RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
CACNB3-223ENST00000552480 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
CACNB3-223ENST00000552480 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
CACNB3-223ENST00000552480 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
CACNB3-223ENST00000552480 IQGAP1P46940 1657 aa17.78■□□□□ 0.44
CACNB3-223ENST00000552480 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
CACNB3-223ENST00000552480 MYO5BQ9ULV0 1848 aa17.77■□□□□ 0.43
CACNB3-223ENST00000552480 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
CACNB3-223ENST00000552480 PIK3C2GO75747 1445 aa17.76■□□□□ 0.43
CACNB3-223ENST00000552480 FER1L4A9Z1Z3 1794 aa17.76■□□□□ 0.43
CACNB3-223ENST00000552480 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
CACNB3-223ENST00000552480 MIER1Q8N108 512 aa17.75■□□□□ 0.43
CACNB3-223ENST00000552480 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
CACNB3-223ENST00000552480 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-223ENST00000552480 SCAF11Q99590 1463 aaKnown RBP17.74■□□□□ 0.43
CACNB3-223ENST00000552480 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
CACNB3-223ENST00000552480 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
CACNB3-223ENST00000552480 TNRQ92752 1358 aa17.72■□□□□ 0.43
CACNB3-223ENST00000552480 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.43
CACNB3-223ENST00000552480 A2ML1A8K2U0 1454 aa17.71■□□□□ 0.43
CACNB3-223ENST00000552480 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-223ENST00000552480 C3P01024 1663 aa17.71■□□□□ 0.42
CACNB3-223ENST00000552480 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
CACNB3-223ENST00000552480 EIF3AQ14152 1382 aaKnown RBP17.68■□□□□ 0.42
CACNB3-223ENST00000552480 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
CACNB3-223ENST00000552480 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
CACNB3-223ENST00000552480 ADGRB1O14514 1584 aa17.67■□□□□ 0.42
CACNB3-223ENST00000552480 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
CACNB3-223ENST00000552480 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
CACNB3-223ENST00000552480 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.42
CACNB3-223ENST00000552480 UBR1Q8IWV7 1749 aa17.64■□□□□ 0.41
CACNB3-223ENST00000552480 TESK2Q96S53 571 aa17.64■□□□□ 0.41
CACNB3-223ENST00000552480 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
CACNB3-223ENST00000552480 RIMS1Q86UR5 1692 aaKnown RBP17.62■□□□□ 0.41
CACNB3-223ENST00000552480 ANP32CO43423 234 aa17.61■□□□□ 0.41
CACNB3-223ENST00000552480 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-223ENST00000552480 TMF1P82094 1093 aa17.6■□□□□ 0.41
CACNB3-223ENST00000552480 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
CACNB3-223ENST00000552480 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
CACNB3-223ENST00000552480 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-223ENST00000552480 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.59■□□□□ 0.41
CACNB3-223ENST00000552480 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
CACNB3-223ENST00000552480 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.4
CACNB3-223ENST00000552480 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
CACNB3-223ENST00000552480 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
CACNB3-223ENST00000552480 ARHGEF28Q8N1W1 1705 aaKnown RBP17.57■□□□□ 0.4
CACNB3-223ENST00000552480 TMEM2Q9UHN6 1383 aa17.56■□□□□ 0.4
CACNB3-223ENST00000552480 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
CACNB3-223ENST00000552480 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
CACNB3-223ENST00000552480 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
CACNB3-223ENST00000552480 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CACNB3-223ENST00000552480 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-223ENST00000552480 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
CACNB3-223ENST00000552480 TMEM132EQ6IEE7 984 aa17.54■□□□□ 0.4
CACNB3-223ENST00000552480 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
CACNB3-223ENST00000552480 SLIT1O75093 1534 aa17.52■□□□□ 0.4
CACNB3-223ENST00000552480 PTPRMP28827 1452 aa17.52■□□□□ 0.4
CACNB3-223ENST00000552480 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
CACNB3-223ENST00000552480 ARHGAP23Q9P227 1491 aa17.51■□□□□ 0.39
CACNB3-223ENST00000552480 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
CACNB3-223ENST00000552480 CEP170BQ9Y4F5 1589 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-223ENST00000552480 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-223ENST00000552480 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
CACNB3-223ENST00000552480 MYOM1P52179 1685 aa17.48■□□□□ 0.39
CACNB3-223ENST00000552480 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
CACNB3-223ENST00000552480 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
CACNB3-223ENST00000552480 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
CACNB3-223ENST00000552480 THEMISQ8N1K5 641 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-223ENST00000552480 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-223ENST00000552480 KNDC1Q76NI1 1749 aa17.45■□□□□ 0.38
CACNB3-223ENST00000552480 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-223ENST00000552480 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
CACNB3-223ENST00000552480 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
CACNB3-223ENST00000552480 STK26Q9P289 416 aa17.43■□□□□ 0.38
CACNB3-223ENST00000552480 ADAMTS13Q76LX8 1427 aa17.43■□□□□ 0.38
CACNB3-223ENST00000552480 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
CACNB3-223ENST00000552480 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
CACNB3-223ENST00000552480 LTKP29376 864 aa17.42■□□□□ 0.38
CACNB3-223ENST00000552480 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
CACNB3-223ENST00000552480 METP08581 1390 aa17.41■□□□□ 0.38
CACNB3-223ENST00000552480 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
CACNB3-223ENST00000552480 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
CACNB3-223ENST00000552480 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
CACNB3-223ENST00000552480 MED14O60244 1454 aa17.41■□□□□ 0.38
CACNB3-223ENST00000552480 CPS1P31327 1500 aa17.41■□□□□ 0.38
CACNB3-223ENST00000552480 TECPR2O15040 1411 aa17.4■□□□□ 0.38
CACNB3-223ENST00000552480 PANK3Q9H999 370 aa17.4■□□□□ 0.38
CACNB3-223ENST00000552480 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
CACNB3-223ENST00000552480 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-223ENST00000552480 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
CACNB3-223ENST00000552480 BCANQ96GW7 911 aa17.38■□□□□ 0.37
CACNB3-223ENST00000552480 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
CACNB3-223ENST00000552480 POGKQ9P215 609 aa17.38■□□□□ 0.37
CACNB3-223ENST00000552480 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
CACNB3-223ENST00000552480 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
CACNB3-223ENST00000552480 RALBP1Q15311 655 aa17.36■□□□□ 0.37
CACNB3-223ENST00000552480 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
CACNB3-223ENST00000552480 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-223ENST00000552480 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
CACNB3-223ENST00000552480 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms