RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
ATXN3-231ENST00000554994 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
ATXN3-231ENST00000554994 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-231ENST00000554994 PPRC1Q5VV67 1664 aaKnown RBP8.3□□□□□ -1.08
ATXN3-231ENST00000554994 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
ATXN3-231ENST00000554994 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
ATXN3-231ENST00000554994 CUX1P39880 1505 aa8.29□□□□□ -1.08
ATXN3-231ENST00000554994 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
ATXN3-231ENST00000554994 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
ATXN3-231ENST00000554994 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
ATXN3-231ENST00000554994 ABCA5Q8WWZ7 1642 aa8.28□□□□□ -1.08
ATXN3-231ENST00000554994 NYAP1Q6ZVC0 841 aa8.27□□□□□ -1.09
ATXN3-231ENST00000554994 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
ATXN3-231ENST00000554994 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
ATXN3-231ENST00000554994 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
ATXN3-231ENST00000554994 GFRA3O60609 400 aa8.25□□□□□ -1.09
ATXN3-231ENST00000554994 PHF14O94880 888 aa8.25□□□□□ -1.09
ATXN3-231ENST00000554994 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
ATXN3-231ENST00000554994 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-231ENST00000554994 MFSD10Q14728 455 aa8.23□□□□□ -1.09
ATXN3-231ENST00000554994 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
ATXN3-231ENST00000554994 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
ATXN3-231ENST00000554994 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-231ENST00000554994 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-231ENST00000554994 HSPA2P54652 639 aa8.22□□□□□ -1.09
ATXN3-231ENST00000554994 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
ATXN3-231ENST00000554994 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
ATXN3-231ENST00000554994 KIF21BO75037 1637 aa8.21□□□□□ -1.09
ATXN3-231ENST00000554994 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
ATXN3-231ENST00000554994 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
ATXN3-231ENST00000554994 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
ATXN3-231ENST00000554994 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
ATXN3-231ENST00000554994 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
ATXN3-231ENST00000554994 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
ATXN3-231ENST00000554994 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
ATXN3-231ENST00000554994 PTPRMP28827 1452 aa8.2□□□□□ -1.1
ATXN3-231ENST00000554994 LCE2BO14633 110 aa8.2□□□□□ -1.1
ATXN3-231ENST00000554994 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-231ENST00000554994 EPAS1Q99814 870 aa8.19□□□□□ -1.1
ATXN3-231ENST00000554994 GLI2P10070 1586 aa8.18□□□□□ -1.1
ATXN3-231ENST00000554994 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
ATXN3-231ENST00000554994 DPYSL4O14531 572 aa8.17□□□□□ -1.1
ATXN3-231ENST00000554994 PPP4CP60510 307 aa8.17□□□□□ -1.1
ATXN3-231ENST00000554994 DDX12PQ92771 950 aa8.17□□□□□ -1.1
ATXN3-231ENST00000554994 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
ATXN3-231ENST00000554994 CADPS2Q86UW7 1296 aa8.16□□□□□ -1.1
ATXN3-231ENST00000554994 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
ATXN3-231ENST00000554994 TEX14Q8IWB6 1497 aa8.15□□□□□ -1.1
ATXN3-231ENST00000554994 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
ATXN3-231ENST00000554994 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
ATXN3-231ENST00000554994 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
ATXN3-231ENST00000554994 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
ATXN3-231ENST00000554994 SMAPO00193 183 aa8.13□□□□□ -1.11
ATXN3-231ENST00000554994 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
ATXN3-231ENST00000554994 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
ATXN3-231ENST00000554994 CUL7Q14999 1698 aa8.12□□□□□ -1.11
ATXN3-231ENST00000554994 MAP3K7O43318 606 aa8.12□□□□□ -1.11
ATXN3-231ENST00000554994 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
ATXN3-231ENST00000554994 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
ATXN3-231ENST00000554994 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-231ENST00000554994 RNF40O75150 1001 aa8.11□□□□□ -1.11
ATXN3-231ENST00000554994 NBR1Q14596 966 aa8.11□□□□□ -1.11
ATXN3-231ENST00000554994 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
ATXN3-231ENST00000554994 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
ATXN3-231ENST00000554994 PTPRGP23470 1445 aa8.11□□□□□ -1.11
ATXN3-231ENST00000554994 MADDQ8WXG6 1647 aa8.11□□□□□ -1.11
ATXN3-231ENST00000554994 MTRQ99707 1265 aa8.1□□□□□ -1.11
ATXN3-231ENST00000554994 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
ATXN3-231ENST00000554994 ERICH3Q5RHP9 1530 aa8.08□□□□□ -1.12
ATXN3-231ENST00000554994 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-231ENST00000554994 ZNF516Q92618 1163 aa8.08□□□□□ -1.12
ATXN3-231ENST00000554994 IL21Q9HBE4 155 aa8.08□□□□□ -1.12
ATXN3-231ENST00000554994 CAMK2BQ13554 666 aa8.07□□□□□ -1.12
ATXN3-231ENST00000554994 ARID4BQ4LE39 1312 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-231ENST00000554994 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
ATXN3-231ENST00000554994 RIMS1Q86UR5 1692 aaKnown RBP8.06□□□□□ -1.12
ATXN3-231ENST00000554994 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
ATXN3-231ENST00000554994 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.06□□□□□ -1.12
ATXN3-231ENST00000554994 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
ATXN3-231ENST00000554994 KIAA0586Q9BVV6 1533 aa8.06□□□□□ -1.12
ATXN3-231ENST00000554994 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
ATXN3-231ENST00000554994 V9GY48 417 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-231ENST00000554994 BCORL1Q5H9F3 1711 aa8.04□□□□□ -1.12
ATXN3-231ENST00000554994 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
ATXN3-231ENST00000554994 NKX2-3Q8TAU0 364 aa8.03□□□□□ -1.12
ATXN3-231ENST00000554994 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
ATXN3-231ENST00000554994 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
ATXN3-231ENST00000554994 PRSS12P56730 875 aa8.02□□□□□ -1.13
ATXN3-231ENST00000554994 TATDN2Q93075 761 aa8.02□□□□□ -1.13
ATXN3-231ENST00000554994 ZCCHC11Q5TAX3 1644 aaKnown RBP8.02□□□□□ -1.13
ATXN3-231ENST00000554994 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
ATXN3-231ENST00000554994 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
ATXN3-231ENST00000554994 UHRF1BP1LA0JNW5 1464 aa8.01□□□□□ -1.13
ATXN3-231ENST00000554994 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
ATXN3-231ENST00000554994 APLP1P51693 650 aa8.01□□□□□ -1.13
ATXN3-231ENST00000554994 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
ATXN3-231ENST00000554994 COPS2P61201 443 aa8.01□□□□□ -1.13
ATXN3-231ENST00000554994 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-231ENST00000554994 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
ATXN3-231ENST00000554994 MAGI3Q5TCQ9 1506 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms