RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-209ENST00000553280 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
SCFD1-209ENST00000553280 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
SCFD1-209ENST00000553280 HIC1Q14526 733 aa10.01□□□□□ -0.81
SCFD1-209ENST00000553280 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
SCFD1-209ENST00000553280 FECHP22830 423 aa10□□□□□ -0.81
SCFD1-209ENST00000553280 TRIM66O15016 1216 aa9.99□□□□□ -0.81
SCFD1-209ENST00000553280 ARXQ96QS3 562 aa9.99□□□□□ -0.81
SCFD1-209ENST00000553280 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-209ENST00000553280 GNPATO15228 680 aa9.98□□□□□ -0.81
SCFD1-209ENST00000553280 GPR37O15354 613 aa9.98□□□□□ -0.81
SCFD1-209ENST00000553280 DNAJB2P25686 324 aa9.98□□□□□ -0.81
SCFD1-209ENST00000553280 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
SCFD1-209ENST00000553280 ITGBL1O95965 494 aaPredicted RBP9.97□□□□□ -0.81
SCFD1-209ENST00000553280 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
SCFD1-209ENST00000553280 PDE4DQ08499 809 aa9.96□□□□□ -0.82
SCFD1-209ENST00000553280 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
SCFD1-209ENST00000553280 APLP1P51693 650 aa9.95□□□□□ -0.82
SCFD1-209ENST00000553280 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
SCFD1-209ENST00000553280 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
SCFD1-209ENST00000553280 SLC4A3P48751 1232 aa9.94□□□□□ -0.82
SCFD1-209ENST00000553280 KCNC4Q03721 635 aa9.94□□□□□ -0.82
SCFD1-209ENST00000553280 TMEM134Q9H6X4 195 aa9.94□□□□□ -0.82
SCFD1-209ENST00000553280 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-209ENST00000553280 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
SCFD1-209ENST00000553280 A0A0G2JS52 829 aa9.92□□□□□ -0.82
SCFD1-209ENST00000553280 OATP04181 439 aa9.92□□□□□ -0.82
SCFD1-209ENST00000553280 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
SCFD1-209ENST00000553280 MTRQ99707 1265 aa9.91□□□□□ -0.82
SCFD1-209ENST00000553280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
SCFD1-209ENST00000553280 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
SCFD1-209ENST00000553280 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
SCFD1-209ENST00000553280 NECTIN2Q92692 538 aa9.89□□□□□ -0.83
SCFD1-209ENST00000553280 IRF6O14896 467 aa9.88□□□□□ -0.83
SCFD1-209ENST00000553280 COPS2P61201 443 aa9.88□□□□□ -0.83
SCFD1-209ENST00000553280 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
SCFD1-209ENST00000553280 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
SCFD1-209ENST00000553280 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
SCFD1-209ENST00000553280 SLC10A3P09131 477 aa9.86□□□□□ -0.83
SCFD1-209ENST00000553280 CFHP08603 1231 aa9.85□□□□□ -0.83
SCFD1-209ENST00000553280 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
SCFD1-209ENST00000553280 AMHR2Q16671 573 aa9.84□□□□□ -0.83
SCFD1-209ENST00000553280 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
SCFD1-209ENST00000553280 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
SCFD1-209ENST00000553280 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
SCFD1-209ENST00000553280 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
SCFD1-209ENST00000553280 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
SCFD1-209ENST00000553280 PRR14Q9BWN1 585 aa9.82□□□□□ -0.84
SCFD1-209ENST00000553280 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
SCFD1-209ENST00000553280 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
SCFD1-209ENST00000553280 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
SCFD1-209ENST00000553280 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
SCFD1-209ENST00000553280 ACTN4O43707 911 aaKnown RBP9.8□□□□□ -0.84
SCFD1-209ENST00000553280 RDH13Q8NBN7 331 aa9.8□□□□□ -0.84
SCFD1-209ENST00000553280 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
SCFD1-209ENST00000553280 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
SCFD1-209ENST00000553280 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
SCFD1-209ENST00000553280 ZPR1O75312 459 aa9.78□□□□□ -0.84
SCFD1-209ENST00000553280 RGS20O76081 388 aa9.77□□□□□ -0.85
SCFD1-209ENST00000553280 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
SCFD1-209ENST00000553280 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
SCFD1-209ENST00000553280 ZMYND15Q9H091 742 aa9.77□□□□□ -0.85
SCFD1-209ENST00000553280 TLL1O43897 1013 aa9.76□□□□□ -0.85
SCFD1-209ENST00000553280 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
SCFD1-209ENST00000553280 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-209ENST00000553280 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
SCFD1-209ENST00000553280 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
SCFD1-209ENST00000553280 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
SCFD1-209ENST00000553280 FUT2Q10981 343 aa9.71□□□□□ -0.86
SCFD1-209ENST00000553280 NR1I2O75469 434 aa9.7□□□□□ -0.86
SCFD1-209ENST00000553280 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-209ENST00000553280 RSPH6AQ9H0K4 717 aa9.7□□□□□ -0.86
SCFD1-209ENST00000553280 GGCXP38435 758 aa9.69□□□□□ -0.86
SCFD1-209ENST00000553280 GCGRP47871 477 aa9.69□□□□□ -0.86
SCFD1-209ENST00000553280 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
SCFD1-209ENST00000553280 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
SCFD1-209ENST00000553280 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-209ENST00000553280 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
SCFD1-209ENST00000553280 S1PR4O95977 384 aa9.67□□□□□ -0.86
SCFD1-209ENST00000553280 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
SCFD1-209ENST00000553280 MS4A1P11836 297 aa9.66□□□□□ -0.86
SCFD1-209ENST00000553280 CD46P15529 392 aa9.66□□□□□ -0.86
SCFD1-209ENST00000553280 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
SCFD1-209ENST00000553280 MORN1Q5T089 497 aa9.66□□□□□ -0.86
SCFD1-209ENST00000553280 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
SCFD1-209ENST00000553280 ADH1BP00325 375 aa9.65□□□□□ -0.86
SCFD1-209ENST00000553280 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
SCFD1-209ENST00000553280 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
SCFD1-209ENST00000553280 FLIIQ13045 1269 aa9.64□□□□□ -0.87
SCFD1-209ENST00000553280 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
SCFD1-209ENST00000553280 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
SCFD1-209ENST00000553280 CLCN1P35523 988 aa9.63□□□□□ -0.87
SCFD1-209ENST00000553280 SPSB2Q99619 263 aa9.63□□□□□ -0.87
SCFD1-209ENST00000553280 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-209ENST00000553280 SLC6A16Q9GZN6 736 aa9.62□□□□□ -0.87
SCFD1-209ENST00000553280 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-209ENST00000553280 KDM4AO75164 1064 aa9.6□□□□□ -0.87
SCFD1-209ENST00000553280 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
SCFD1-209ENST00000553280 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
SCFD1-209ENST00000553280 HLA-CQ95604 372 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms