RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.12
TMEM260-208ENST00000555905 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
TMEM260-208ENST00000555905 MYO5BQ9ULV0 1848 aa15.82■□□□□ 0.12
TMEM260-208ENST00000555905 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
TMEM260-208ENST00000555905 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
TMEM260-208ENST00000555905 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
TMEM260-208ENST00000555905 SETD1BQ9UPS6 1966 aaKnown RBP15.8■□□□□ 0.12
TMEM260-208ENST00000555905 MYO3AQ8NEV4 1616 aa15.8■□□□□ 0.12
TMEM260-208ENST00000555905 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
TMEM260-208ENST00000555905 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
TMEM260-208ENST00000555905 KDM4FA0A1W2PPD8 638 aa15.79■□□□□ 0.12
TMEM260-208ENST00000555905 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
TMEM260-208ENST00000555905 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
TMEM260-208ENST00000555905 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
TMEM260-208ENST00000555905 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
TMEM260-208ENST00000555905 PPLO60437 1756 aa15.77■□□□□ 0.12
TMEM260-208ENST00000555905 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
TMEM260-208ENST00000555905 ZNF142P52746 1687 aaPredicted RBP15.75■□□□□ 0.11
TMEM260-208ENST00000555905 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
TMEM260-208ENST00000555905 NEXMIFQ5QGS0 1516 aa15.74■□□□□ 0.11
TMEM260-208ENST00000555905 MYOM2P54296 1465 aa15.74■□□□□ 0.11
TMEM260-208ENST00000555905 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-208ENST00000555905 HDGFP51858 240 aaKnown RBP15.73■□□□□ 0.11
TMEM260-208ENST00000555905 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-208ENST00000555905 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
TMEM260-208ENST00000555905 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
TMEM260-208ENST00000555905 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
TMEM260-208ENST00000555905 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
TMEM260-208ENST00000555905 TMEM2Q9UHN6 1383 aa15.71■□□□□ 0.11
TMEM260-208ENST00000555905 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
TMEM260-208ENST00000555905 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
TMEM260-208ENST00000555905 NRXN1Q9ULB1 1477 aa15.69■□□□□ 0.1
TMEM260-208ENST00000555905 ADGRF5Q8IZF2 1346 aa15.68■□□□□ 0.1
TMEM260-208ENST00000555905 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
TMEM260-208ENST00000555905 EID1Q9Y6B2 187 aa15.68■□□□□ 0.1
TMEM260-208ENST00000555905 SLIT1O75093 1534 aa15.68■□□□□ 0.1
TMEM260-208ENST00000555905 RALGAPBQ86X10 1494 aa15.67■□□□□ 0.1
TMEM260-208ENST00000555905 KIAA1210Q9ULL0 1709 aa15.67■□□□□ 0.1
TMEM260-208ENST00000555905 ARHGAP23Q9P227 1491 aa15.66■□□□□ 0.1
TMEM260-208ENST00000555905 PIK3C2GO75747 1445 aa15.66■□□□□ 0.1
TMEM260-208ENST00000555905 LAMC1P11047 1609 aa15.65■□□□□ 0.1
TMEM260-208ENST00000555905 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
TMEM260-208ENST00000555905 TXNDC2Q86VQ3 553 aa15.64■□□□□ 0.09
TMEM260-208ENST00000555905 SCAF11Q99590 1463 aaKnown RBP15.62■□□□□ 0.09
TMEM260-208ENST00000555905 LTKP29376 864 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 ANKLE2Q86XL3 938 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 BCANQ96GW7 911 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
TMEM260-208ENST00000555905 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
TMEM260-208ENST00000555905 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
TMEM260-208ENST00000555905 SETBP1Q9Y6X0 1596 aa15.6■□□□□ 0.09
TMEM260-208ENST00000555905 ALKQ9UM73 1620 aa15.59■□□□□ 0.09
TMEM260-208ENST00000555905 IQGAP1P46940 1657 aa15.59■□□□□ 0.09
TMEM260-208ENST00000555905 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
TMEM260-208ENST00000555905 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
TMEM260-208ENST00000555905 LMTK3Q96Q04 1460 aa15.58■□□□□ 0.08
TMEM260-208ENST00000555905 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
TMEM260-208ENST00000555905 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
TMEM260-208ENST00000555905 USP47Q96K76 1375 aa15.55■□□□□ 0.08
TMEM260-208ENST00000555905 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
TMEM260-208ENST00000555905 ADGRB1O14514 1584 aa15.54■□□□□ 0.08
TMEM260-208ENST00000555905 DIP2AQ14689 1571 aa15.54■□□□□ 0.08
TMEM260-208ENST00000555905 HSPA5P11021 654 aaKnown RBP15.53■□□□□ 0.08
TMEM260-208ENST00000555905 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
TMEM260-208ENST00000555905 MED14O60244 1454 aa15.52■□□□□ 0.08
TMEM260-208ENST00000555905 NPHP4O75161 1426 aaPredicted RBP15.52■□□□□ 0.08
TMEM260-208ENST00000555905 ADAMTS13Q76LX8 1427 aa15.52■□□□□ 0.08
TMEM260-208ENST00000555905 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.08
TMEM260-208ENST00000555905 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.08
TMEM260-208ENST00000555905 HSPA2P54652 639 aa15.52■□□□□ 0.08
TMEM260-208ENST00000555905 TBX22Q9Y458 520 aa15.51■□□□□ 0.07
TMEM260-208ENST00000555905 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
TMEM260-208ENST00000555905 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
TMEM260-208ENST00000555905 YTHDC2Q9H6S0 1430 aaKnown RBP15.5■□□□□ 0.07
TMEM260-208ENST00000555905 METP08581 1390 aa15.49■□□□□ 0.07
TMEM260-208ENST00000555905 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
TMEM260-208ENST00000555905 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
TMEM260-208ENST00000555905 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
TMEM260-208ENST00000555905 STK26Q9P289 416 aa15.48■□□□□ 0.07
TMEM260-208ENST00000555905 TRAK1Q9UPV9 953 aa15.48■□□□□ 0.07
TMEM260-208ENST00000555905 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
TMEM260-208ENST00000555905 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
TMEM260-208ENST00000555905 ARHGEF28Q8N1W1 1705 aaKnown RBP15.46■□□□□ 0.07
TMEM260-208ENST00000555905 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
TMEM260-208ENST00000555905 PIK3R4Q99570 1358 aa15.46■□□□□ 0.07
TMEM260-208ENST00000555905 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.06
TMEM260-208ENST00000555905 ABCC11Q96J66 1382 aa15.45■□□□□ 0.06
TMEM260-208ENST00000555905 DLC1Q96QB1 1528 aa15.44■□□□□ 0.06
TMEM260-208ENST00000555905 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
TMEM260-208ENST00000555905 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
TMEM260-208ENST00000555905 POGKQ9P215 609 aa15.43■□□□□ 0.06
TMEM260-208ENST00000555905 QRICH2Q9H0J4 1663 aa15.43■□□□□ 0.06
TMEM260-208ENST00000555905 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
TMEM260-208ENST00000555905 TECPR2O15040 1411 aa15.43■□□□□ 0.06
TMEM260-208ENST00000555905 AMOTL2Q9Y2J4 779 aa15.42■□□□□ 0.06
TMEM260-208ENST00000555905 CPS1P31327 1500 aa15.42■□□□□ 0.06
TMEM260-208ENST00000555905 SIRT1Q96EB6 747 aa15.41■□□□□ 0.06
TMEM260-208ENST00000555905 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms