RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
PTCH1-225ENST00000551845 SYNMO15061 1565 aa15.69■□□□□ 0.1
PTCH1-225ENST00000551845 IQGAP3Q86VI3 1631 aa15.66■□□□□ 0.1
PTCH1-225ENST00000551845 TET3O43151 1660 aa15.66■□□□□ 0.1
PTCH1-225ENST00000551845 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
PTCH1-225ENST00000551845 LTKP29376 864 aa15.64■□□□□ 0.09
PTCH1-225ENST00000551845 CFAP65Q6ZU64 1925 aaKnown RBP15.63■□□□□ 0.09
PTCH1-225ENST00000551845 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.63■□□□□ 0.09
PTCH1-225ENST00000551845 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
PTCH1-225ENST00000551845 ZNF326Q5BKZ1 582 aaKnown RBP15.62■□□□□ 0.09
PTCH1-225ENST00000551845 POTEAQ6S8J7 498 aa15.62■□□□□ 0.09
PTCH1-225ENST00000551845 BCANQ96GW7 911 aa15.62■□□□□ 0.09
PTCH1-225ENST00000551845 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-225ENST00000551845 SCAF11Q99590 1463 aaKnown RBP15.59■□□□□ 0.09
PTCH1-225ENST00000551845 E9PCH4 1651 aa15.58■□□□□ 0.08
PTCH1-225ENST00000551845 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
PTCH1-225ENST00000551845 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
PTCH1-225ENST00000551845 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-225ENST00000551845 MSH5O43196 834 aa15.56■□□□□ 0.08
PTCH1-225ENST00000551845 NUTM2DQ5VT03 806 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-225ENST00000551845 ARHGAP23Q9P227 1491 aa15.55■□□□□ 0.08
PTCH1-225ENST00000551845 FAM135BQ49AJ0 1406 aa15.55■□□□□ 0.08
PTCH1-225ENST00000551845 SLIT1O75093 1534 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 CCDC144AA2RUR9 1427 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 RPGRIP1LQ68CZ1 1315 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
PTCH1-225ENST00000551845 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
PTCH1-225ENST00000551845 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-225ENST00000551845 SLC26A8Q96RN1 970 aa15.53■□□□□ 0.08
PTCH1-225ENST00000551845 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
PTCH1-225ENST00000551845 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
PTCH1-225ENST00000551845 ADGRB3O60242 1522 aa15.51■□□□□ 0.07
PTCH1-225ENST00000551845 TMEM94Q12767 1356 aa15.5■□□□□ 0.07
PTCH1-225ENST00000551845 TRPM2O94759 1503 aa15.5■□□□□ 0.07
PTCH1-225ENST00000551845 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
PTCH1-225ENST00000551845 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
PTCH1-225ENST00000551845 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-225ENST00000551845 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
PTCH1-225ENST00000551845 PLEKHG1Q9ULL1 1385 aa15.49■□□□□ 0.07
PTCH1-225ENST00000551845 TMEM131LA2VDJ0 1609 aa15.48■□□□□ 0.07
PTCH1-225ENST00000551845 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
PTCH1-225ENST00000551845 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
PTCH1-225ENST00000551845 KCNA6P17658 529 aa15.47■□□□□ 0.07
PTCH1-225ENST00000551845 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.06
PTCH1-225ENST00000551845 PHLPP1O60346 1717 aa15.45■□□□□ 0.06
PTCH1-225ENST00000551845 JCADQ9P266 1359 aa15.44■□□□□ 0.06
PTCH1-225ENST00000551845 CLTCL1P53675 1640 aa15.43■□□□□ 0.06
PTCH1-225ENST00000551845 MSH6P52701 1360 aa15.42■□□□□ 0.06
PTCH1-225ENST00000551845 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
PTCH1-225ENST00000551845 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTCH1-225ENST00000551845 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
PTCH1-225ENST00000551845 SPATA31E1Q6ZUB1 1445 aa15.42■□□□□ 0.06
PTCH1-225ENST00000551845 DCAF11Q8TEB1 546 aa15.41■□□□□ 0.06
PTCH1-225ENST00000551845 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
PTCH1-225ENST00000551845 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
PTCH1-225ENST00000551845 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
PTCH1-225ENST00000551845 ADGRF5Q8IZF2 1346 aa15.4■□□□□ 0.06
PTCH1-225ENST00000551845 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
PTCH1-225ENST00000551845 DHX57Q6P158 1386 aaKnown RBP15.38■□□□□ 0.05
PTCH1-225ENST00000551845 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
PTCH1-225ENST00000551845 ZNF772Q68DY9 489 aaPredicted RBP15.38■□□□□ 0.05
PTCH1-225ENST00000551845 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
PTCH1-225ENST00000551845 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
PTCH1-225ENST00000551845 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
PTCH1-225ENST00000551845 NEXMIFQ5QGS0 1516 aa15.35■□□□□ 0.05
PTCH1-225ENST00000551845 KIF1BO60333 1816 aa15.35■□□□□ 0.05
PTCH1-225ENST00000551845 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
PTCH1-225ENST00000551845 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
PTCH1-225ENST00000551845 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
PTCH1-225ENST00000551845 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
PTCH1-225ENST00000551845 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-225ENST00000551845 LRP6O75581 1613 aa15.33■□□□□ 0.04
PTCH1-225ENST00000551845 RXRBP28702 533 aa15.33■□□□□ 0.04
PTCH1-225ENST00000551845 METP08581 1390 aa15.33■□□□□ 0.04
PTCH1-225ENST00000551845 MYO5BQ9ULV0 1848 aa15.32■□□□□ 0.04
PTCH1-225ENST00000551845 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
PTCH1-225ENST00000551845 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PTCH1-225ENST00000551845 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
PTCH1-225ENST00000551845 NUTM2BA6NNL0 878 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-225ENST00000551845 NUTM2EB1AL46 878 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-225ENST00000551845 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-225ENST00000551845 STK26Q9P289 416 aa15.29■□□□□ 0.04
PTCH1-225ENST00000551845 CHD2O14647 1828 aaKnown RBP15.29■□□□□ 0.04
PTCH1-225ENST00000551845 SETBP1Q9Y6X0 1596 aa15.28■□□□□ 0.04
PTCH1-225ENST00000551845 PTPRUQ92729 1446 aa15.28■□□□□ 0.04
PTCH1-225ENST00000551845 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
PTCH1-225ENST00000551845 SHPRHQ149N8 1683 aa15.27■□□□□ 0.03
PTCH1-225ENST00000551845 DIP2AQ14689 1571 aa15.27■□□□□ 0.03
PTCH1-225ENST00000551845 NCOA3Q9Y6Q9 1424 aa15.26■□□□□ 0.03
PTCH1-225ENST00000551845 ATF3P18847 181 aa15.26■□□□□ 0.03
PTCH1-225ENST00000551845 CADPS2Q86UW7 1296 aa15.26■□□□□ 0.03
PTCH1-225ENST00000551845 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
PTCH1-225ENST00000551845 SIRT1Q96EB6 747 aa15.25■□□□□ 0.03
PTCH1-225ENST00000551845 MYOM2P54296 1465 aa15.25■□□□□ 0.03
PTCH1-225ENST00000551845 AHDC1Q5TGY3 1603 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-225ENST00000551845 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
PTCH1-225ENST00000551845 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
PTCH1-225ENST00000551845 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms