RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, human

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-229	ENST00000552818	PPL	O60437	1756 aa		13.79	□□□□□ -0.2
PFKM-229	ENST00000552818	MKRN4P	Q13434	485 aa	Predicted RBP	13.79	□□□□□ -0.2
PFKM-229	ENST00000552818	POLR1A	O95602	1720 aa	Predicted RBP	13.77	□□□□□ -0.21
PFKM-229	ENST00000552818	GGT6	Q6P531	493 aa		13.77	□□□□□ -0.21
PFKM-229	ENST00000552818	RALGAPB	Q86X10	1494 aa		13.76	□□□□□ -0.21
PFKM-229	ENST00000552818	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.76	□□□□□ -0.21
PFKM-229	ENST00000552818	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.76	□□□□□ -0.21
PFKM-229	ENST00000552818	CNTLN	Q9NXG0	1405 aa		13.75	□□□□□ -0.21
PFKM-229	ENST00000552818	TRH	P20396	242 aa	Predicted RBP	13.75	□□□□□ -0.21
PFKM-229	ENST00000552818	BCAN	Q96GW7	911 aa		13.75	□□□□□ -0.21
PFKM-229	ENST00000552818	LAMC1	P11047	1609 aa		13.75	□□□□□ -0.21
PFKM-229	ENST00000552818	PRAG1	Q86YV5	1406 aa		13.74	□□□□□ -0.21
PFKM-229	ENST00000552818	FER1L4	A9Z1Z3	1794 aa		13.74	□□□□□ -0.21
PFKM-229	ENST00000552818	SPATA31D1	Q6ZQQ2	1576 aa		13.74	□□□□□ -0.21
PFKM-229	ENST00000552818	ERVK-7	P63135	1459 aa		13.74	□□□□□ -0.21
PFKM-229	ENST00000552818	KIAA1210	Q9ULL0	1709 aa		13.73	□□□□□ -0.21
PFKM-229	ENST00000552818	TMEM131L	A2VDJ0	1609 aa		13.72	□□□□□ -0.21
PFKM-229	ENST00000552818	WASHC2C	Q9Y4E1	1318 aa		13.72	□□□□□ -0.21
PFKM-229	ENST00000552818	PRKCSH	P14314	528 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-229	ENST00000552818	C3	P01024	1663 aa		13.71	□□□□□ -0.21
PFKM-229	ENST00000552818	IQGAP1	P46940	1657 aa		13.7	□□□□□ -0.22
PFKM-229	ENST00000552818	NEXMIF	Q5QGS0	1516 aa		13.69	□□□□□ -0.22
PFKM-229	ENST00000552818	MYOM2	P54296	1465 aa		13.69	□□□□□ -0.22
PFKM-229	ENST00000552818	NRXN1	Q9ULB1	1477 aa		13.69	□□□□□ -0.22
PFKM-229	ENST00000552818	VSIG10	Q8N0Z9	540 aa		13.67	□□□□□ -0.22
PFKM-229	ENST00000552818	DCAF11	Q8TEB1	546 aa		13.66	□□□□□ -0.22
PFKM-229	ENST00000552818	GPRASP1	Q5JY77	1395 aa		13.66	□□□□□ -0.22
PFKM-229	ENST00000552818	ADAMTSL3	P82987	1691 aa		13.66	□□□□□ -0.22
PFKM-229	ENST00000552818	RGL3	Q3MIN7	710 aa		13.65	□□□□□ -0.22
PFKM-229	ENST00000552818	KDM5A	P29375	1690 aa	Known RBP	13.65	□□□□□ -0.22
PFKM-229	ENST00000552818	TAOK2	Q9UL54	1235 aa		13.64	□□□□□ -0.23
PFKM-229	ENST00000552818	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.63	□□□□□ -0.23
PFKM-229	ENST00000552818	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.63	□□□□□ -0.23
PFKM-229	ENST00000552818	SETD1A	O15047	1707 aa	Known RBP	13.63	□□□□□ -0.23
PFKM-229	ENST00000552818	UBR1	Q8IWV7	1749 aa		13.63	□□□□□ -0.23
PFKM-229	ENST00000552818	RIMS1	Q86UR5	1692 aa	Known RBP	13.63	□□□□□ -0.23
PFKM-229	ENST00000552818	HSPA5	P11021	654 aa	Known RBP	13.62	□□□□□ -0.23
PFKM-229	ENST00000552818	MLEC	Q14165	292 aa		13.62	□□□□□ -0.23
PFKM-229	ENST00000552818	KDM2A	Q9Y2K7	1162 aa		13.62	□□□□□ -0.23
PFKM-229	ENST00000552818	ZMYM3	Q14202	1370 aa		13.6	□□□□□ -0.23
PFKM-229	ENST00000552818	ZNF326	Q5BKZ1	582 aa	Known RBP	13.6	□□□□□ -0.23
PFKM-229	ENST00000552818	USP47	Q96K76	1375 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	ADGRB1	O14514	1584 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	PIK3C2G	O75747	1445 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	IDI1	Q13907	227 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	A2ML1	A8K2U0	1454 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	ASXL1	Q8IXJ9	1541 aa		13.59	□□□□□ -0.23
PFKM-229	ENST00000552818	SETBP1	Q9Y6X0	1596 aa		13.58	□□□□□ -0.23
PFKM-229	ENST00000552818	MYO3A	Q8NEV4	1616 aa		13.58	□□□□□ -0.24
PFKM-229	ENST00000552818	NRXN3	Q9Y4C0	1643 aa		13.58	□□□□□ -0.24
PFKM-229	ENST00000552818	NBPF1	Q3BBV0	1214 aa		13.58	□□□□□ -0.24
PFKM-229	ENST00000552818	DIEXF	Q68CQ4	756 aa	Known RBP	13.58	□□□□□ -0.24
PFKM-229	ENST00000552818	ADGRF5	Q8IZF2	1346 aa		13.58	□□□□□ -0.24
PFKM-229	ENST00000552818	C11orf95	C9JLR9	678 aa	Predicted RBP	13.57	□□□□□ -0.24
PFKM-229	ENST00000552818	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PFKM-229	ENST00000552818	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.56	□□□□□ -0.24
PFKM-229	ENST00000552818	ROCK2	O75116	1388 aa	Known RBP	13.56	□□□□□ -0.24
PFKM-229	ENST00000552818	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.56	□□□□□ -0.24
PFKM-229	ENST00000552818	ZFYVE9	O95405	1425 aa		13.56	□□□□□ -0.24
PFKM-229	ENST00000552818	SLC52A1	Q9NWF4	448 aa		13.55	□□□□□ -0.24
PFKM-229	ENST00000552818	WASHC2A	Q641Q2	1341 aa		13.55	□□□□□ -0.24
PFKM-229	ENST00000552818	ZNF142	P52746	1687 aa	Predicted RBP	13.53	□□□□□ -0.24
PFKM-229	ENST00000552818	STAC3	Q96MF2	364 aa		13.53	□□□□□ -0.24
PFKM-229	ENST00000552818	TNR	Q92752	1358 aa		13.53	□□□□□ -0.24
PFKM-229	ENST00000552818	CARD11	Q9BXL7	1154 aa		13.52	□□□□□ -0.25
PFKM-229	ENST00000552818	RPGRIP1L	Q68CZ1	1315 aa		13.52	□□□□□ -0.25
PFKM-229	ENST00000552818	CCDC7	Q96M83	1385 aa		13.52	□□□□□ -0.25
PFKM-229	ENST00000552818	MYOM1	P52179	1685 aa		13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	QRICH2	Q9H0J4	1663 aa		13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	PTPRM	P28827	1452 aa		13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	SCAF11	Q99590	1463 aa	Known RBP	13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	NLRP1	Q9C000	1473 aa		13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	ALK	Q9UM73	1620 aa		13.5	□□□□□ -0.25
PFKM-229	ENST00000552818	CHGA	P10645	457 aa	Known RBP	13.49	□□□□□ -0.25
PFKM-229	ENST00000552818	CEBPA	P49715	358 aa	Predicted RBP	13.49	□□□□□ -0.25
PFKM-229	ENST00000552818	KIF7	Q2M1P5	1343 aa		13.48	□□□□□ -0.25
PFKM-229	ENST00000552818	CFAP70	Q5T0N1	1121 aa		13.48	□□□□□ -0.25
PFKM-229	ENST00000552818	BBX	Q8WY36	941 aa	Predicted RBP	13.48	□□□□□ -0.25
PFKM-229	ENST00000552818	RIMS2	Q9UQ26	1411 aa		13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	SETD1B	Q9UPS6	1966 aa	Known RBP	13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	ST20-MTHFS	A0A0A6YYL1	179 aa		13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	TESK2	Q96S53	571 aa		13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	ARHGAP23	Q9P227	1491 aa		13.47	□□□□□ -0.25
PFKM-229	ENST00000552818	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.46	□□□□□ -0.25
PFKM-229	ENST00000552818	SLIT1	O75093	1534 aa		13.46	□□□□□ -0.25
PFKM-229	ENST00000552818	C14orf93	Q9H972	538 aa	Known RBP	13.46	□□□□□ -0.25
PFKM-229	ENST00000552818	DISP3	Q9P2K9	1392 aa		13.45	□□□□□ -0.26
PFKM-229	ENST00000552818	KNDC1	Q76NI1	1749 aa		13.45	□□□□□ -0.26
PFKM-229	ENST00000552818	DDX10	Q13206	875 aa	Known RBP	13.45	□□□□□ -0.26
PFKM-229	ENST00000552818	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.45	□□□□□ -0.26
PFKM-229	ENST00000552818	MIER1	Q8N108	512 aa		13.45	□□□□□ -0.26
PFKM-229	ENST00000552818	ESF1	Q9H501	851 aa	Known RBP	13.44	□□□□□ -0.26
PFKM-229	ENST00000552818	POLA2	Q14181	598 aa		13.43	□□□□□ -0.26
PFKM-229	ENST00000552818	TPRN	Q4KMQ1	711 aa		13.43	□□□□□ -0.26
PFKM-229	ENST00000552818	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.42	□□□□□ -0.26
PFKM-229	ENST00000552818	TMEM2	Q9UHN6	1383 aa		13.42	□□□□□ -0.26
PFKM-229	ENST00000552818	SPOCK2	Q92563	424 aa		13.41	□□□□□ -0.26
PFKM-229	ENST00000552818	VGF	O15240	615 aa	Predicted RBP	13.4	□□□□□ -0.26
PFKM-229	ENST00000552818	ECM2	O94769	699 aa	Predicted RBP	13.4	□□□□□ -0.26

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