RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 LMTK2Q8IWU2 1503 aa12.63□□□□□ -0.39
PCNX1-203ENST00000553272 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.63□□□□□ -0.39
PCNX1-203ENST00000553272 MSH6P52701 1360 aa12.63□□□□□ -0.39
PCNX1-203ENST00000553272 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
PCNX1-203ENST00000553272 RGS12O14924 1447 aa12.62□□□□□ -0.39
PCNX1-203ENST00000553272 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
PCNX1-203ENST00000553272 KANK1Q14678 1352 aa12.62□□□□□ -0.39
PCNX1-203ENST00000553272 NOS1P29475 1434 aa12.62□□□□□ -0.39
PCNX1-203ENST00000553272 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
PCNX1-203ENST00000553272 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
PCNX1-203ENST00000553272 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
PCNX1-203ENST00000553272 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
PCNX1-203ENST00000553272 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
PCNX1-203ENST00000553272 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
PCNX1-203ENST00000553272 RXRBP28702 533 aa12.59□□□□□ -0.39
PCNX1-203ENST00000553272 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
PCNX1-203ENST00000553272 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
PCNX1-203ENST00000553272 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
PCNX1-203ENST00000553272 DAPK1P53355 1430 aa12.58□□□□□ -0.4
PCNX1-203ENST00000553272 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.4
PCNX1-203ENST00000553272 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
PCNX1-203ENST00000553272 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
PCNX1-203ENST00000553272 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
PCNX1-203ENST00000553272 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
PCNX1-203ENST00000553272 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
PCNX1-203ENST00000553272 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
PCNX1-203ENST00000553272 BCANQ96GW7 911 aa12.56□□□□□ -0.4
PCNX1-203ENST00000553272 AFF2P51816 1311 aa12.56□□□□□ -0.4
PCNX1-203ENST00000553272 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
PCNX1-203ENST00000553272 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
PCNX1-203ENST00000553272 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
PCNX1-203ENST00000553272 EP400Q96L91 3159 aa12.55□□□□□ -0.4
PCNX1-203ENST00000553272 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
PCNX1-203ENST00000553272 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
PCNX1-203ENST00000553272 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
PCNX1-203ENST00000553272 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
PCNX1-203ENST00000553272 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.4
PCNX1-203ENST00000553272 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
PCNX1-203ENST00000553272 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
PCNX1-203ENST00000553272 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
PCNX1-203ENST00000553272 C19orf44Q9H6X5 657 aa12.52□□□□□ -0.41
PCNX1-203ENST00000553272 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
PCNX1-203ENST00000553272 ASXL1Q8IXJ9 1541 aa12.51□□□□□ -0.41
PCNX1-203ENST00000553272 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
PCNX1-203ENST00000553272 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
PCNX1-203ENST00000553272 ADGRL2O95490 1459 aa12.49□□□□□ -0.41
PCNX1-203ENST00000553272 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCNX1-203ENST00000553272 C8orf37Q96NL8 207 aa12.49□□□□□ -0.41
PCNX1-203ENST00000553272 PIK3R4Q99570 1358 aa12.48□□□□□ -0.41
PCNX1-203ENST00000553272 ATF3P18847 181 aa12.48□□□□□ -0.41
PCNX1-203ENST00000553272 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
PCNX1-203ENST00000553272 ANKRD50Q9ULJ7 1429 aa12.46□□□□□ -0.41
PCNX1-203ENST00000553272 ATAD2Q6PL18 1390 aa12.46□□□□□ -0.41
PCNX1-203ENST00000553272 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
PCNX1-203ENST00000553272 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
PCNX1-203ENST00000553272 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
PCNX1-203ENST00000553272 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
PCNX1-203ENST00000553272 SETD5Q9C0A6 1442 aa12.45□□□□□ -0.42
PCNX1-203ENST00000553272 LRP5O75197 1615 aa12.44□□□□□ -0.42
PCNX1-203ENST00000553272 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
PCNX1-203ENST00000553272 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
PCNX1-203ENST00000553272 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
PCNX1-203ENST00000553272 MARF1Q9Y4F3 1742 aaKnown RBP12.44□□□□□ -0.42
PCNX1-203ENST00000553272 DCCP43146 1447 aa12.44□□□□□ -0.42
PCNX1-203ENST00000553272 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
PCNX1-203ENST00000553272 APLP2Q06481 763 aa12.43□□□□□ -0.42
PCNX1-203ENST00000553272 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
PCNX1-203ENST00000553272 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
PCNX1-203ENST00000553272 TRPM2O94759 1503 aa12.42□□□□□ -0.42
PCNX1-203ENST00000553272 E9PCH4 1651 aa12.42□□□□□ -0.42
PCNX1-203ENST00000553272 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
PCNX1-203ENST00000553272 UNC13BO14795 1591 aa12.41□□□□□ -0.42
PCNX1-203ENST00000553272 MST1RQ04912 1400 aa12.41□□□□□ -0.42
PCNX1-203ENST00000553272 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
PCNX1-203ENST00000553272 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
PCNX1-203ENST00000553272 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
PCNX1-203ENST00000553272 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
PCNX1-203ENST00000553272 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
PCNX1-203ENST00000553272 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
PCNX1-203ENST00000553272 METP08581 1390 aa12.36□□□□□ -0.43
PCNX1-203ENST00000553272 USP21Q9UK80 565 aa12.34□□□□□ -0.43
PCNX1-203ENST00000553272 ATRNO75882 1429 aa12.34□□□□□ -0.43
PCNX1-203ENST00000553272 ADGRL3Q9HAR2 1447 aa12.34□□□□□ -0.43
PCNX1-203ENST00000553272 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
PCNX1-203ENST00000553272 LAMC1P11047 1609 aa12.33□□□□□ -0.43
PCNX1-203ENST00000553272 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.43
PCNX1-203ENST00000553272 FOXD1Q16676 465 aa12.33□□□□□ -0.44
PCNX1-203ENST00000553272 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
PCNX1-203ENST00000553272 NUP155O75694 1391 aa12.31□□□□□ -0.44
PCNX1-203ENST00000553272 GLI3P10071 1580 aa12.31□□□□□ -0.44
PCNX1-203ENST00000553272 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
PCNX1-203ENST00000553272 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
PCNX1-203ENST00000553272 DEFB132Q7Z7B7 95 aa12.3□□□□□ -0.44
PCNX1-203ENST00000553272 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
PCNX1-203ENST00000553272 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
PCNX1-203ENST00000553272 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
PCNX1-203ENST00000553272 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
PCNX1-203ENST00000553272 ZNF326Q5BKZ1 582 aaKnown RBP12.28□□□□□ -0.44
PCNX1-203ENST00000553272 ORAI2Q96SN7 254 aa12.28□□□□□ -0.44
PCNX1-203ENST00000553272 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms