RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.26
LINC00640-202ENST00000555801 EEA1Q15075 1411 aa7.15□□□□□ -1.27
LINC00640-202ENST00000555801 FGD6Q6ZV73 1430 aa7.15□□□□□ -1.27
LINC00640-202ENST00000555801 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.27
LINC00640-202ENST00000555801 CLIP1P30622 1438 aa7.14□□□□□ -1.27
LINC00640-202ENST00000555801 MSH6P52701 1360 aa7.14□□□□□ -1.27
LINC00640-202ENST00000555801 R3HDM1Q15032 1099 aaKnown RBP7.14□□□□□ -1.27
LINC00640-202ENST00000555801 TXNDC2Q86VQ3 553 aa7.14□□□□□ -1.27
LINC00640-202ENST00000555801 NHSL1Q5SYE7 1610 aa7.13□□□□□ -1.27
LINC00640-202ENST00000555801 A2MP01023 1474 aa7.13□□□□□ -1.27
LINC00640-202ENST00000555801 MIA2Q96PC5 1412 aa7.13□□□□□ -1.27
LINC00640-202ENST00000555801 HNRNPMP52272 730 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC00640-202ENST00000555801 SHPRHQ149N8 1683 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 FMN1Q68DA7 1419 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SPDYE2BA6NHP3 402 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SPDYE6P0CI01 402 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SF3B2Q13435 895 aaKnown RBP7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SPDYE2Q495Y8 402 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SLC26A8Q96RN1 970 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 USP21Q9UK80 565 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SAMD9LQ8IVG5 1584 aa7.12□□□□□ -1.27
LINC00640-202ENST00000555801 SCAF11Q99590 1463 aaKnown RBP7.11□□□□□ -1.27
LINC00640-202ENST00000555801 KCNA6P17658 529 aa7.11□□□□□ -1.27
LINC00640-202ENST00000555801 NWD1Q149M9 1564 aa7.11□□□□□ -1.27
LINC00640-202ENST00000555801 BCL9LQ86UU0 1499 aa7.11□□□□□ -1.27
LINC00640-202ENST00000555801 NLRP1Q9C000 1473 aa7.11□□□□□ -1.27
LINC00640-202ENST00000555801 BLMP54132 1417 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-202ENST00000555801 SLC34A2O95436 690 aa7.1□□□□□ -1.27
LINC00640-202ENST00000555801 C14orf37Q86TY3 774 aa7.1□□□□□ -1.27
LINC00640-202ENST00000555801 TRPC5Q9UL62 973 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-202ENST00000555801 ATF5Q9Y2D1 282 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-202ENST00000555801 EP400Q96L91 3159 aa7.1□□□□□ -1.27
LINC00640-202ENST00000555801 PZPP20742 1482 aa7.1□□□□□ -1.27
LINC00640-202ENST00000555801 TROQ12816 1431 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-202ENST00000555801 ADGBQ8N7X0 1667 aa7.09□□□□□ -1.27
LINC00640-202ENST00000555801 DDX17Q92841 729 aaKnown RBP7.09□□□□□ -1.27
LINC00640-202ENST00000555801 CDC42BPBQ9Y5S2 1711 aa7.09□□□□□ -1.27
LINC00640-202ENST00000555801 PLXNC1O60486 1568 aa7.08□□□□□ -1.28
LINC00640-202ENST00000555801 TIAM1Q13009 1591 aa7.08□□□□□ -1.28
LINC00640-202ENST00000555801 WASHC2CQ9Y4E1 1318 aa7.08□□□□□ -1.28
LINC00640-202ENST00000555801 KIF3BO15066 747 aa7.08□□□□□ -1.28
LINC00640-202ENST00000555801 UBTFP17480 764 aaKnown RBP7.08□□□□□ -1.28
LINC00640-202ENST00000555801 FAM163AQ96GL9 167 aaPredicted RBP7.08□□□□□ -1.28
LINC00640-202ENST00000555801 DIP2AQ14689 1571 aa7.08□□□□□ -1.28
LINC00640-202ENST00000555801 PRDM15P57071 1507 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-202ENST00000555801 NCOA2Q15596 1464 aa7.07□□□□□ -1.28
LINC00640-202ENST00000555801 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-202ENST00000555801 BCANQ96GW7 911 aa7.07□□□□□ -1.28
LINC00640-202ENST00000555801 SYCP2Q9BX26 1530 aa7.06□□□□□ -1.28
LINC00640-202ENST00000555801 AHDC1Q5TGY3 1603 aaPredicted RBP7.06□□□□□ -1.28
LINC00640-202ENST00000555801 BRINP3Q76B58 766 aa7.06□□□□□ -1.28
LINC00640-202ENST00000555801 SLC4A1APQ9BWU0 796 aaKnown RBP7.06□□□□□ -1.28
LINC00640-202ENST00000555801 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
LINC00640-202ENST00000555801 EID1Q9Y6B2 187 aa7.06□□□□□ -1.28
LINC00640-202ENST00000555801 CAMTA1Q9Y6Y1 1673 aa7.06□□□□□ -1.28
LINC00640-202ENST00000555801 EN1Q05925 392 aaPredicted RBP7.05□□□□□ -1.28
LINC00640-202ENST00000555801 MAST1Q9Y2H9 1570 aa7.04□□□□□ -1.28
LINC00640-202ENST00000555801 ATRNO75882 1429 aa7.04□□□□□ -1.28
LINC00640-202ENST00000555801 PNPLA6Q8IY17 1366 aa7.04□□□□□ -1.28
LINC00640-202ENST00000555801 KDM5AP29375 1690 aaKnown RBP7.03□□□□□ -1.28
LINC00640-202ENST00000555801 PREX2Q70Z35 1606 aa7.03□□□□□ -1.28
LINC00640-202ENST00000555801 GIGYF1O75420 1035 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-202ENST00000555801 ATF3P18847 181 aa7.03□□□□□ -1.28
LINC00640-202ENST00000555801 BAG6P46379 1132 aa7.03□□□□□ -1.28
LINC00640-202ENST00000555801 RTEL1-TNFRSF6BF6WH68 1400 aa7.02□□□□□ -1.29
LINC00640-202ENST00000555801 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
LINC00640-202ENST00000555801 GJD4Q96KN9 370 aaPredicted RBP7.02□□□□□ -1.29
LINC00640-202ENST00000555801 CCDC18Q5T9S5 1454 aa7.02□□□□□ -1.29
LINC00640-202ENST00000555801 UBR1Q8IWV7 1749 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 INO80Q9ULG1 1556 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-202ENST00000555801 PLEKHH2Q8IVE3 1493 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 PRR29P0C7W0 189 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 STAG3Q9UJ98 1225 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 CEP350Q5VT06 3117 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
LINC00640-202ENST00000555801 NKTRP30414 1462 aaKnown RBP7□□□□□ -1.29
LINC00640-202ENST00000555801 ARHGAP35Q9NRY4 1499 aa7□□□□□ -1.29
LINC00640-202ENST00000555801 ARHGAP23Q9P227 1491 aa7□□□□□ -1.29
LINC00640-202ENST00000555801 CFAP65Q6ZU64 1925 aaKnown RBP7□□□□□ -1.29
LINC00640-202ENST00000555801 CADPS2Q86UW7 1296 aa7□□□□□ -1.29
LINC00640-202ENST00000555801 FNBP4Q8N3X1 1017 aaPredicted RBP7□□□□□ -1.29
LINC00640-202ENST00000555801 FARP1Q9Y4F1 1045 aaPredicted RBP7□□□□□ -1.29
LINC00640-202ENST00000555801 ERVK-7P63135 1459 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 EZH2Q15910 746 aaKnown RBP6.99□□□□□ -1.29
LINC00640-202ENST00000555801 CDAN1Q8IWY9 1227 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 SEPT12Q8IYM1 358 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 ZNF579Q8NAF0 562 aaKnown RBP6.99□□□□□ -1.29
LINC00640-202ENST00000555801 CFDP1Q9UEE9 299 aaPredicted RBP6.99□□□□□ -1.29
LINC00640-202ENST00000555801 ABCC3O15438 1527 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 SLIT1O75093 1534 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 KIAA1107Q9UPP5 1409 aa6.99□□□□□ -1.29
LINC00640-202ENST00000555801 DHX29Q7Z478 1369 aaKnown RBP6.98□□□□□ -1.29
LINC00640-202ENST00000555801 FAM182BQ5T319 152 aa6.98□□□□□ -1.29
LINC00640-202ENST00000555801 CASKIN1Q8WXD9 1431 aa6.98□□□□□ -1.29
LINC00640-202ENST00000555801 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
LINC00640-202ENST00000555801 CCNB3Q8WWL7 1395 aa6.97□□□□□ -1.29
LINC00640-202ENST00000555801 TMEM2Q9UHN6 1383 aa6.97□□□□□ -1.29
LINC00640-202ENST00000555801 ASXL1Q8IXJ9 1541 aa6.97□□□□□ -1.29
LINC00640-202ENST00000555801 BRWD3Q6RI45 1802 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms