00000555961 SULF1Q8IWU6 871 aa4.35□□□□□ -1.71
NEK9-208ENST00000555961 PDZRN3Q9UPQ7 1066 aa4.35□□□□□ -1.71
NEK9-208ENST00000555961 TLL1O43897 1013 aa4.34□□□□□ -1.71
NEK9-208ENST00000555961 SLC19A1P41440 591 aa4.34□□□□□ -1.71
NEK9-208ENST00000555961 ANKLE1Q8NAG6 615 aa4.34□□□□□ -1.71
NEK9-208ENST00000555961 DDX11L8A8MPP1 907 aa4.33□□□□□ -1.72
NEK9-208ENST00000555961 RNF223E7ERA6 249 aa4.33□□□□□ -1.72
NEK9-208ENST00000555961 SLC10A3P09131 477 aa4.33□□□□□ -1.72
NEK9-208ENST00000555961 SLC6A16Q9GZN6 736 aa4.33□□□□□ -1.72
NEK9-208ENST00000555961 DAXXQ9UER7 740 aaPredicted RBP4.33□□□□□ -1.72
NEK9-208ENST00000555961 S1PR4O95977 384 aa4.32□□□□□ -1.72
NEK9-208ENST00000555961 GRIPAP1Q4V328 841 aa4.32□□□□□ -1.72
NEK9-208ENST00000555961 VSIG10Q8N0Z9 540 aa4.32□□□□□ -1.72
NEK9-208ENST00000555961 PUS10Q3MIT2 529 aaKnown RBP4.31□□□□□ -1.72
NEK9-208ENST00000555961 SCUBE3Q8IX30 993 aa4.31□□□□□ -1.72
NEK9-208ENST00000555961 SPSB2Q99619 263 aa4.31□□□□□ -1.72
NEK9-208ENST00000555961 POTECB2RU33 542 aa4.3□□□□□ -1.72
NEK9-208ENST00000555961 FMNL1O95466 1100 aaPredicted RBP4.3□□□□□ -1.72
NEK9-208ENST00000555961 FECHP22830 423 aa4.3□□□□□ -1.72
NEK9-208ENST00000555961 ATP6V1AP38606 617 aa4.3□□□□□ -1.72
NEK9-208ENST00000555961 PKDCCQ504Y2 493 aa4.3□□□□□ -1.72
NEK9-208ENST00000555961 ZNF697Q5TEC3 545 aa4.3□□□□□ -1.72
NEK9-208ENST00000555961 ZNF598Q86UK7 904 aaKnown RBP4.3□□□□□ -1.72
NEK9-208ENST00000555961 PPEF1O14829 653 aaPredicted RBP4.29□□□□□ -1.72
NEK9-208ENST00000555961 GPR37O15354 613 aa4.29□□□□□ -1.72
NEK9-208ENST00000555961 FUT2Q10981 343 aa4.29□□□□□ -1.72
NEK9-208ENST00000555961 SPRYD7Q5W111 196 aa4.29□□□□□ -1.72
NEK9-208ENST00000555961 GCGRP47871 477 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 MAP2K5Q13163 448 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 Q3C1V9 767 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 MORN1Q5T089 497 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 KCTD17Q8N5Z5 321 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 KRI1Q8N9T8 703 aaKnown RBP4.28□□□□□ -1.72
NEK9-208ENST00000555961 NLRP7Q8WX94 980 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 KDM2AQ9Y2K7 1162 aa4.28□□□□□ -1.72
NEK9-208ENST00000555961 FAM187AA6NFU0 413 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 ZBTB24O43167 697 aaPredicted RBP4.27□□□□□ -1.73
NEK9-208ENST00000555961 DGAT1O75907 488 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 PRR20EP86478 221 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 PRR20CP86479 221 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 PRR20DP86480 221 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 PRR20BP86481 221 aa4.27□□□□□ -1.73
NEK9-208ENST00000555961 PRR20AP86496 221 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms