RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	CCDC27	Q2M243	656 aa		5.22	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	ARSI	Q5FYB1	569 aa		5.22	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	SOX12	O15370	315 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	AMHR2	Q16671	573 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	FAM161A	Q3B820	660 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	CRISPLD2	Q9H0B8	497 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	IGSF5	Q9NSI5	407 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	BRPF3	Q9ULD4	1205 aa		5.21	□□□□□ -1.57
RALGAPA1-208	ENST00000554573	SCNN1A	P37088	669 aa		5.2	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	GLMN	Q92990	594 aa		5.2	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	KDM4A	O75164	1064 aa		5.2	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	PCMTD1	Q96MG8	357 aa	Predicted RBP	5.2	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	TAGLN	Q01995	201 aa	Known RBP	5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	CAMK2B	Q13554	666 aa		5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	POTEE	Q6S8J3	1075 aa		5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	CALR3	Q96L12	384 aa	Known RBP	5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	MAP2K5	Q13163	448 aa		5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	MFSD10	Q14728	455 aa		5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	TMED8	Q6PL24	325 aa	Predicted RBP	5.19	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	HMGB1	P09429	215 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	ZNF662	Q6ZS27	426 aa		5.18	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	ABL2	P42684	1182 aa		5.17	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	MRRF	Q96E11	262 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	TBC1D2B	Q9UPU7	963 aa		5.17	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	RSPH4A	Q5TD94	716 aa		5.16	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	MTMR14	Q8NCE2	650 aa		5.16	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	MINK1	Q8N4C8	1332 aa	Predicted RBP	5.16	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	TXNDC2	Q86VQ3	553 aa		5.16	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	BRD2	P25440	801 aa	Known RBP	5.15	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	AXIN2	Q9Y2T1	843 aa		5.15	□□□□□ -1.58
RALGAPA1-208	ENST00000554573	C2orf72	A6NCS6	295 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	TK2	O00142	265 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	NLRP6	P59044	892 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	CFAP70	Q5T0N1	1121 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	TRAF7	Q6Q0C0	670 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	CERS3	Q8IU89	383 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	GOPC	Q9HD26	462 aa		5.15	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	KIF3C	O14782	793 aa		5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	NUDT7	P0C024	238 aa		5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	MDM2	Q00987	491 aa	Predicted RBP	5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	SIRT1	Q96EB6	747 aa		5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	SRPK2	P78362	688 aa	Known RBP	5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	CCDC125	Q86Z20	511 aa		5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	ZNF526	Q8TF50	670 aa	Predicted RBP	5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	DDX12P	Q92771	950 aa		5.14	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	GNPAT	O15228	680 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	PDE4A	P27815	886 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	ADGRD1	Q6QNK2	874 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	BRD1	O95696	1058 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	SH3D19	Q5HYK7	790 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	BEGAIN	Q9BUH8	593 aa		5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	DSG2	Q14126	1118 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	PPP1R15B	Q5SWA1	713 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	UBE2Q2	Q8WVN8	375 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	OSBP	P22059	807 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	PDIA6	Q15084	440 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	GIMAP6	Q6P9H5	292 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	LHX6	Q9UPM6	363 aa		5.12	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	TMEM88B	A6NKF7	163 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	RFC5	P40937	340 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	CSPP1	Q1MSJ5	1256 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	HDGFL1	Q5TGJ6	251 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	MYSM1	Q5VVJ2	828 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	CDHR5	Q9HBB8	845 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	LIMD1	Q9UGP4	676 aa		5.11	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	ZNF592	Q92610	1267 aa		5.1	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	AMOTL2	Q9Y2J4	779 aa		5.1	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	PBXIP1	Q96AQ6	731 aa		5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	ACIN1	Q9UKV3	1341 aa	Known RBP	5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	HR	O43593	1189 aa		5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	TBC1D12	O60347	775 aa		5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	ZNF16	P17020	682 aa	Predicted RBP	5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	SSTR3	P32745	418 aa	Predicted RBP	5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	C9orf131	Q5VYM1	1079 aa		5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	KCTD12	Q96CX2	325 aa	Known RBP	5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	PCDHGA4	Q9Y5G9	962 aa		5.09	□□□□□ -1.59
RALGAPA1-208	ENST00000554573	LCE2B	O14633	110 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	FOSB	P53539	338 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	CADPS	Q9ULU8	1353 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	SPDYE5	A6NIY4	337 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	GPR37L1	O60883	481 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	KCNA1	Q09470	495 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	QPCT	Q16769	361 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	PHLDB3	Q6NSJ2	640 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	UCN2	Q96RP3	112 aa		5.08	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	UPF1	Q92900	1129 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	RBM47	A0AV96	593 aa	Known RBP	5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	ZNF787	Q6DD87	383 aa		5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	GIPC2	Q8TF65	315 aa		5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	SLAIN2	Q9P270	581 aa		5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.07	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	PPP1R15A	O75807	674 aa	Predicted RBP	5.06	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	LMOD1	P29536	600 aa	Predicted RBP	5.06	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	VAC14	Q08AM6	782 aa		5.06	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	TMUB1	Q9BVT8	246 aa		5.06	□□□□□ -1.6
RALGAPA1-208	ENST00000554573	SLC34A2	O95436	690 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms