RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 RNF40O75150 1001 aa11.52□□□□□ -0.57
ATXN3-225ENST00000554214 ZMYND10O75800 440 aa11.52□□□□□ -0.57
ATXN3-225ENST00000554214 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
ATXN3-225ENST00000554214 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
ATXN3-225ENST00000554214 SLC4A3P48751 1232 aa11.5□□□□□ -0.57
ATXN3-225ENST00000554214 BARGINQ6ZT62 677 aa11.5□□□□□ -0.57
ATXN3-225ENST00000554214 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
ATXN3-225ENST00000554214 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
ATXN3-225ENST00000554214 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
ATXN3-225ENST00000554214 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
ATXN3-225ENST00000554214 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
ATXN3-225ENST00000554214 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
ATXN3-225ENST00000554214 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
ATXN3-225ENST00000554214 SLC10A3P09131 477 aa11.4□□□□□ -0.58
ATXN3-225ENST00000554214 APLP1P51693 650 aa11.4□□□□□ -0.58
ATXN3-225ENST00000554214 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
ATXN3-225ENST00000554214 DDX11L8A8MPP1 907 aa11.38□□□□□ -0.59
ATXN3-225ENST00000554214 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-225ENST00000554214 RDH13Q8NBN7 331 aa11.36□□□□□ -0.59
ATXN3-225ENST00000554214 AK7Q96M32 723 aa11.36□□□□□ -0.59
ATXN3-225ENST00000554214 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
ATXN3-225ENST00000554214 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
ATXN3-225ENST00000554214 CFHP08603 1231 aa11.34□□□□□ -0.59
ATXN3-225ENST00000554214 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
ATXN3-225ENST00000554214 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
ATXN3-225ENST00000554214 CLCN1P35523 988 aa11.33□□□□□ -0.6
ATXN3-225ENST00000554214 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
ATXN3-225ENST00000554214 KCNC4Q03721 635 aa11.32□□□□□ -0.6
ATXN3-225ENST00000554214 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
ATXN3-225ENST00000554214 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
ATXN3-225ENST00000554214 TRIM66O15016 1216 aa11.31□□□□□ -0.6
ATXN3-225ENST00000554214 ACTN4O43707 911 aaKnown RBP11.31□□□□□ -0.6
ATXN3-225ENST00000554214 MTRQ99707 1265 aa11.31□□□□□ -0.6
ATXN3-225ENST00000554214 PCDHB3Q9Y5E6 796 aa11.3□□□□□ -0.6
ATXN3-225ENST00000554214 GCGRP47871 477 aa11.29□□□□□ -0.6
ATXN3-225ENST00000554214 COPS2P61201 443 aa11.29□□□□□ -0.6
ATXN3-225ENST00000554214 AMHR2Q16671 573 aa11.29□□□□□ -0.6
ATXN3-225ENST00000554214 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
ATXN3-225ENST00000554214 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
ATXN3-225ENST00000554214 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
ATXN3-225ENST00000554214 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-225ENST00000554214 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
ATXN3-225ENST00000554214 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
ATXN3-225ENST00000554214 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-225ENST00000554214 CD46P15529 392 aa11.26□□□□□ -0.61
ATXN3-225ENST00000554214 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-225ENST00000554214 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
ATXN3-225ENST00000554214 FUT2Q10981 343 aa11.23□□□□□ -0.61
ATXN3-225ENST00000554214 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
ATXN3-225ENST00000554214 ZPR1O75312 459 aa11.22□□□□□ -0.61
ATXN3-225ENST00000554214 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
ATXN3-225ENST00000554214 PDE4DQ08499 809 aa11.22□□□□□ -0.61
ATXN3-225ENST00000554214 NR1I2O75469 434 aa11.21□□□□□ -0.61
ATXN3-225ENST00000554214 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
ATXN3-225ENST00000554214 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
ATXN3-225ENST00000554214 SCUBE3Q8IX30 993 aa11.2□□□□□ -0.62
ATXN3-225ENST00000554214 PARP9Q8IXQ6 854 aa11.2□□□□□ -0.62
ATXN3-225ENST00000554214 KDM4AO75164 1064 aa11.19□□□□□ -0.62
ATXN3-225ENST00000554214 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
ATXN3-225ENST00000554214 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
ATXN3-225ENST00000554214 MORN1Q5T089 497 aa11.18□□□□□ -0.62
ATXN3-225ENST00000554214 A0A0G2JS52 829 aa11.17□□□□□ -0.62
ATXN3-225ENST00000554214 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
ATXN3-225ENST00000554214 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
ATXN3-225ENST00000554214 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
ATXN3-225ENST00000554214 MS4A1P11836 297 aa11.14□□□□□ -0.63
ATXN3-225ENST00000554214 USP46P62068 366 aa11.14□□□□□ -0.63
ATXN3-225ENST00000554214 TLL1O43897 1013 aa11.12□□□□□ -0.63
ATXN3-225ENST00000554214 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
ATXN3-225ENST00000554214 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
ATXN3-225ENST00000554214 SPSB2Q99619 263 aa11.1□□□□□ -0.63
ATXN3-225ENST00000554214 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
ATXN3-225ENST00000554214 HOXA2O43364 376 aa11.09□□□□□ -0.63
ATXN3-225ENST00000554214 FMNL1O95466 1100 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-225ENST00000554214 ADH1BP00325 375 aa11.09□□□□□ -0.63
ATXN3-225ENST00000554214 HLA-CQ95604 372 aa11.09□□□□□ -0.63
ATXN3-225ENST00000554214 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
ATXN3-225ENST00000554214 GGCXP38435 758 aa11.08□□□□□ -0.64
ATXN3-225ENST00000554214 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
ATXN3-225ENST00000554214 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-225ENST00000554214 Q3C1V9 767 aa11.07□□□□□ -0.64
ATXN3-225ENST00000554214 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-225ENST00000554214 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
ATXN3-225ENST00000554214 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
ATXN3-225ENST00000554214 SLC6A16Q9GZN6 736 aa11.06□□□□□ -0.64
ATXN3-225ENST00000554214 RGS20O76081 388 aa11.05□□□□□ -0.64
ATXN3-225ENST00000554214 S1PR4O95977 384 aa11.05□□□□□ -0.64
ATXN3-225ENST00000554214 NDUFV2P19404 249 aa11.05□□□□□ -0.64
ATXN3-225ENST00000554214 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
ATXN3-225ENST00000554214 KDM4CQ9H3R0 1056 aa11.05□□□□□ -0.64
ATXN3-225ENST00000554214 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
ATXN3-225ENST00000554214 FDX1P10109 184 aa11.04□□□□□ -0.64
ATXN3-225ENST00000554214 DIXDC1Q155Q3 683 aa11.04□□□□□ -0.64
ATXN3-225ENST00000554214 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-225ENST00000554214 FAM160A2Q8N612 972 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-225ENST00000554214 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
ATXN3-225ENST00000554214 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-225ENST00000554214 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
ATXN3-225ENST00000554214 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
ATXN3-225ENST00000554214 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms