RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ORAI2Q96SN7 254 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 KIF21BO75037 1637 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 SYCP2Q9BX26 1530 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 C7P10643 843 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 CFAP70Q5T0N1 1121 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 CHRNA2Q15822 529 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 SLC39A7Q92504 469 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 MPHOSPH9Q99550 1183 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 SCUBE2Q9NQ36 999 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 C9orf84Q5VXU9 1444 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 A2MP01023 1474 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 VGFO15240 615 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-205ENST00000554081 DHX29Q7Z478 1369 aaKnown RBP3.54□□□□□ -1.84
PRPF39-205ENST00000554081 ZFYVE16Q7Z3T8 1539 aa3.54□□□□□ -1.84
PRPF39-205ENST00000554081 GPATCH8Q9UKJ3 1502 aaKnown RBP3.54□□□□□ -1.84
PRPF39-205ENST00000554081 TAOK2Q9UL54 1235 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 MAPKBP1O60336 1514 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.53□□□□□ -1.84
PRPF39-205ENST00000554081 CADPS2Q86UW7 1296 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 SLC52A1Q9NWF4 448 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 MSH6P52701 1360 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 TMEM94Q12767 1356 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 ANKRD50Q9ULJ7 1429 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 KIF14Q15058 1648 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 PCF11O94913 1555 aaKnown RBP3.53□□□□□ -1.84
PRPF39-205ENST00000554081 FAM135AQ9P2D6 1515 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 UHRF1BP1LA0JNW5 1464 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 MYOM3Q5VTT5 1437 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.53□□□□□ -1.84
PRPF39-205ENST00000554081 PRAM1Q96QH2 718 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 QTRT2Q9H974 415 aaKnown RBP3.53□□□□□ -1.84
PRPF39-205ENST00000554081 PRDM11Q9NQV5 511 aa3.53□□□□□ -1.84
PRPF39-205ENST00000554081 NEO1Q92859 1461 aa3.52□□□□□ -1.85
PRPF39-205ENST00000554081 HECW1Q76N89 1606 aa3.52□□□□□ -1.85
PRPF39-205ENST00000554081 HECW2Q9P2P5 1572 aa3.52□□□□□ -1.85
PRPF39-205ENST00000554081 PSDA5PKW4 1024 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-205ENST00000554081 BCL11AQ9H165 835 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 C19orf44Q9H6X5 657 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 ZNF330Q9Y3S2 320 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-205ENST00000554081 FARP1Q9Y4F1 1045 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-205ENST00000554081 ABCA8O94911 1581 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 TTC37Q6PGP7 1564 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 MAGI3Q5TCQ9 1506 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 POTEJP0CG39 1038 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 ABTB2Q8N961 1025 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 CABP2Q9NPB3 220 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 USP21Q9UK80 565 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 LRRC9Q6ZRR7 1453 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 RXRBP28702 533 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 NLRP6P59044 892 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 CARD11Q9BXL7 1154 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 CLEC11AQ9Y240 323 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 CAMSAP2Q08AD1 1489 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 CCDC141Q6ZP82 1450 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 RIMS1Q86UR5 1692 aaKnown RBP3.51□□□□□ -1.85
PRPF39-205ENST00000554081 FGD6Q6ZV73 1430 aa3.51□□□□□ -1.85
PRPF39-205ENST00000554081 EFCAB5A4FU69 1503 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 ARHGEF12Q9NZN5 1544 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 CTTNBP2Q8WZ74 1663 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 PDE3BQ13370 1112 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 FAM98CQ17RN3 349 aaKnown RBP3.5□□□□□ -1.85
PRPF39-205ENST00000554081 SSUH2Q9Y2M2 353 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 KIF13AQ9H1H9 1805 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 FYCO1Q9BQS8 1478 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 MADDQ8WXG6 1647 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 TRIM26Q12899 539 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-205ENST00000554081 KRT28Q7Z3Y7 464 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 NLRP2Q9NX02 1062 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 SUPT6HQ7KZ85 1726 aaKnown RBP3.5□□□□□ -1.85
PRPF39-205ENST00000554081 ADGRF5Q8IZF2 1346 aa3.5□□□□□ -1.85
PRPF39-205ENST00000554081 TULP1O00294 542 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-205ENST00000554081 ASTLQ6HA08 431 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-205ENST00000554081 DDX54Q8TDD1 881 aaKnown RBP3.49□□□□□ -1.85
PRPF39-205ENST00000554081 LRRC59Q96AG4 307 aaKnown RBP3.49□□□□□ -1.85
PRPF39-205ENST00000554081 SHROOM2Q13796 1616 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 NBPF1Q3BBV0 1214 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 TOM1L2Q6ZVM7 507 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 DEFB132Q7Z7B7 95 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 TONSLQ96HA7 1378 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 NPHP1O15259 732 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 FBLN1P23142 703 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 POTEAQ6S8J7 498 aa3.49□□□□□ -1.85
PRPF39-205ENST00000554081 AFF2P51816 1311 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 CCDC144AA2RUR9 1427 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 ABCC5O15440 1437 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 NPHP4O75161 1426 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-205ENST00000554081 CHADLQ6NUI6 762 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 BTG4Q9NY30 223 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 PHF8Q9UPP1 1060 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 ACSBG1Q96GR2 724 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 BCL11BQ9C0K0 894 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-205ENST00000554081 METRNQ9UJH8 293 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 SALL2Q9Y467 1007 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-205ENST00000554081 SOCS7O14512 581 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 L3MBTL2Q969R5 705 aa3.48□□□□□ -1.85
PRPF39-205ENST00000554081 DAPK1P53355 1430 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 ERBINQ96RT1 1412 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 CNTLNQ9NXG0 1405 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 PRR29P0C7W0 189 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 AMPHP49418 695 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms