RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PRR20BP86481 221 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 PRR20AP86496 221 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
SNX6-204ENST00000555541 PCDHB3Q9Y5E6 796 aa11.58□□□□□ -0.56
SNX6-204ENST00000555541 TLL1O43897 1013 aa11.56□□□□□ -0.56
SNX6-204ENST00000555541 DGAT1O75907 488 aa11.56□□□□□ -0.56
SNX6-204ENST00000555541 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
SNX6-204ENST00000555541 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
SNX6-204ENST00000555541 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
SNX6-204ENST00000555541 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
SNX6-204ENST00000555541 LCE2AQ5TA79 106 aaPredicted RBP11.54□□□□□ -0.56
SNX6-204ENST00000555541 GDF9O60383 454 aa11.53□□□□□ -0.56
SNX6-204ENST00000555541 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
SNX6-204ENST00000555541 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
SNX6-204ENST00000555541 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
SNX6-204ENST00000555541 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
SNX6-204ENST00000555541 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
SNX6-204ENST00000555541 S1PR4O95977 384 aa11.5□□□□□ -0.57
SNX6-204ENST00000555541 PKDCCQ504Y2 493 aa11.5□□□□□ -0.57
SNX6-204ENST00000555541 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
SNX6-204ENST00000555541 DNAJB2P25686 324 aa11.49□□□□□ -0.57
SNX6-204ENST00000555541 PTGDRQ13258 359 aa11.49□□□□□ -0.57
SNX6-204ENST00000555541 MLLT3P42568 568 aaPredicted RBP11.48□□□□□ -0.57
SNX6-204ENST00000555541 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
SNX6-204ENST00000555541 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
SNX6-204ENST00000555541 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
SNX6-204ENST00000555541 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
SNX6-204ENST00000555541 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
SNX6-204ENST00000555541 SLC10A3P09131 477 aa11.45□□□□□ -0.58
SNX6-204ENST00000555541 ADH1BP00325 375 aa11.44□□□□□ -0.58
SNX6-204ENST00000555541 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
SNX6-204ENST00000555541 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
SNX6-204ENST00000555541 TNFRSF10AO00220 468 aa11.42□□□□□ -0.58
SNX6-204ENST00000555541 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
SNX6-204ENST00000555541 CFHP08603 1231 aa11.41□□□□□ -0.58
SNX6-204ENST00000555541 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
SNX6-204ENST00000555541 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
SNX6-204ENST00000555541 ST8SIA5O15466 376 aa11.4□□□□□ -0.58
SNX6-204ENST00000555541 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
SNX6-204ENST00000555541 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
SNX6-204ENST00000555541 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
SNX6-204ENST00000555541 CRIPAKQ8N1N5 446 aa11.37□□□□□ -0.59
SNX6-204ENST00000555541 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
SNX6-204ENST00000555541 SLC6A16Q9GZN6 736 aa11.36□□□□□ -0.59
SNX6-204ENST00000555541 NR1I2O75469 434 aa11.35□□□□□ -0.59
SNX6-204ENST00000555541 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
SNX6-204ENST00000555541 AVPP01185 164 aa11.33□□□□□ -0.6
SNX6-204ENST00000555541 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
SNX6-204ENST00000555541 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
SNX6-204ENST00000555541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
SNX6-204ENST00000555541 TOR4AQ9NXH8 423 aa11.32□□□□□ -0.6
SNX6-204ENST00000555541 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
SNX6-204ENST00000555541 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
SNX6-204ENST00000555541 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
SNX6-204ENST00000555541 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
SNX6-204ENST00000555541 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
SNX6-204ENST00000555541 SPSB2Q99619 263 aa11.28□□□□□ -0.6
SNX6-204ENST00000555541 RPIAP49247 311 aa11.27□□□□□ -0.61
SNX6-204ENST00000555541 FOXC1Q12948 553 aa11.25□□□□□ -0.61
SNX6-204ENST00000555541 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
SNX6-204ENST00000555541 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
SNX6-204ENST00000555541 FCHSD2O94868 740 aa11.23□□□□□ -0.61
SNX6-204ENST00000555541 MORN1Q5T089 497 aa11.23□□□□□ -0.61
SNX6-204ENST00000555541 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
SNX6-204ENST00000555541 GMPR2Q9P2T1 348 aaKnown RBP11.23□□□□□ -0.61
SNX6-204ENST00000555541 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
SNX6-204ENST00000555541 METTL3Q86U44 580 aaKnown RBP11.22□□□□□ -0.61
SNX6-204ENST00000555541 OATP04181 439 aa11.21□□□□□ -0.61
SNX6-204ENST00000555541 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
SNX6-204ENST00000555541 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
SNX6-204ENST00000555541 WFS1O76024 890 aa11.19□□□□□ -0.62
SNX6-204ENST00000555541 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
SNX6-204ENST00000555541 WIPF1O43516 503 aa11.18□□□□□ -0.62
SNX6-204ENST00000555541 AXIN1O15169 862 aa11.17□□□□□ -0.62
SNX6-204ENST00000555541 CD2BP2O95400 341 aaKnown RBP11.16□□□□□ -0.62
SNX6-204ENST00000555541 FUT2Q10981 343 aa11.15□□□□□ -0.62
SNX6-204ENST00000555541 PRDM9Q9NQV7 894 aa11.15□□□□□ -0.62
SNX6-204ENST00000555541 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
SNX6-204ENST00000555541 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
SNX6-204ENST00000555541 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
SNX6-204ENST00000555541 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
SNX6-204ENST00000555541 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
SNX6-204ENST00000555541 SEMA3EO15041 775 aa11.13□□□□□ -0.63
SNX6-204ENST00000555541 FECHP22830 423 aa11.13□□□□□ -0.63
SNX6-204ENST00000555541 HIC1Q14526 733 aa11.13□□□□□ -0.63
SNX6-204ENST00000555541 BRICD5Q6PL45 260 aa11.13□□□□□ -0.63
SNX6-204ENST00000555541 GPR37O15354 613 aa11.12□□□□□ -0.63
SNX6-204ENST00000555541 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
SNX6-204ENST00000555541 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
SNX6-204ENST00000555541 SMPD1P17405 629 aa11.11□□□□□ -0.63
SNX6-204ENST00000555541 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
SNX6-204ENST00000555541 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
SNX6-204ENST00000555541 GCGRP47871 477 aa11.1□□□□□ -0.63
SNX6-204ENST00000555541 WNT7AO00755 349 aa11.09□□□□□ -0.63
SNX6-204ENST00000555541 MSS51Q4VC12 460 aa11.09□□□□□ -0.63
SNX6-204ENST00000555541 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
SNX6-204ENST00000555541 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
SNX6-204ENST00000555541 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
SNX6-204ENST00000555541 ATP13A2Q9NQ11 1180 aa11.07□□□□□ -0.64
SNX6-204ENST00000555541 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms