RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
PTPN21-204ENST00000554178 ABCC5O15440 1437 aa15.4■□□□□ 0.06
PTPN21-204ENST00000554178 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
PTPN21-204ENST00000554178 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
PTPN21-204ENST00000554178 DAPK1P53355 1430 aa15.39■□□□□ 0.05
PTPN21-204ENST00000554178 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
PTPN21-204ENST00000554178 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
PTPN21-204ENST00000554178 CHD2O14647 1828 aaKnown RBP15.38■□□□□ 0.05
PTPN21-204ENST00000554178 TET3O43151 1660 aa15.38■□□□□ 0.05
PTPN21-204ENST00000554178 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
PTPN21-204ENST00000554178 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
PTPN21-204ENST00000554178 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
PTPN21-204ENST00000554178 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
PTPN21-204ENST00000554178 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
PTPN21-204ENST00000554178 KANK1Q14678 1352 aa15.35■□□□□ 0.05
PTPN21-204ENST00000554178 NKTRP30414 1462 aaKnown RBP15.34■□□□□ 0.05
PTPN21-204ENST00000554178 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
PTPN21-204ENST00000554178 POTEAQ6S8J7 498 aa15.33■□□□□ 0.04
PTPN21-204ENST00000554178 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
PTPN21-204ENST00000554178 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
PTPN21-204ENST00000554178 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
PTPN21-204ENST00000554178 TMEM131LA2VDJ0 1609 aa15.3■□□□□ 0.04
PTPN21-204ENST00000554178 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
PTPN21-204ENST00000554178 E9PCH4 1651 aa15.29■□□□□ 0.04
PTPN21-204ENST00000554178 NOS1P29475 1434 aa15.29■□□□□ 0.04
PTPN21-204ENST00000554178 IDI1Q13907 227 aa15.29■□□□□ 0.04
PTPN21-204ENST00000554178 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
PTPN21-204ENST00000554178 BCANQ96GW7 911 aa15.29■□□□□ 0.04
PTPN21-204ENST00000554178 LRP6O75581 1613 aa15.28■□□□□ 0.04
PTPN21-204ENST00000554178 MSH6P52701 1360 aa15.27■□□□□ 0.04
PTPN21-204ENST00000554178 ANKRD30AQ9BXX3 1397 aa15.27■□□□□ 0.04
PTPN21-204ENST00000554178 KCNA6P17658 529 aa15.27■□□□□ 0.04
PTPN21-204ENST00000554178 SHPRHQ149N8 1683 aa15.27■□□□□ 0.03
PTPN21-204ENST00000554178 UNC13BO14795 1591 aa15.26■□□□□ 0.03
PTPN21-204ENST00000554178 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
PTPN21-204ENST00000554178 ADGRL2O95490 1459 aa15.24■□□□□ 0.03
PTPN21-204ENST00000554178 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
PTPN21-204ENST00000554178 ABCB7O75027 752 aa15.22■□□□□ 0.03
PTPN21-204ENST00000554178 PPP1R15AO75807 674 aaPredicted RBP15.22■□□□□ 0.03
PTPN21-204ENST00000554178 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
PTPN21-204ENST00000554178 NUTM2DQ5VT03 806 aaPredicted RBP15.21■□□□□ 0.03
PTPN21-204ENST00000554178 JCADQ9P266 1359 aa15.21■□□□□ 0.02
PTPN21-204ENST00000554178 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.02
PTPN21-204ENST00000554178 AHDC1Q5TGY3 1603 aaPredicted RBP15.21■□□□□ 0.02
PTPN21-204ENST00000554178 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
PTPN21-204ENST00000554178 DIP2AQ14689 1571 aa15.2■□□□□ 0.02
PTPN21-204ENST00000554178 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
PTPN21-204ENST00000554178 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
PTPN21-204ENST00000554178 APLP2Q06481 763 aa15.19■□□□□ 0.02
PTPN21-204ENST00000554178 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
PTPN21-204ENST00000554178 NRXN3Q9Y4C0 1643 aa15.18■□□□□ 0.02
PTPN21-204ENST00000554178 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
PTPN21-204ENST00000554178 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
PTPN21-204ENST00000554178 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
PTPN21-204ENST00000554178 SLAIN2Q9P270 581 aa15.18■□□□□ 0.02
PTPN21-204ENST00000554178 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
PTPN21-204ENST00000554178 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
PTPN21-204ENST00000554178 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
PTPN21-204ENST00000554178 NALCNQ8IZF0 1738 aa15.17■□□□□ 0.02
PTPN21-204ENST00000554178 NHSL1Q5SYE7 1610 aa15.17■□□□□ 0.02
PTPN21-204ENST00000554178 TRPM2O94759 1503 aa15.17■□□□□ 0.02
PTPN21-204ENST00000554178 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
PTPN21-204ENST00000554178 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
PTPN21-204ENST00000554178 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-204ENST00000554178 SLC52A1Q9NWF4 448 aa15.14■□□□□ 0.01
PTPN21-204ENST00000554178 ASXL1Q8IXJ9 1541 aa15.13■□□□□ 0.01
PTPN21-204ENST00000554178 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
PTPN21-204ENST00000554178 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
PTPN21-204ENST00000554178 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
PTPN21-204ENST00000554178 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
PTPN21-204ENST00000554178 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
PTPN21-204ENST00000554178 SPATA31A6Q5VVP1 1343 aa15.09■□□□□ 0.01
PTPN21-204ENST00000554178 KIF1BO60333 1816 aa15.08■□□□□ 0
PTPN21-204ENST00000554178 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
PTPN21-204ENST00000554178 CLTCL1P53675 1640 aa15.07■□□□□ 0
PTPN21-204ENST00000554178 ATF3P18847 181 aa15.07■□□□□ 0
PTPN21-204ENST00000554178 UPF1Q92900 1129 aaKnown RBP eCLIP15.06■□□□□ 0
PTPN21-204ENST00000554178 TBX22Q9Y458 520 aa15.06■□□□□ 0
PTPN21-204ENST00000554178 BRINP3Q76B58 766 aa15.05■□□□□ -0
PTPN21-204ENST00000554178 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
PTPN21-204ENST00000554178 MST1RQ04912 1400 aa15.05■□□□□ -0
PTPN21-204ENST00000554178 NCOA3Q9Y6Q9 1424 aa15.05■□□□□ -0
PTPN21-204ENST00000554178 RGS12O14924 1447 aa15.04■□□□□ -0
PTPN21-204ENST00000554178 ZNF772Q68DY9 489 aaPredicted RBP15.04■□□□□ -0
PTPN21-204ENST00000554178 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
PTPN21-204ENST00000554178 AFF2P51816 1311 aa15.03■□□□□ -0
PTPN21-204ENST00000554178 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
PTPN21-204ENST00000554178 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
PTPN21-204ENST00000554178 NEXMIFQ5QGS0 1516 aa15.02■□□□□ -0
PTPN21-204ENST00000554178 DCCP43146 1447 aa15.02■□□□□ -0
PTPN21-204ENST00000554178 PIK3R4Q99570 1358 aa15.02■□□□□ -0
PTPN21-204ENST00000554178 ITGAEP38570 1179 aa15.02■□□□□ -0
PTPN21-204ENST00000554178 HDGFP51858 240 aaKnown RBP15.02■□□□□ -0
PTPN21-204ENST00000554178 C19orf44Q9H6X5 657 aa15.02■□□□□ -0
PTPN21-204ENST00000554178 NUP155O75694 1391 aa15□□□□□ -0.01
PTPN21-204ENST00000554178 RXRBP28702 533 aa15□□□□□ -0.01
PTPN21-204ENST00000554178 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
PTPN21-204ENST00000554178 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
PTPN21-204ENST00000554178 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
PTPN21-204ENST00000554178 METP08581 1390 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms