RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 NUDT7P0C024 238 aa10.09□□□□□ -0.79
PSEN1-211ENST00000554995 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
PSEN1-211ENST00000554995 PRSS12P56730 875 aa10.08□□□□□ -0.8
PSEN1-211ENST00000554995 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
PSEN1-211ENST00000554995 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
PSEN1-211ENST00000554995 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
PSEN1-211ENST00000554995 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
PSEN1-211ENST00000554995 AXIN2Q9Y2T1 843 aa10.07□□□□□ -0.8
PSEN1-211ENST00000554995 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
PSEN1-211ENST00000554995 PROSER2Q86WR7 435 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-211ENST00000554995 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
PSEN1-211ENST00000554995 POM121Q96HA1 1249 aa10.04□□□□□ -0.8
PSEN1-211ENST00000554995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
PSEN1-211ENST00000554995 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
PSEN1-211ENST00000554995 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
PSEN1-211ENST00000554995 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
PSEN1-211ENST00000554995 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
PSEN1-211ENST00000554995 SPDYE5A6NIY4 337 aa10.02□□□□□ -0.81
PSEN1-211ENST00000554995 RCCD1A6NED2 376 aa10.01□□□□□ -0.81
PSEN1-211ENST00000554995 RAD21O60216 631 aa10.01□□□□□ -0.81
PSEN1-211ENST00000554995 RFC5P40937 340 aa10.01□□□□□ -0.81
PSEN1-211ENST00000554995 FNBP4Q8N3X1 1017 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-211ENST00000554995 LIMD1Q9UGP4 676 aa10.01□□□□□ -0.81
PSEN1-211ENST00000554995 COL9A1P20849 921 aa10□□□□□ -0.81
PSEN1-211ENST00000554995 IFFO2Q5TF58 517 aa10□□□□□ -0.81
PSEN1-211ENST00000554995 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
PSEN1-211ENST00000554995 BANK1Q8NDB2 785 aa10□□□□□ -0.81
PSEN1-211ENST00000554995 EYA1Q99502 592 aa10□□□□□ -0.81
PSEN1-211ENST00000554995 ZNF777Q9ULD5 760 aaPredicted RBP10□□□□□ -0.81
PSEN1-211ENST00000554995 HRO43593 1189 aa9.99□□□□□ -0.81
PSEN1-211ENST00000554995 CD46P15529 392 aa9.99□□□□□ -0.81
PSEN1-211ENST00000554995 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-211ENST00000554995 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
PSEN1-211ENST00000554995 SNRKQ9NRH2 765 aa9.99□□□□□ -0.81
PSEN1-211ENST00000554995 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
PSEN1-211ENST00000554995 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
PSEN1-211ENST00000554995 PPP4R3BQ5MIZ7 849 aa9.97□□□□□ -0.81
PSEN1-211ENST00000554995 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
PSEN1-211ENST00000554995 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
PSEN1-211ENST00000554995 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
PSEN1-211ENST00000554995 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
PSEN1-211ENST00000554995 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 SPTLC1O15269 473 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
PSEN1-211ENST00000554995 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
PSEN1-211ENST00000554995 TK2O00142 265 aa9.94□□□□□ -0.82
PSEN1-211ENST00000554995 ARHGAP33O14559 1287 aa9.94□□□□□ -0.82
PSEN1-211ENST00000554995 DNAJB2P25686 324 aa9.94□□□□□ -0.82
PSEN1-211ENST00000554995 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
PSEN1-211ENST00000554995 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
PSEN1-211ENST00000554995 HRCP23327 699 aa9.93□□□□□ -0.82
PSEN1-211ENST00000554995 PTPREP23469 700 aa9.93□□□□□ -0.82
PSEN1-211ENST00000554995 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-211ENST00000554995 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
PSEN1-211ENST00000554995 A0A0G2JS52 829 aa9.92□□□□□ -0.82
PSEN1-211ENST00000554995 PNMA3Q9UL41 463 aa9.92□□□□□ -0.82
PSEN1-211ENST00000554995 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 CSPP1Q1MSJ5 1256 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 MTMR14Q8NCE2 650 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 TATDN2Q93075 761 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 CCDC97Q96F63 343 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-211ENST00000554995 TMEM134Q9H6X4 195 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
PSEN1-211ENST00000554995 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
PSEN1-211ENST00000554995 KCNH8Q96L42 1107 aa9.9□□□□□ -0.82
PSEN1-211ENST00000554995 NDUFV2P19404 249 aa9.89□□□□□ -0.83
PSEN1-211ENST00000554995 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
PSEN1-211ENST00000554995 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-211ENST00000554995 LILRB3O75022 631 aa9.88□□□□□ -0.83
PSEN1-211ENST00000554995 GJA5P36382 358 aa9.88□□□□□ -0.83
PSEN1-211ENST00000554995 QPCTQ16769 361 aa9.88□□□□□ -0.83
PSEN1-211ENST00000554995 GDPD2Q9HCC8 539 aa9.88□□□□□ -0.83
PSEN1-211ENST00000554995 SMAPO00193 183 aa9.87□□□□□ -0.83
PSEN1-211ENST00000554995 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
PSEN1-211ENST00000554995 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
PSEN1-211ENST00000554995 RDH13Q8NBN7 331 aa9.86□□□□□ -0.83
PSEN1-211ENST00000554995 SOCS7O14512 581 aa9.85□□□□□ -0.83
PSEN1-211ENST00000554995 AP1G2O75843 785 aa9.85□□□□□ -0.83
PSEN1-211ENST00000554995 PROX2Q3B8N5 592 aa9.85□□□□□ -0.83
PSEN1-211ENST00000554995 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-211ENST00000554995 KDM4AO75164 1064 aa9.83□□□□□ -0.84
PSEN1-211ENST00000554995 Q6ZNB5 142 aa9.83□□□□□ -0.84
PSEN1-211ENST00000554995 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
PSEN1-211ENST00000554995 NUTM2BA6NNL0 878 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-211ENST00000554995 NUTM2EB1AL46 878 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-211ENST00000554995 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
PSEN1-211ENST00000554995 NUTM2DQ5VT03 806 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-211ENST00000554995 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
PSEN1-211ENST00000554995 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-211ENST00000554995 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
PSEN1-211ENST00000554995 KCNK17Q96T54 332 aa9.82□□□□□ -0.84
PSEN1-211ENST00000554995 ABL2P42684 1182 aa9.81□□□□□ -0.84
PSEN1-211ENST00000554995 PSEN2P49810 448 aa9.81□□□□□ -0.84
PSEN1-211ENST00000554995 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
PSEN1-211ENST00000554995 TBC1D2BQ9UPU7 963 aa9.81□□□□□ -0.84
PSEN1-211ENST00000554995 HOXA2O43364 376 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms