RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
LINC00520-202ENST00000554196 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
LINC00520-202ENST00000554196 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
LINC00520-202ENST00000554196 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
LINC00520-202ENST00000554196 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
LINC00520-202ENST00000554196 SETBP1Q9Y6X0 1596 aa12.92□□□□□ -0.34
LINC00520-202ENST00000554196 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
LINC00520-202ENST00000554196 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
LINC00520-202ENST00000554196 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
LINC00520-202ENST00000554196 MYO3AQ8NEV4 1616 aa12.9□□□□□ -0.34
LINC00520-202ENST00000554196 NEXMIFQ5QGS0 1516 aa12.89□□□□□ -0.35
LINC00520-202ENST00000554196 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
LINC00520-202ENST00000554196 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
LINC00520-202ENST00000554196 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
LINC00520-202ENST00000554196 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
LINC00520-202ENST00000554196 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
LINC00520-202ENST00000554196 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
LINC00520-202ENST00000554196 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
LINC00520-202ENST00000554196 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
LINC00520-202ENST00000554196 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
LINC00520-202ENST00000554196 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
LINC00520-202ENST00000554196 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
LINC00520-202ENST00000554196 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
LINC00520-202ENST00000554196 C3P01024 1663 aa12.84□□□□□ -0.35
LINC00520-202ENST00000554196 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
LINC00520-202ENST00000554196 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
LINC00520-202ENST00000554196 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
LINC00520-202ENST00000554196 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
LINC00520-202ENST00000554196 UBR1Q8IWV7 1749 aa12.82□□□□□ -0.36
LINC00520-202ENST00000554196 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
LINC00520-202ENST00000554196 QRICH2Q9H0J4 1663 aa12.81□□□□□ -0.36
LINC00520-202ENST00000554196 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
LINC00520-202ENST00000554196 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
LINC00520-202ENST00000554196 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
LINC00520-202ENST00000554196 MIER1Q8N108 512 aa12.8□□□□□ -0.36
LINC00520-202ENST00000554196 ESF1Q9H501 851 aaKnown RBP12.8□□□□□ -0.36
LINC00520-202ENST00000554196 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
LINC00520-202ENST00000554196 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
LINC00520-202ENST00000554196 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
LINC00520-202ENST00000554196 MYOM1P52179 1685 aa12.77□□□□□ -0.36
LINC00520-202ENST00000554196 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
LINC00520-202ENST00000554196 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
LINC00520-202ENST00000554196 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
LINC00520-202ENST00000554196 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
LINC00520-202ENST00000554196 RIMS1Q86UR5 1692 aaKnown RBP12.76□□□□□ -0.37
LINC00520-202ENST00000554196 ANP32CO43423 234 aa12.75□□□□□ -0.37
LINC00520-202ENST00000554196 ADAMTSL3P82987 1691 aa12.75□□□□□ -0.37
LINC00520-202ENST00000554196 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
LINC00520-202ENST00000554196 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
LINC00520-202ENST00000554196 ZNF142P52746 1687 aaPredicted RBP12.74□□□□□ -0.37
LINC00520-202ENST00000554196 TNRQ92752 1358 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 ZBTB22O15209 634 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 VGFO15240 615 aaPredicted RBP12.74□□□□□ -0.37
LINC00520-202ENST00000554196 IDI1Q13907 227 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
LINC00520-202ENST00000554196 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
LINC00520-202ENST00000554196 MLECQ14165 292 aa12.73□□□□□ -0.37
LINC00520-202ENST00000554196 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
LINC00520-202ENST00000554196 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
LINC00520-202ENST00000554196 NRXN3Q9Y4C0 1643 aa12.72□□□□□ -0.37
LINC00520-202ENST00000554196 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
LINC00520-202ENST00000554196 ALKQ9UM73 1620 aa12.71□□□□□ -0.37
LINC00520-202ENST00000554196 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.38
LINC00520-202ENST00000554196 C11orf95C9JLR9 678 aaPredicted RBP12.7□□□□□ -0.38
LINC00520-202ENST00000554196 TMF1P82094 1093 aa12.7□□□□□ -0.38
LINC00520-202ENST00000554196 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
LINC00520-202ENST00000554196 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
LINC00520-202ENST00000554196 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
LINC00520-202ENST00000554196 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
LINC00520-202ENST00000554196 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
LINC00520-202ENST00000554196 TESK2Q96S53 571 aa12.69□□□□□ -0.38
LINC00520-202ENST00000554196 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
LINC00520-202ENST00000554196 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
LINC00520-202ENST00000554196 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
LINC00520-202ENST00000554196 DIP2AQ14689 1571 aa12.68□□□□□ -0.38
LINC00520-202ENST00000554196 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
LINC00520-202ENST00000554196 SLIT1O75093 1534 aa12.67□□□□□ -0.38
LINC00520-202ENST00000554196 CEP170BQ9Y4F5 1589 aaPredicted RBP12.66□□□□□ -0.38
LINC00520-202ENST00000554196 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00520-202ENST00000554196 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
LINC00520-202ENST00000554196 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
LINC00520-202ENST00000554196 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
LINC00520-202ENST00000554196 CPS1P31327 1500 aa12.64□□□□□ -0.39
LINC00520-202ENST00000554196 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
LINC00520-202ENST00000554196 ARHGAP23Q9P227 1491 aa12.64□□□□□ -0.39
LINC00520-202ENST00000554196 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
LINC00520-202ENST00000554196 PTPRMP28827 1452 aa12.63□□□□□ -0.39
LINC00520-202ENST00000554196 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
LINC00520-202ENST00000554196 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
LINC00520-202ENST00000554196 TULP4Q9NRJ4 1543 aa12.62□□□□□ -0.39
LINC00520-202ENST00000554196 PRKRIP1Q9H875 184 aaPredicted RBP12.61□□□□□ -0.39
LINC00520-202ENST00000554196 ANKRD26Q9UPS8 1709 aa12.59□□□□□ -0.39
LINC00520-202ENST00000554196 LRPPRCP42704 1394 aaKnown RBP12.59□□□□□ -0.39
LINC00520-202ENST00000554196 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
LINC00520-202ENST00000554196 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
LINC00520-202ENST00000554196 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
LINC00520-202ENST00000554196 TECPR2O15040 1411 aa12.59□□□□□ -0.39
LINC00520-202ENST00000554196 ADGRB2O60241 1585 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms