RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
SHE-203ENST00000555188 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
SHE-203ENST00000555188 CWC15Q9P013 229 aaKnown RBP10.61□□□□□ -0.71
SHE-203ENST00000555188 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
SHE-203ENST00000555188 PANK3Q9H999 370 aa10.6□□□□□ -0.71
SHE-203ENST00000555188 GTF2E1P29083 439 aaPredicted RBP10.6□□□□□ -0.71
SHE-203ENST00000555188 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
SHE-203ENST00000555188 USP47Q96K76 1375 aa10.59□□□□□ -0.71
SHE-203ENST00000555188 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
SHE-203ENST00000555188 REC8O95072 547 aa10.59□□□□□ -0.71
SHE-203ENST00000555188 EIF3AQ14152 1382 aaKnown RBP10.58□□□□□ -0.72
SHE-203ENST00000555188 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 APAF1O14727 1248 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 MNS1Q8NEH6 495 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 MCM4P33991 863 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 NUP155O75694 1391 aa10.58□□□□□ -0.72
SHE-203ENST00000555188 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
SHE-203ENST00000555188 ZSCAN30Q86W11 494 aa10.57□□□□□ -0.72
SHE-203ENST00000555188 CCDC34Q96HJ3 373 aa10.57□□□□□ -0.72
SHE-203ENST00000555188 MAPK8IP2Q13387 824 aaPredicted RBP10.57□□□□□ -0.72
SHE-203ENST00000555188 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
SHE-203ENST00000555188 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
SHE-203ENST00000555188 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
SHE-203ENST00000555188 H3BQV1 296 aa10.56□□□□□ -0.72
SHE-203ENST00000555188 TPD52L1Q16890 204 aaPredicted RBP10.56□□□□□ -0.72
SHE-203ENST00000555188 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
SHE-203ENST00000555188 DZIP1LQ8IYY4 767 aaKnown RBP10.56□□□□□ -0.72
SHE-203ENST00000555188 TSPY26PQ9H489 355 aa10.56□□□□□ -0.72
SHE-203ENST00000555188 MBD3O95983 291 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 KIF3AQ9Y496 699 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
SHE-203ENST00000555188 BAZ1AQ9NRL2 1556 aaPredicted RBP10.55□□□□□ -0.72
SHE-203ENST00000555188 CREBRFQ8IUR6 639 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 CDCA7LQ96GN5 454 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
SHE-203ENST00000555188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.55□□□□□ -0.72
SHE-203ENST00000555188 PANK1Q8TE04 598 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
SHE-203ENST00000555188 AAMPQ13685 434 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 CUX2O14529 1486 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
SHE-203ENST00000555188 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 CCDC70Q6NSX1 233 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 SASS6Q6UVJ0 657 aa10.54□□□□□ -0.72
SHE-203ENST00000555188 ZHX1Q9UKY1 873 aaPredicted RBP10.54□□□□□ -0.72
SHE-203ENST00000555188 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
SHE-203ENST00000555188 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
SHE-203ENST00000555188 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
SHE-203ENST00000555188 PATL2C9JE40 543 aaKnown RBP10.53□□□□□ -0.72
SHE-203ENST00000555188 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
SHE-203ENST00000555188 ACBD3Q9H3P7 528 aa10.53□□□□□ -0.72
SHE-203ENST00000555188 CBX1P83916 185 aa10.52□□□□□ -0.72
SHE-203ENST00000555188 INTS3Q68E01 1043 aaKnown RBP10.52□□□□□ -0.72
SHE-203ENST00000555188 FAM184AQ8NB25 1140 aa10.52□□□□□ -0.72
SHE-203ENST00000555188 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
SHE-203ENST00000555188 IBSPP21815 317 aaPredicted RBP10.52□□□□□ -0.73
SHE-203ENST00000555188 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.73
SHE-203ENST00000555188 PDCL2Q8N4E4 241 aa10.52□□□□□ -0.73
SHE-203ENST00000555188 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
SHE-203ENST00000555188 HDGFL2Q7Z4V5 671 aaPredicted RBP10.51□□□□□ -0.73
SHE-203ENST00000555188 MPNDQ8N594 471 aa10.51□□□□□ -0.73
SHE-203ENST00000555188 FAM177BA6PVY3 158 aa10.51□□□□□ -0.73
SHE-203ENST00000555188 LETM1O95202 739 aaPredicted RBP10.51□□□□□ -0.73
SHE-203ENST00000555188 PDZRN3Q9UPQ7 1066 aa10.51□□□□□ -0.73
SHE-203ENST00000555188 VPS37CA5D8V6 355 aaPredicted RBP10.51□□□□□ -0.73
SHE-203ENST00000555188 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
SHE-203ENST00000555188 ANKRD30AQ9BXX3 1397 aa10.51□□□□□ -0.73
SHE-203ENST00000555188 TPM1P09493 284 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 ERICH4A6NGS2 130 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 H0YHG0 523 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 TRIM5Q9C035 493 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 CCDC112Q8NEF3 446 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 SMC3Q9UQE7 1217 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
SHE-203ENST00000555188 CDC45O75419 566 aa10.5□□□□□ -0.73
SHE-203ENST00000555188 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
SHE-203ENST00000555188 TSR1Q2NL82 804 aaKnown RBP10.49□□□□□ -0.73
SHE-203ENST00000555188 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
SHE-203ENST00000555188 RDXP35241 583 aaKnown RBP10.49□□□□□ -0.73
SHE-203ENST00000555188 SPC24Q8NBT2 197 aa10.49□□□□□ -0.73
SHE-203ENST00000555188 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
SHE-203ENST00000555188 CGNQ9P2M7 1197 aaKnown RBP10.49□□□□□ -0.73
SHE-203ENST00000555188 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
SHE-203ENST00000555188 MROH2BQ7Z745 1585 aa10.49□□□□□ -0.73
SHE-203ENST00000555188 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 PES1O00541 588 aaKnown RBP10.48□□□□□ -0.73
SHE-203ENST00000555188 CLCN1P35523 988 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 AK7Q96M32 723 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 RUSC2Q8N2Y8 1516 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 KANK1Q14678 1352 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
SHE-203ENST00000555188 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
SHE-203ENST00000555188 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms