RNA–Protein interactions for RNA: ENST00000553496.1

LINC01146-201, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-201ENST00000553496 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
LINC01146-201ENST00000553496 EPRSP07814 1512 aaKnown RBP12.92□□□□□ -0.34
LINC01146-201ENST00000553496 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
LINC01146-201ENST00000553496 EVI5O60447 810 aa12.9□□□□□ -0.34
LINC01146-201ENST00000553496 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
LINC01146-201ENST00000553496 ZCCHC11Q5TAX3 1644 aaKnown RBP12.9□□□□□ -0.34
LINC01146-201ENST00000553496 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
LINC01146-201ENST00000553496 HCSTQ9UBK5 93 aa12.89□□□□□ -0.35
LINC01146-201ENST00000553496 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
LINC01146-201ENST00000553496 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
LINC01146-201ENST00000553496 KIF13AQ9H1H9 1805 aa12.87□□□□□ -0.35
LINC01146-201ENST00000553496 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
LINC01146-201ENST00000553496 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
LINC01146-201ENST00000553496 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
LINC01146-201ENST00000553496 CLIP1P30622 1438 aa12.84□□□□□ -0.35
LINC01146-201ENST00000553496 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
LINC01146-201ENST00000553496 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.35
LINC01146-201ENST00000553496 PLEKHD1A6NEE1 506 aa12.83□□□□□ -0.36
LINC01146-201ENST00000553496 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
LINC01146-201ENST00000553496 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
LINC01146-201ENST00000553496 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
LINC01146-201ENST00000553496 CASKIN1Q8WXD9 1431 aa12.82□□□□□ -0.36
LINC01146-201ENST00000553496 PTPREP23469 700 aa12.82□□□□□ -0.36
LINC01146-201ENST00000553496 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
LINC01146-201ENST00000553496 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
LINC01146-201ENST00000553496 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
LINC01146-201ENST00000553496 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
LINC01146-201ENST00000553496 CD109Q6YHK3 1445 aa12.81□□□□□ -0.36
LINC01146-201ENST00000553496 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
LINC01146-201ENST00000553496 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
LINC01146-201ENST00000553496 PLA2G2EQ9NZK7 142 aa12.79□□□□□ -0.36
LINC01146-201ENST00000553496 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
LINC01146-201ENST00000553496 CAMK2BQ13554 666 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 CFAP43Q8NDM7 1665 aa12.77□□□□□ -0.37
LINC01146-201ENST00000553496 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
LINC01146-201ENST00000553496 ABCA9Q8IUA7 1624 aa12.76□□□□□ -0.37
LINC01146-201ENST00000553496 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
LINC01146-201ENST00000553496 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
LINC01146-201ENST00000553496 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
LINC01146-201ENST00000553496 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
LINC01146-201ENST00000553496 NEO1Q92859 1461 aa12.73□□□□□ -0.37
LINC01146-201ENST00000553496 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
LINC01146-201ENST00000553496 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
LINC01146-201ENST00000553496 KDM6BO15054 1643 aa12.71□□□□□ -0.37
LINC01146-201ENST00000553496 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
LINC01146-201ENST00000553496 PLCH2O75038 1416 aa12.7□□□□□ -0.38
LINC01146-201ENST00000553496 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
LINC01146-201ENST00000553496 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
LINC01146-201ENST00000553496 PHF14O94880 888 aa12.69□□□□□ -0.38
LINC01146-201ENST00000553496 COL9A1P20849 921 aa12.69□□□□□ -0.38
LINC01146-201ENST00000553496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01146-201ENST00000553496 DPYSL4O14531 572 aa12.68□□□□□ -0.38
LINC01146-201ENST00000553496 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
LINC01146-201ENST00000553496 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
LINC01146-201ENST00000553496 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
LINC01146-201ENST00000553496 PCF11O94913 1555 aaKnown RBP12.68□□□□□ -0.38
LINC01146-201ENST00000553496 PTPN5P54829 565 aa12.67□□□□□ -0.38
LINC01146-201ENST00000553496 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
LINC01146-201ENST00000553496 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
LINC01146-201ENST00000553496 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
LINC01146-201ENST00000553496 FANCAO15360 1455 aa12.65□□□□□ -0.38
LINC01146-201ENST00000553496 VPS8Q8N3P4 1428 aa12.64□□□□□ -0.39
LINC01146-201ENST00000553496 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
LINC01146-201ENST00000553496 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
LINC01146-201ENST00000553496 AKNAQ7Z591 1439 aa12.63□□□□□ -0.39
LINC01146-201ENST00000553496 WNT2BQ93097 391 aa12.63□□□□□ -0.39
LINC01146-201ENST00000553496 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
LINC01146-201ENST00000553496 KIF14Q15058 1648 aa12.62□□□□□ -0.39
LINC01146-201ENST00000553496 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
LINC01146-201ENST00000553496 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
LINC01146-201ENST00000553496 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
LINC01146-201ENST00000553496 TTC37Q6PGP7 1564 aa12.61□□□□□ -0.39
LINC01146-201ENST00000553496 EPAS1Q99814 870 aa12.61□□□□□ -0.39
LINC01146-201ENST00000553496 DENND4BO75064 1496 aaPredicted RBP12.6□□□□□ -0.39
LINC01146-201ENST00000553496 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
LINC01146-201ENST00000553496 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
LINC01146-201ENST00000553496 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
LINC01146-201ENST00000553496 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
LINC01146-201ENST00000553496 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
LINC01146-201ENST00000553496 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
LINC01146-201ENST00000553496 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
LINC01146-201ENST00000553496 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
LINC01146-201ENST00000553496 DDX12PQ92771 950 aa12.57□□□□□ -0.4
LINC01146-201ENST00000553496 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
LINC01146-201ENST00000553496 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
LINC01146-201ENST00000553496 ZMYM4Q5VZL5 1548 aa12.56□□□□□ -0.4
LINC01146-201ENST00000553496 EHBP1L1Q8N3D4 1523 aa12.56□□□□□ -0.4
LINC01146-201ENST00000553496 POGZQ7Z3K3 1410 aa12.55□□□□□ -0.4
LINC01146-201ENST00000553496 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
LINC01146-201ENST00000553496 GPATCH8Q9UKJ3 1502 aaKnown RBP12.55□□□□□ -0.4
LINC01146-201ENST00000553496 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
LINC01146-201ENST00000553496 PDIA6Q15084 440 aa12.54□□□□□ -0.4
LINC01146-201ENST00000553496 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
LINC01146-201ENST00000553496 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
LINC01146-201ENST00000553496 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
LINC01146-201ENST00000553496 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms