RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 ARIH1Q9Y4X5 557 aaPredicted RBP8.82□□□□□ -1
LINC00648-201ENST00000553747 NECTIN2Q92692 538 aa8.81□□□□□ -1
LINC00648-201ENST00000553747 EYA1Q99502 592 aa8.81□□□□□ -1
LINC00648-201ENST00000553747 MYT1Q01538 1121 aa8.8□□□□□ -1
LINC00648-201ENST00000553747 PKDCCQ504Y2 493 aa8.8□□□□□ -1
LINC00648-201ENST00000553747 SPRYD7Q5W111 196 aa8.78□□□□□ -1
LINC00648-201ENST00000553747 TNFRSF10AO00220 468 aa8.77□□□□□ -1.01
LINC00648-201ENST00000553747 S1PR4O95977 384 aa8.77□□□□□ -1.01
LINC00648-201ENST00000553747 SLC4A3P48751 1232 aa8.77□□□□□ -1.01
LINC00648-201ENST00000553747 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
LINC00648-201ENST00000553747 FAM187AA6NFU0 413 aa8.75□□□□□ -1.01
LINC00648-201ENST00000553747 ZNF598Q86UK7 904 aaKnown RBP8.75□□□□□ -1.01
LINC00648-201ENST00000553747 DGAT1O75907 488 aa8.74□□□□□ -1.01
LINC00648-201ENST00000553747 FAM161AQ3B820 660 aa8.74□□□□□ -1.01
LINC00648-201ENST00000553747 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
LINC00648-201ENST00000553747 PRR14Q9BWN1 585 aa8.74□□□□□ -1.01
LINC00648-201ENST00000553747 MLLT3P42568 568 aaPredicted RBP8.73□□□□□ -1.01
LINC00648-201ENST00000553747 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
LINC00648-201ENST00000553747 ST8SIA5O15466 376 aa8.72□□□□□ -1.01
LINC00648-201ENST00000553747 GDF9O60383 454 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 DNAJB2P25686 324 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PRR20EP86478 221 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PRR20CP86479 221 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PRR20DP86480 221 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PRR20BP86481 221 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PRR20AP86496 221 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 PLA2G2CQ5R387 149 aa8.71□□□□□ -1.02
LINC00648-201ENST00000553747 CFHP08603 1231 aa8.7□□□□□ -1.02
LINC00648-201ENST00000553747 ACTN4O43707 911 aaKnown RBP8.69□□□□□ -1.02
LINC00648-201ENST00000553747 KMT5BQ4FZB7 885 aa8.69□□□□□ -1.02
LINC00648-201ENST00000553747 TMEM134Q9H6X4 195 aa8.69□□□□□ -1.02
LINC00648-201ENST00000553747 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
LINC00648-201ENST00000553747 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
LINC00648-201ENST00000553747 ADH1BP00325 375 aa8.67□□□□□ -1.02
LINC00648-201ENST00000553747 SLC10A3P09131 477 aa8.67□□□□□ -1.02
LINC00648-201ENST00000553747 FOXC1Q12948 553 aa8.67□□□□□ -1.02
LINC00648-201ENST00000553747 PTGDRQ13258 359 aa8.67□□□□□ -1.02
LINC00648-201ENST00000553747 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
LINC00648-201ENST00000553747 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
LINC00648-201ENST00000553747 AAASQ9NRG9 546 aa8.66□□□□□ -1.02
LINC00648-201ENST00000553747 PLCB2Q00722 1185 aa8.65□□□□□ -1.02
LINC00648-201ENST00000553747 DACH1Q9UI36 760 aa8.65□□□□□ -1.02
LINC00648-201ENST00000553747 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
LINC00648-201ENST00000553747 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 NR1I2O75469 434 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 PKD2L1Q9P0L9 805 aa8.63□□□□□ -1.03
LINC00648-201ENST00000553747 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
LINC00648-201ENST00000553747 SCUBE3Q8IX30 993 aa8.61□□□□□ -1.03
LINC00648-201ENST00000553747 KCNV2Q8TDN2 545 aa8.58□□□□□ -1.04
LINC00648-201ENST00000553747 SPSB2Q99619 263 aa8.58□□□□□ -1.04
LINC00648-201ENST00000553747 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
LINC00648-201ENST00000553747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.56□□□□□ -1.04
LINC00648-201ENST00000553747 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
LINC00648-201ENST00000553747 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
LINC00648-201ENST00000553747 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
LINC00648-201ENST00000553747 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
LINC00648-201ENST00000553747 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
LINC00648-201ENST00000553747 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
LINC00648-201ENST00000553747 AXIN1O15169 862 aa8.52□□□□□ -1.05
LINC00648-201ENST00000553747 WFS1O76024 890 aa8.52□□□□□ -1.05
LINC00648-201ENST00000553747 FCHSD2O94868 740 aa8.52□□□□□ -1.05
LINC00648-201ENST00000553747 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
LINC00648-201ENST00000553747 RPIAP49247 311 aa8.51□□□□□ -1.05
LINC00648-201ENST00000553747 CRIPAKQ8N1N5 446 aa8.51□□□□□ -1.05
LINC00648-201ENST00000553747 PRDM9Q9NQV7 894 aa8.51□□□□□ -1.05
LINC00648-201ENST00000553747 AVPP01185 164 aa8.5□□□□□ -1.05
LINC00648-201ENST00000553747 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
LINC00648-201ENST00000553747 FAM160A2Q8N612 972 aaPredicted RBP8.5□□□□□ -1.05
LINC00648-201ENST00000553747 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
LINC00648-201ENST00000553747 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
LINC00648-201ENST00000553747 CD2BP2O95400 341 aaKnown RBP8.49□□□□□ -1.05
LINC00648-201ENST00000553747 OATP04181 439 aa8.49□□□□□ -1.05
LINC00648-201ENST00000553747 MORN1Q5T089 497 aa8.49□□□□□ -1.05
LINC00648-201ENST00000553747 SEMA3EO15041 775 aa8.48□□□□□ -1.05
LINC00648-201ENST00000553747 FUT2Q10981 343 aa8.48□□□□□ -1.05
LINC00648-201ENST00000553747 RSPH4AQ5TD94 716 aa8.48□□□□□ -1.05
LINC00648-201ENST00000553747 METTL3Q86U44 580 aaKnown RBP8.48□□□□□ -1.05
LINC00648-201ENST00000553747 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
LINC00648-201ENST00000553747 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
LINC00648-201ENST00000553747 DDX11L8A8MPP1 907 aa8.47□□□□□ -1.05
LINC00648-201ENST00000553747 NFX1Q12986 1120 aaKnown RBP8.47□□□□□ -1.05
LINC00648-201ENST00000553747 SLC27A5Q9Y2P5 690 aa8.47□□□□□ -1.05
LINC00648-201ENST00000553747 FECHP22830 423 aa8.46□□□□□ -1.06
LINC00648-201ENST00000553747 FMNL1O95466 1100 aaPredicted RBP8.45□□□□□ -1.06
LINC00648-201ENST00000553747 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
LINC00648-201ENST00000553747 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
LINC00648-201ENST00000553747 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
LINC00648-201ENST00000553747 ATP6V1AP38606 617 aa8.43□□□□□ -1.06
LINC00648-201ENST00000553747 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
LINC00648-201ENST00000553747 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
LINC00648-201ENST00000553747 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
LINC00648-201ENST00000553747 SMPD1P17405 629 aa8.42□□□□□ -1.06
LINC00648-201ENST00000553747 RBM26Q5T8P6 1007 aaKnown RBP8.42□□□□□ -1.06
LINC00648-201ENST00000553747 RNF19BQ6ZMZ0 732 aa8.42□□□□□ -1.06
LINC00648-201ENST00000553747 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
LINC00648-201ENST00000553747 J3QL48 77 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms