RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 MYO5BQ9ULV0 1848 aa27.37■■□□□ 1.97
MTA1-220ENST00000552286 TMEM131LA2VDJ0 1609 aa27.36■■□□□ 1.97
MTA1-220ENST00000552286 PPLO60437 1756 aa27.35■■□□□ 1.97
MTA1-220ENST00000552286 MYOM2P54296 1465 aa27.34■■□□□ 1.97
MTA1-220ENST00000552286 USP47Q96K76 1375 aa27.34■■□□□ 1.97
MTA1-220ENST00000552286 STAC3Q96MF2 364 aa27.33■■□□□ 1.97
MTA1-220ENST00000552286 RIMS1Q86UR5 1692 aaKnown RBP27.31■■□□□ 1.96
MTA1-220ENST00000552286 TNRQ92752 1358 aa27.31■■□□□ 1.96
MTA1-220ENST00000552286 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
MTA1-220ENST00000552286 CEBPAP49715 358 aaPredicted RBP27.29■■□□□ 1.96
MTA1-220ENST00000552286 ROCK2O75116 1388 aaKnown RBP27.29■■□□□ 1.96
MTA1-220ENST00000552286 KIF7Q2M1P5 1343 aa27.28■■□□□ 1.96
MTA1-220ENST00000552286 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
MTA1-220ENST00000552286 RPGRIP1LQ68CZ1 1315 aa27.28■■□□□ 1.96
MTA1-220ENST00000552286 PLPPR3Q6T4P5 718 aa27.26■■□□□ 1.95
MTA1-220ENST00000552286 CARD11Q9BXL7 1154 aa27.26■■□□□ 1.95
MTA1-220ENST00000552286 STAG3Q9UJ98 1225 aa27.26■■□□□ 1.95
MTA1-220ENST00000552286 ADGRF5Q8IZF2 1346 aa27.25■■□□□ 1.95
MTA1-220ENST00000552286 NRXN1Q9ULB1 1477 aa27.24■■□□□ 1.95
MTA1-220ENST00000552286 NBPF1Q3BBV0 1214 aa27.23■■□□□ 1.95
MTA1-220ENST00000552286 POLR1AO95602 1720 aaPredicted RBP27.22■■□□□ 1.95
MTA1-220ENST00000552286 KIAA1210Q9ULL0 1709 aa27.22■■□□□ 1.95
MTA1-220ENST00000552286 A2ML1A8K2U0 1454 aa27.22■■□□□ 1.95
MTA1-220ENST00000552286 LAMC1P11047 1609 aa27.22■■□□□ 1.95
MTA1-220ENST00000552286 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
MTA1-220ENST00000552286 NUTM2DQ5VT03 806 aaPredicted RBP27.19■■□□□ 1.94
MTA1-220ENST00000552286 KDM5AP29375 1690 aaKnown RBP27.18■■□□□ 1.94
MTA1-220ENST00000552286 NLRP1Q9C000 1473 aa27.18■■□□□ 1.94
MTA1-220ENST00000552286 PIK3C2GO75747 1445 aa27.18■■□□□ 1.94
MTA1-220ENST00000552286 UBR1Q8IWV7 1749 aa27.18■■□□□ 1.94
MTA1-220ENST00000552286 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
MTA1-220ENST00000552286 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
MTA1-220ENST00000552286 ZFYVE9O95405 1425 aa27.14■■□□□ 1.94
MTA1-220ENST00000552286 CFAP70Q5T0N1 1121 aa27.13■■□□□ 1.93
MTA1-220ENST00000552286 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
MTA1-220ENST00000552286 ST20-MTHFSA0A0A6YYL1 179 aa27.11■■□□□ 1.93
MTA1-220ENST00000552286 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
MTA1-220ENST00000552286 PRKRIP1Q9H875 184 aaPredicted RBP27.08■■□□□ 1.93
MTA1-220ENST00000552286 SETBP1Q9Y6X0 1596 aa27.07■■□□□ 1.92
MTA1-220ENST00000552286 C14orf93Q9H972 538 aaKnown RBP27.06■■□□□ 1.92
MTA1-220ENST00000552286 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
MTA1-220ENST00000552286 SENP3Q9H4L4 574 aaPredicted RBP27.04■■□□□ 1.92
MTA1-220ENST00000552286 PTPRMP28827 1452 aa27.04■■□□□ 1.92
MTA1-220ENST00000552286 TMEM2Q9UHN6 1383 aa27.04■■□□□ 1.92
MTA1-220ENST00000552286 POLR3GLQ9BT43 218 aa27.03■■□□□ 1.92
MTA1-220ENST00000552286 ADGRB1O14514 1584 aa27.03■■□□□ 1.92
MTA1-220ENST00000552286 CEP170BQ9Y4F5 1589 aaPredicted RBP27.03■■□□□ 1.92
MTA1-220ENST00000552286 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.01■■□□□ 1.91
MTA1-220ENST00000552286 ZNF142P52746 1687 aaPredicted RBP26.98■■□□□ 1.91
MTA1-220ENST00000552286 HDGFP51858 240 aaKnown RBP26.98■■□□□ 1.91
MTA1-220ENST00000552286 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
MTA1-220ENST00000552286 SETD1BQ9UPS6 1966 aaKnown RBP26.98■■□□□ 1.91
MTA1-220ENST00000552286 EIF3AQ14152 1382 aaKnown RBP26.97■■□□□ 1.91
MTA1-220ENST00000552286 TMEM132EQ6IEE7 984 aa26.97■■□□□ 1.91
MTA1-220ENST00000552286 SLIT1O75093 1534 aa26.96■■□□□ 1.91
MTA1-220ENST00000552286 ASXL1Q8IXJ9 1541 aa26.96■■□□□ 1.91
MTA1-220ENST00000552286 NRXN3Q9Y4C0 1643 aa26.95■■□□□ 1.9
MTA1-220ENST00000552286 THEMISQ8N1K5 641 aaPredicted RBP26.94■■□□□ 1.9
MTA1-220ENST00000552286 ARHGAP23Q9P227 1491 aa26.94■■□□□ 1.9
MTA1-220ENST00000552286 CCDC184Q52MB2 194 aa26.93■■□□□ 1.9
MTA1-220ENST00000552286 SETD1AO15047 1707 aaKnown RBP26.93■■□□□ 1.9
MTA1-220ENST00000552286 TESK2Q96S53 571 aa26.9■■□□□ 1.9
MTA1-220ENST00000552286 LTKP29376 864 aa26.9■■□□□ 1.9
MTA1-220ENST00000552286 TRAK1Q9UPV9 953 aa26.9■■□□□ 1.9
MTA1-220ENST00000552286 TXNDC2Q86VQ3 553 aa26.89■■□□□ 1.9
MTA1-220ENST00000552286 EID1Q9Y6B2 187 aa26.89■■□□□ 1.9
MTA1-220ENST00000552286 ARHGEF28Q8N1W1 1705 aaKnown RBP26.88■■□□□ 1.89
MTA1-220ENST00000552286 BCANQ96GW7 911 aa26.86■■□□□ 1.89
MTA1-220ENST00000552286 MRS2Q9HD23 443 aa26.86■■□□□ 1.89
MTA1-220ENST00000552286 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
MTA1-220ENST00000552286 YTHDC2Q9H6S0 1430 aaKnown RBP26.85■■□□□ 1.89
MTA1-220ENST00000552286 DISP3Q9P2K9 1392 aa26.85■■□□□ 1.89
MTA1-220ENST00000552286 QRICH2Q9H0J4 1663 aa26.84■■□□□ 1.89
MTA1-220ENST00000552286 CENPJQ9HC77 1338 aaPredicted RBP26.83■■□□□ 1.88
MTA1-220ENST00000552286 TMF1P82094 1093 aa26.82■■□□□ 1.88
MTA1-220ENST00000552286 STK26Q9P289 416 aa26.82■■□□□ 1.88
MTA1-220ENST00000552286 HNRNPUQ00839 825 aaKnown RBP eCLIP26.82■■□□□ 1.88
MTA1-220ENST00000552286 KDM4FA0A1W2PPD8 638 aa26.81■■□□□ 1.88
MTA1-220ENST00000552286 ADAMTS13Q76LX8 1427 aa26.8■■□□□ 1.88
MTA1-220ENST00000552286 METP08581 1390 aa26.78■■□□□ 1.88
MTA1-220ENST00000552286 SBNO2Q9Y2G9 1366 aa26.77■■□□□ 1.88
MTA1-220ENST00000552286 CNGB1Q14028 1251 aaPredicted RBP26.76■■□□□ 1.87
MTA1-220ENST00000552286 FAM9BQ8IZU0 186 aa26.76■■□□□ 1.87
MTA1-220ENST00000552286 LRPPRCP42704 1394 aaKnown RBP26.75■■□□□ 1.87
MTA1-220ENST00000552286 MED14O60244 1454 aa26.74■■□□□ 1.87
MTA1-220ENST00000552286 KTN1Q86UP2 1357 aaKnown RBP26.74■■□□□ 1.87
MTA1-220ENST00000552286 ANKLE2Q86XL3 938 aa26.73■■□□□ 1.87
MTA1-220ENST00000552286 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
MTA1-220ENST00000552286 SLC24A1O60721 1099 aa26.73■■□□□ 1.87
MTA1-220ENST00000552286 KNDC1Q76NI1 1749 aa26.72■■□□□ 1.87
MTA1-220ENST00000552286 DLC1Q96QB1 1528 aa26.72■■□□□ 1.87
MTA1-220ENST00000552286 DIP2AQ14689 1571 aa26.72■■□□□ 1.87
MTA1-220ENST00000552286 SUPT16HQ9Y5B9 1047 aaKnown RBP26.71■■□□□ 1.87
MTA1-220ENST00000552286 SAFB2Q14151 953 aaKnown RBP eCLIP26.71■■□□□ 1.87
MTA1-220ENST00000552286 ABCC11Q96J66 1382 aa26.7■■□□□ 1.87
MTA1-220ENST00000552286 PER1O15534 1290 aaPredicted RBP26.7■■□□□ 1.86
MTA1-220ENST00000552286 RALBP1Q15311 655 aa26.7■■□□□ 1.86
MTA1-220ENST00000552286 CDCA8Q53HL2 280 aa26.7■■□□□ 1.86
MTA1-220ENST00000552286 PRAM1Q96QH2 718 aa26.7■■□□□ 1.86
MTA1-220ENST00000552286 POGKQ9P215 609 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms