RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
PSMC6-207ENST00000554952 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
PSMC6-207ENST00000554952 TET3O43151 1660 aa18.03■□□□□ 0.48
PSMC6-207ENST00000554952 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
PSMC6-207ENST00000554952 UNC13BO14795 1591 aa18.01■□□□□ 0.47
PSMC6-207ENST00000554952 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
PSMC6-207ENST00000554952 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
PSMC6-207ENST00000554952 KDM5AP29375 1690 aaKnown RBP18.01■□□□□ 0.47
PSMC6-207ENST00000554952 ADGRB3O60242 1522 aa18■□□□□ 0.47
PSMC6-207ENST00000554952 KCNA6P17658 529 aa18■□□□□ 0.47
PSMC6-207ENST00000554952 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
PSMC6-207ENST00000554952 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
PSMC6-207ENST00000554952 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
PSMC6-207ENST00000554952 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
PSMC6-207ENST00000554952 E9PCH4 1651 aa17.96■□□□□ 0.47
PSMC6-207ENST00000554952 ILDR2Q71H61 639 aa17.96■□□□□ 0.47
PSMC6-207ENST00000554952 RIMS2Q9UQ26 1411 aa17.96■□□□□ 0.47
PSMC6-207ENST00000554952 IQGAP3Q86VI3 1631 aa17.95■□□□□ 0.46
PSMC6-207ENST00000554952 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
PSMC6-207ENST00000554952 RBM33Q96EV2 1170 aaKnown RBP17.95■□□□□ 0.46
PSMC6-207ENST00000554952 MYO5BQ9ULV0 1848 aa17.94■□□□□ 0.46
PSMC6-207ENST00000554952 TMEM94Q12767 1356 aa17.93■□□□□ 0.46
PSMC6-207ENST00000554952 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
PSMC6-207ENST00000554952 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
PSMC6-207ENST00000554952 TMEM131LA2VDJ0 1609 aa17.93■□□□□ 0.46
PSMC6-207ENST00000554952 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
PSMC6-207ENST00000554952 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
PSMC6-207ENST00000554952 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
PSMC6-207ENST00000554952 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
PSMC6-207ENST00000554952 NAIPQ13075 1403 aa17.89■□□□□ 0.45
PSMC6-207ENST00000554952 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
PSMC6-207ENST00000554952 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
PSMC6-207ENST00000554952 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
PSMC6-207ENST00000554952 C14orf37Q86TY3 774 aa17.83■□□□□ 0.44
PSMC6-207ENST00000554952 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
PSMC6-207ENST00000554952 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
PSMC6-207ENST00000554952 MSH6P52701 1360 aa17.82■□□□□ 0.44
PSMC6-207ENST00000554952 SOCS7O14512 581 aa17.82■□□□□ 0.44
PSMC6-207ENST00000554952 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
PSMC6-207ENST00000554952 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
PSMC6-207ENST00000554952 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
PSMC6-207ENST00000554952 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
PSMC6-207ENST00000554952 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
PSMC6-207ENST00000554952 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
PSMC6-207ENST00000554952 NWD1Q149M9 1564 aa17.8■□□□□ 0.44
PSMC6-207ENST00000554952 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
PSMC6-207ENST00000554952 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
PSMC6-207ENST00000554952 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
PSMC6-207ENST00000554952 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
PSMC6-207ENST00000554952 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
PSMC6-207ENST00000554952 TRPM2O94759 1503 aa17.74■□□□□ 0.43
PSMC6-207ENST00000554952 CLTCL1P53675 1640 aa17.74■□□□□ 0.43
PSMC6-207ENST00000554952 ATF3P18847 181 aa17.74■□□□□ 0.43
PSMC6-207ENST00000554952 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
PSMC6-207ENST00000554952 NCOA3Q9Y6Q9 1424 aa17.73■□□□□ 0.43
PSMC6-207ENST00000554952 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
PSMC6-207ENST00000554952 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
PSMC6-207ENST00000554952 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.43
PSMC6-207ENST00000554952 METP08581 1390 aa17.71■□□□□ 0.43
PSMC6-207ENST00000554952 KIF1BO60333 1816 aa17.71■□□□□ 0.43
PSMC6-207ENST00000554952 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
PSMC6-207ENST00000554952 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
PSMC6-207ENST00000554952 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
PSMC6-207ENST00000554952 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
PSMC6-207ENST00000554952 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
PSMC6-207ENST00000554952 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
PSMC6-207ENST00000554952 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
PSMC6-207ENST00000554952 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
PSMC6-207ENST00000554952 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
PSMC6-207ENST00000554952 PHLPP1O60346 1717 aa17.62■□□□□ 0.41
PSMC6-207ENST00000554952 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
PSMC6-207ENST00000554952 SETD5Q9C0A6 1442 aa17.62■□□□□ 0.41
PSMC6-207ENST00000554952 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
PSMC6-207ENST00000554952 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
PSMC6-207ENST00000554952 JCADQ9P266 1359 aa17.61■□□□□ 0.41
PSMC6-207ENST00000554952 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
PSMC6-207ENST00000554952 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
PSMC6-207ENST00000554952 DCCP43146 1447 aa17.57■□□□□ 0.4
PSMC6-207ENST00000554952 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
PSMC6-207ENST00000554952 PPLO60437 1756 aa17.56■□□□□ 0.4
PSMC6-207ENST00000554952 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
PSMC6-207ENST00000554952 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
PSMC6-207ENST00000554952 STK26Q9P289 416 aa17.55■□□□□ 0.4
PSMC6-207ENST00000554952 MST1RQ04912 1400 aa17.55■□□□□ 0.4
PSMC6-207ENST00000554952 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
PSMC6-207ENST00000554952 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
PSMC6-207ENST00000554952 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
PSMC6-207ENST00000554952 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
PSMC6-207ENST00000554952 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
PSMC6-207ENST00000554952 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
PSMC6-207ENST00000554952 DDX17Q92841 729 aaKnown RBP17.53■□□□□ 0.4
PSMC6-207ENST00000554952 AHDC1Q5TGY3 1603 aaPredicted RBP17.52■□□□□ 0.4
PSMC6-207ENST00000554952 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
PSMC6-207ENST00000554952 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
PSMC6-207ENST00000554952 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
PSMC6-207ENST00000554952 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.4
PSMC6-207ENST00000554952 PTCH1Q13635 1447 aa17.51■□□□□ 0.39
PSMC6-207ENST00000554952 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
PSMC6-207ENST00000554952 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
PSMC6-207ENST00000554952 SETD1AO15047 1707 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms