RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
EFCAB11-208ENST00000555872 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
EFCAB11-208ENST00000555872 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
EFCAB11-208ENST00000555872 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
EFCAB11-208ENST00000555872 SOX12O15370 315 aa13.38□□□□□ -0.27
EFCAB11-208ENST00000555872 TCOF1Q13428 1488 aaKnown RBP13.38□□□□□ -0.27
EFCAB11-208ENST00000555872 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
EFCAB11-208ENST00000555872 HDAC5Q9UQL6 1122 aa13.37□□□□□ -0.27
EFCAB11-208ENST00000555872 CLSTN1O94985 981 aa13.36□□□□□ -0.27
EFCAB11-208ENST00000555872 KIF14Q15058 1648 aa13.36□□□□□ -0.27
EFCAB11-208ENST00000555872 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
EFCAB11-208ENST00000555872 CCDC7Q96M83 1385 aa13.36□□□□□ -0.27
EFCAB11-208ENST00000555872 MMP14P50281 582 aa13.35□□□□□ -0.27
EFCAB11-208ENST00000555872 CLGNO14967 610 aa13.34□□□□□ -0.27
EFCAB11-208ENST00000555872 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
EFCAB11-208ENST00000555872 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
EFCAB11-208ENST00000555872 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.27
EFCAB11-208ENST00000555872 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.27
EFCAB11-208ENST00000555872 ZCCHC11Q5TAX3 1644 aaKnown RBP13.33□□□□□ -0.27
EFCAB11-208ENST00000555872 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
EFCAB11-208ENST00000555872 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
EFCAB11-208ENST00000555872 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
EFCAB11-208ENST00000555872 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
EFCAB11-208ENST00000555872 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
EFCAB11-208ENST00000555872 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
EFCAB11-208ENST00000555872 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
EFCAB11-208ENST00000555872 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
EFCAB11-208ENST00000555872 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
EFCAB11-208ENST00000555872 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
EFCAB11-208ENST00000555872 E9PSI1 815 aa13.29□□□□□ -0.28
EFCAB11-208ENST00000555872 PSEN1P49768 467 aa13.29□□□□□ -0.28
EFCAB11-208ENST00000555872 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
EFCAB11-208ENST00000555872 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
EFCAB11-208ENST00000555872 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
EFCAB11-208ENST00000555872 ARID3CA6NKF2 412 aa13.28□□□□□ -0.28
EFCAB11-208ENST00000555872 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-208ENST00000555872 POGKQ9P215 609 aa13.27□□□□□ -0.28
EFCAB11-208ENST00000555872 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.29
EFCAB11-208ENST00000555872 APPP05067 770 aa13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 MCCP23508 829 aa13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.29
EFCAB11-208ENST00000555872 CERS3Q8IU89 383 aa13.25□□□□□ -0.29
EFCAB11-208ENST00000555872 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
EFCAB11-208ENST00000555872 PSMD1Q99460 953 aa13.25□□□□□ -0.29
EFCAB11-208ENST00000555872 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
EFCAB11-208ENST00000555872 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
EFCAB11-208ENST00000555872 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
EFCAB11-208ENST00000555872 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
EFCAB11-208ENST00000555872 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
EFCAB11-208ENST00000555872 PNISRQ8TF01 805 aaKnown RBP13.23□□□□□ -0.29
EFCAB11-208ENST00000555872 CROCC2H7BZ55 1655 aa13.23□□□□□ -0.29
EFCAB11-208ENST00000555872 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
EFCAB11-208ENST00000555872 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
EFCAB11-208ENST00000555872 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
EFCAB11-208ENST00000555872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.22□□□□□ -0.29
EFCAB11-208ENST00000555872 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
EFCAB11-208ENST00000555872 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
EFCAB11-208ENST00000555872 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
EFCAB11-208ENST00000555872 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
EFCAB11-208ENST00000555872 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
EFCAB11-208ENST00000555872 PLIN1O60240 522 aa13.21□□□□□ -0.29
EFCAB11-208ENST00000555872 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
EFCAB11-208ENST00000555872 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.3
EFCAB11-208ENST00000555872 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
EFCAB11-208ENST00000555872 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
EFCAB11-208ENST00000555872 UTP14CQ5TAP6 766 aaKnown RBP13.2□□□□□ -0.3
EFCAB11-208ENST00000555872 DAPK1P53355 1430 aa13.2□□□□□ -0.3
EFCAB11-208ENST00000555872 PTMSP20962 102 aa13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 CLCN1P35523 988 aa13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
EFCAB11-208ENST00000555872 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
EFCAB11-208ENST00000555872 PHF14O94880 888 aa13.18□□□□□ -0.3
EFCAB11-208ENST00000555872 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
EFCAB11-208ENST00000555872 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 NAIPQ13075 1403 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 SHANK2Q9UPX8 1470 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
EFCAB11-208ENST00000555872 ABCC5O15440 1437 aa13.16□□□□□ -0.3
EFCAB11-208ENST00000555872 DMTNQ08495 405 aa13.16□□□□□ -0.3
EFCAB11-208ENST00000555872 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
EFCAB11-208ENST00000555872 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
EFCAB11-208ENST00000555872 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
EFCAB11-208ENST00000555872 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
EFCAB11-208ENST00000555872 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
EFCAB11-208ENST00000555872 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
EFCAB11-208ENST00000555872 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
EFCAB11-208ENST00000555872 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
EFCAB11-208ENST00000555872 PLCH2O75038 1416 aa13.14□□□□□ -0.31
EFCAB11-208ENST00000555872 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
EFCAB11-208ENST00000555872 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
EFCAB11-208ENST00000555872 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms