RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 BCANQ96GW7 911 aa20.28■□□□□ 0.84
CACNB3-221ENST00000552022 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
CACNB3-221ENST00000552022 ADGRB3O60242 1522 aa20.27■□□□□ 0.83
CACNB3-221ENST00000552022 KANK1Q14678 1352 aa20.25■□□□□ 0.83
CACNB3-221ENST00000552022 LMTK2Q8IWU2 1503 aa20.25■□□□□ 0.83
CACNB3-221ENST00000552022 NOS1P29475 1434 aa20.25■□□□□ 0.83
CACNB3-221ENST00000552022 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
CACNB3-221ENST00000552022 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-221ENST00000552022 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
CACNB3-221ENST00000552022 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-221ENST00000552022 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-221ENST00000552022 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
CACNB3-221ENST00000552022 ABCC5O15440 1437 aa20.22■□□□□ 0.83
CACNB3-221ENST00000552022 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
CACNB3-221ENST00000552022 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
CACNB3-221ENST00000552022 ZFYVE9O95405 1425 aa20.2■□□□□ 0.82
CACNB3-221ENST00000552022 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
CACNB3-221ENST00000552022 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-221ENST00000552022 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-221ENST00000552022 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-221ENST00000552022 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
CACNB3-221ENST00000552022 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
CACNB3-221ENST00000552022 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
CACNB3-221ENST00000552022 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
CACNB3-221ENST00000552022 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
CACNB3-221ENST00000552022 AFF2P51816 1311 aa20.17■□□□□ 0.82
CACNB3-221ENST00000552022 ATF3P18847 181 aa20.15■□□□□ 0.82
CACNB3-221ENST00000552022 RIMS2Q9UQ26 1411 aa20.15■□□□□ 0.82
CACNB3-221ENST00000552022 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
CACNB3-221ENST00000552022 BRINP3Q76B58 766 aa20.14■□□□□ 0.81
CACNB3-221ENST00000552022 RGS12O14924 1447 aa20.13■□□□□ 0.81
CACNB3-221ENST00000552022 DAPK1P53355 1430 aa20.13■□□□□ 0.81
CACNB3-221ENST00000552022 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-221ENST00000552022 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
CACNB3-221ENST00000552022 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
CACNB3-221ENST00000552022 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
CACNB3-221ENST00000552022 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
CACNB3-221ENST00000552022 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
CACNB3-221ENST00000552022 QTRT2Q9H974 415 aaKnown RBP20.1■□□□□ 0.81
CACNB3-221ENST00000552022 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
CACNB3-221ENST00000552022 RBM6P78332 1123 aaKnown RBP20.09■□□□□ 0.81
CACNB3-221ENST00000552022 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.81
CACNB3-221ENST00000552022 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
CACNB3-221ENST00000552022 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
CACNB3-221ENST00000552022 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
CACNB3-221ENST00000552022 NHSL1Q5SYE7 1610 aa20.06■□□□□ 0.8
CACNB3-221ENST00000552022 C8orf37Q96NL8 207 aa20.06■□□□□ 0.8
CACNB3-221ENST00000552022 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
CACNB3-221ENST00000552022 PIK3R4Q99570 1358 aa20.06■□□□□ 0.8
CACNB3-221ENST00000552022 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
CACNB3-221ENST00000552022 PTPRUQ92729 1446 aa20.04■□□□□ 0.8
CACNB3-221ENST00000552022 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
CACNB3-221ENST00000552022 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
CACNB3-221ENST00000552022 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
CACNB3-221ENST00000552022 DCCP43146 1447 aa20.01■□□□□ 0.79
CACNB3-221ENST00000552022 MST1RQ04912 1400 aa20.01■□□□□ 0.79
CACNB3-221ENST00000552022 TRPM2O94759 1503 aa20■□□□□ 0.79
CACNB3-221ENST00000552022 PNPLA6Q8IY17 1366 aa19.99■□□□□ 0.79
CACNB3-221ENST00000552022 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
CACNB3-221ENST00000552022 ATAD2Q6PL18 1390 aa19.98■□□□□ 0.79
CACNB3-221ENST00000552022 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
CACNB3-221ENST00000552022 ZRANB1Q9UGI0 708 aa19.98■□□□□ 0.79
CACNB3-221ENST00000552022 SETBP1Q9Y6X0 1596 aa19.98■□□□□ 0.79
CACNB3-221ENST00000552022 EP400Q96L91 3159 aa19.98■□□□□ 0.79
CACNB3-221ENST00000552022 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
CACNB3-221ENST00000552022 UNC13BO14795 1591 aa19.95■□□□□ 0.78
CACNB3-221ENST00000552022 ADGRL2O95490 1459 aa19.95■□□□□ 0.78
CACNB3-221ENST00000552022 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
CACNB3-221ENST00000552022 E9PCH4 1651 aa19.94■□□□□ 0.78
CACNB3-221ENST00000552022 ANKRD50Q9ULJ7 1429 aa19.93■□□□□ 0.78
CACNB3-221ENST00000552022 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
CACNB3-221ENST00000552022 FOXD1Q16676 465 aa19.92■□□□□ 0.78
CACNB3-221ENST00000552022 USP21Q9UK80 565 aa19.91■□□□□ 0.78
CACNB3-221ENST00000552022 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
CACNB3-221ENST00000552022 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
CACNB3-221ENST00000552022 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
CACNB3-221ENST00000552022 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-221ENST00000552022 LAMC1P11047 1609 aa19.87■□□□□ 0.77
CACNB3-221ENST00000552022 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
CACNB3-221ENST00000552022 METP08581 1390 aa19.86■□□□□ 0.77
CACNB3-221ENST00000552022 CCDC125Q86Z20 511 aa19.86■□□□□ 0.77
CACNB3-221ENST00000552022 ATRNO75882 1429 aa19.85■□□□□ 0.77
CACNB3-221ENST00000552022 SOS2Q07890 1332 aaPredicted RBP19.83■□□□□ 0.77
CACNB3-221ENST00000552022 C1orf167Q5SNV9 1468 aa19.83■□□□□ 0.76
CACNB3-221ENST00000552022 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
CACNB3-221ENST00000552022 APLP2Q06481 763 aa19.81■□□□□ 0.76
CACNB3-221ENST00000552022 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
CACNB3-221ENST00000552022 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
CACNB3-221ENST00000552022 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
CACNB3-221ENST00000552022 COL22A1Q8NFW1 1626 aaPredicted RBP19.79■□□□□ 0.76
CACNB3-221ENST00000552022 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
CACNB3-221ENST00000552022 MARF1Q9Y4F3 1742 aaKnown RBP19.77■□□□□ 0.76
CACNB3-221ENST00000552022 GJD4Q96KN9 370 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-221ENST00000552022 MYOM2P54296 1465 aa19.73■□□□□ 0.75
CACNB3-221ENST00000552022 ZNF326Q5BKZ1 582 aaKnown RBP19.73■□□□□ 0.75
CACNB3-221ENST00000552022 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
CACNB3-221ENST00000552022 NUP155O75694 1391 aa19.71■□□□□ 0.75
CACNB3-221ENST00000552022 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
CACNB3-221ENST00000552022 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
CACNB3-221ENST00000552022 DEFB132Q7Z7B7 95 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms