RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
SRP54-208ENST00000555557 CFAP70Q5T0N1 1121 aa14.45□□□□□ -0.1
SRP54-208ENST00000555557 ROCK2O75116 1388 aaKnown RBP14.45□□□□□ -0.1
SRP54-208ENST00000555557 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
SRP54-208ENST00000555557 PTPRMP28827 1452 aa14.44□□□□□ -0.1
SRP54-208ENST00000555557 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
SRP54-208ENST00000555557 NEXMIFQ5QGS0 1516 aa14.44□□□□□ -0.1
SRP54-208ENST00000555557 MYOM2P54296 1465 aa14.44□□□□□ -0.1
SRP54-208ENST00000555557 NLRP1Q9C000 1473 aa14.44□□□□□ -0.1
SRP54-208ENST00000555557 HSPA5P11021 654 aaKnown RBP14.44□□□□□ -0.1
SRP54-208ENST00000555557 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.18e-7■■■■■ 28.7
SRP54-208ENST00000555557 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
SRP54-208ENST00000555557 PPLO60437 1756 aa14.42□□□□□ -0.1
SRP54-208ENST00000555557 RIMS2Q9UQ26 1411 aa14.42□□□□□ -0.1
SRP54-208ENST00000555557 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
SRP54-208ENST00000555557 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
SRP54-208ENST00000555557 PIK3C2GO75747 1445 aa14.4□□□□□ -0.1
SRP54-208ENST00000555557 C14orf93Q9H972 538 aaKnown RBP14.4□□□□□ -0.1
SRP54-208ENST00000555557 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
SRP54-208ENST00000555557 USP47Q96K76 1375 aa14.39□□□□□ -0.11
SRP54-208ENST00000555557 UBR1Q8IWV7 1749 aa14.39□□□□□ -0.11
SRP54-208ENST00000555557 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
SRP54-208ENST00000555557 GPRASP1Q5JY77 1395 aa14.38□□□□□ -0.11
SRP54-208ENST00000555557 ZFYVE9O95405 1425 aa14.38□□□□□ -0.11
SRP54-208ENST00000555557 MYO3AQ8NEV4 1616 aa14.38□□□□□ -0.11
SRP54-208ENST00000555557 LTKP29376 864 aa14.38□□□□□ -0.11
SRP54-208ENST00000555557 THEMISQ8N1K5 641 aaPredicted RBP14.38□□□□□ -0.11
SRP54-208ENST00000555557 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
SRP54-208ENST00000555557 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SRP54-208ENST00000555557 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
SRP54-208ENST00000555557 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
SRP54-208ENST00000555557 BCANQ96GW7 911 aa14.35□□□□□ -0.11
SRP54-208ENST00000555557 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
SRP54-208ENST00000555557 KDM5AP29375 1690 aaKnown RBP14.34□□□□□ -0.11
SRP54-208ENST00000555557 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
SRP54-208ENST00000555557 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.11
SRP54-208ENST00000555557 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
SRP54-208ENST00000555557 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
SRP54-208ENST00000555557 KIAA1210Q9ULL0 1709 aa14.31□□□□□ -0.12
SRP54-208ENST00000555557 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
SRP54-208ENST00000555557 STK26Q9P289 416 aa14.31□□□□□ -0.12
SRP54-208ENST00000555557 SLIT1O75093 1534 aa14.31□□□□□ -0.12
SRP54-208ENST00000555557 SCAF11Q99590 1463 aaKnown RBP14.3□□□□□ -0.12
SRP54-208ENST00000555557 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
SRP54-208ENST00000555557 ALKQ9UM73 1620 aa14.3□□□□□ -0.12
SRP54-208ENST00000555557 LMTK3Q96Q04 1460 aa14.3□□□□□ -0.12
SRP54-208ENST00000555557 SLC26A8Q96RN1 970 aa14.29□□□□□ -0.12
SRP54-208ENST00000555557 WASHC2AQ641Q2 1341 aa14.29□□□□□ -0.12
SRP54-208ENST00000555557 LAMC1P11047 1609 aa14.29□□□□□ -0.12
SRP54-208ENST00000555557 PLEKHG1Q9ULL1 1385 aa14.29□□□□□ -0.12
SRP54-208ENST00000555557 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
SRP54-208ENST00000555557 ANKLE2Q86XL3 938 aa14.28□□□□□ -0.12
SRP54-208ENST00000555557 SETBP1Q9Y6X0 1596 aa14.28□□□□□ -0.12
SRP54-208ENST00000555557 ASXL1Q8IXJ9 1541 aa14.28□□□□□ -0.12
SRP54-208ENST00000555557 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.12
SRP54-208ENST00000555557 TESK2Q96S53 571 aa14.27□□□□□ -0.12
SRP54-208ENST00000555557 METP08581 1390 aa14.27□□□□□ -0.12
SRP54-208ENST00000555557 ZNF142P52746 1687 aaPredicted RBP14.27□□□□□ -0.12
SRP54-208ENST00000555557 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.13
SRP54-208ENST00000555557 NRXN3Q9Y4C0 1643 aa14.27□□□□□ -0.13
SRP54-208ENST00000555557 HSPA2P54652 639 aa14.26□□□□□ -0.13
SRP54-208ENST00000555557 ADAMTS13Q76LX8 1427 aa14.26□□□□□ -0.13
SRP54-208ENST00000555557 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
SRP54-208ENST00000555557 KIF7Q2M1P5 1343 aa14.25□□□□□ -0.13
SRP54-208ENST00000555557 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
SRP54-208ENST00000555557 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
SRP54-208ENST00000555557 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
SRP54-208ENST00000555557 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
SRP54-208ENST00000555557 CCDC7Q96M83 1385 aa14.24□□□□□ -0.13
SRP54-208ENST00000555557 CENPJQ9HC77 1338 aaPredicted RBP14.23□□□□□ -0.13
SRP54-208ENST00000555557 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
SRP54-208ENST00000555557 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
SRP54-208ENST00000555557 SETD1AO15047 1707 aaKnown RBP14.22□□□□□ -0.13
SRP54-208ENST00000555557 TMF1P82094 1093 aa14.21□□□□□ -0.13
SRP54-208ENST00000555557 WAPLQ7Z5K2 1190 aa14.21□□□□□ -0.13
SRP54-208ENST00000555557 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
SRP54-208ENST00000555557 LRPPRCP42704 1394 aaKnown RBP14.21□□□□□ -0.13
SRP54-208ENST00000555557 MED14O60244 1454 aa14.21□□□□□ -0.13
SRP54-208ENST00000555557 POGKQ9P215 609 aa14.2□□□□□ -0.14
SRP54-208ENST00000555557 ABCC11Q96J66 1382 aa14.19□□□□□ -0.14
SRP54-208ENST00000555557 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
SRP54-208ENST00000555557 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
SRP54-208ENST00000555557 PTPRUQ92729 1446 aa14.18□□□□□ -0.14
SRP54-208ENST00000555557 PLEKHH1Q9ULM0 1364 aa14.18□□□□□ -0.14
SRP54-208ENST00000555557 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
SRP54-208ENST00000555557 MINK1Q8N4C8 1332 aaPredicted RBP14.17□□□□□ -0.14
SRP54-208ENST00000555557 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
SRP54-208ENST00000555557 ROBO2Q9HCK4 1378 aa14.16□□□□□ -0.14
SRP54-208ENST00000555557 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
SRP54-208ENST00000555557 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
SRP54-208ENST00000555557 KCNA6P17658 529 aa14.14□□□□□ -0.15
SRP54-208ENST00000555557 TECPR2O15040 1411 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 DLC1Q96QB1 1528 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 SIRT1Q96EB6 747 aa14.13□□□□□ -0.15
SRP54-208ENST00000555557 CDCA8Q53HL2 280 aa14.12□□□□□ -0.15
SRP54-208ENST00000555557 EVC2Q86UK5 1308 aa14.12□□□□□ -0.15
SRP54-208ENST00000555557 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms