RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 MADDQ8WXG6 1647 aa10.88□□□□□ -0.67
USP44-206ENST00000551837 ZNF326Q5BKZ1 582 aaKnown RBP10.88□□□□□ -0.67
USP44-206ENST00000551837 C3P01024 1663 aa10.88□□□□□ -0.67
USP44-206ENST00000551837 FER1L4A9Z1Z3 1794 aa10.88□□□□□ -0.67
USP44-206ENST00000551837 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
USP44-206ENST00000551837 NBPF8Q3BBV2 869 aa10.87□□□□□ -0.67
USP44-206ENST00000551837 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
USP44-206ENST00000551837 KDM5AP29375 1690 aaKnown RBP10.86□□□□□ -0.67
USP44-206ENST00000551837 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
USP44-206ENST00000551837 TMEM2Q9UHN6 1383 aa10.86□□□□□ -0.67
USP44-206ENST00000551837 ADGRB3O60242 1522 aa10.85□□□□□ -0.67
USP44-206ENST00000551837 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
USP44-206ENST00000551837 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
USP44-206ENST00000551837 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
USP44-206ENST00000551837 UGGT1Q9NYU2 1555 aa10.85□□□□□ -0.67
USP44-206ENST00000551837 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
USP44-206ENST00000551837 MYOM2P54296 1465 aa10.84□□□□□ -0.67
USP44-206ENST00000551837 RIMS1Q86UR5 1692 aaKnown RBP10.83□□□□□ -0.68
USP44-206ENST00000551837 NRXN1Q9ULB1 1477 aa10.83□□□□□ -0.68
USP44-206ENST00000551837 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
USP44-206ENST00000551837 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
USP44-206ENST00000551837 PRAG1Q86YV5 1406 aa10.83□□□□□ -0.68
USP44-206ENST00000551837 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
USP44-206ENST00000551837 KIF1BO60333 1816 aa10.82□□□□□ -0.68
USP44-206ENST00000551837 POTEHQ6S545 545 aa10.82□□□□□ -0.68
USP44-206ENST00000551837 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
USP44-206ENST00000551837 SLIT1O75093 1534 aa10.82□□□□□ -0.68
USP44-206ENST00000551837 LTKP29376 864 aa10.81□□□□□ -0.68
USP44-206ENST00000551837 TBX22Q9Y458 520 aa10.81□□□□□ -0.68
USP44-206ENST00000551837 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
USP44-206ENST00000551837 GPRASP1Q5JY77 1395 aa10.8□□□□□ -0.68
USP44-206ENST00000551837 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
USP44-206ENST00000551837 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
USP44-206ENST00000551837 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
USP44-206ENST00000551837 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
USP44-206ENST00000551837 NEXMIFQ5QGS0 1516 aa10.79□□□□□ -0.68
USP44-206ENST00000551837 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
USP44-206ENST00000551837 PLEKHG1Q9ULL1 1385 aa10.78□□□□□ -0.68
USP44-206ENST00000551837 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
USP44-206ENST00000551837 NBPF1Q3BBV0 1214 aa10.78□□□□□ -0.68
USP44-206ENST00000551837 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
USP44-206ENST00000551837 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP44-206ENST00000551837 UBR1Q8IWV7 1749 aa10.77□□□□□ -0.69
USP44-206ENST00000551837 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.69
USP44-206ENST00000551837 NUTM2DQ5VT03 806 aaPredicted RBP10.76□□□□□ -0.69
USP44-206ENST00000551837 MED14O60244 1454 aa10.75□□□□□ -0.69
USP44-206ENST00000551837 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
USP44-206ENST00000551837 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
USP44-206ENST00000551837 MYO3AQ8NEV4 1616 aa10.75□□□□□ -0.69
USP44-206ENST00000551837 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
USP44-206ENST00000551837 PIK3R4Q99570 1358 aa10.75□□□□□ -0.69
USP44-206ENST00000551837 IFT172Q9UG01 1749 aa10.74□□□□□ -0.69
USP44-206ENST00000551837 PPLO60437 1756 aa10.74□□□□□ -0.69
USP44-206ENST00000551837 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
USP44-206ENST00000551837 SCAF11Q99590 1463 aaKnown RBP10.74□□□□□ -0.69
USP44-206ENST00000551837 ZNF142P52746 1687 aaPredicted RBP10.73□□□□□ -0.69
USP44-206ENST00000551837 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
USP44-206ENST00000551837 KIAA1210Q9ULL0 1709 aa10.72□□□□□ -0.69
USP44-206ENST00000551837 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
USP44-206ENST00000551837 ADAMTS13Q76LX8 1427 aa10.72□□□□□ -0.69
USP44-206ENST00000551837 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
USP44-206ENST00000551837 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
USP44-206ENST00000551837 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
USP44-206ENST00000551837 LMTK3Q96Q04 1460 aa10.71□□□□□ -0.69
USP44-206ENST00000551837 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.69
USP44-206ENST00000551837 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
USP44-206ENST00000551837 TRPM1Q7Z4N2 1603 aa10.7□□□□□ -0.7
USP44-206ENST00000551837 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
USP44-206ENST00000551837 BCANQ96GW7 911 aa10.7□□□□□ -0.7
USP44-206ENST00000551837 SLC26A8Q96RN1 970 aa10.7□□□□□ -0.7
USP44-206ENST00000551837 LAMC1P11047 1609 aa10.69□□□□□ -0.7
USP44-206ENST00000551837 ADGRB1O14514 1584 aa10.69□□□□□ -0.7
USP44-206ENST00000551837 NPHP4O75161 1426 aaPredicted RBP10.69□□□□□ -0.7
USP44-206ENST00000551837 METP08581 1390 aa10.69□□□□□ -0.7
USP44-206ENST00000551837 ST20-MTHFSA0A0A6YYL1 179 aa10.69□□□□□ -0.7
USP44-206ENST00000551837 KCNA6P17658 529 aa10.69□□□□□ -0.7
USP44-206ENST00000551837 HSPA2P54652 639 aa10.68□□□□□ -0.7
USP44-206ENST00000551837 TESK2Q96S53 571 aa10.68□□□□□ -0.7
USP44-206ENST00000551837 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
USP44-206ENST00000551837 AMOTL2Q9Y2J4 779 aa10.68□□□□□ -0.7
USP44-206ENST00000551837 MYO5BQ9ULV0 1848 aa10.68□□□□□ -0.7
USP44-206ENST00000551837 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
USP44-206ENST00000551837 EIF3AQ14152 1382 aaKnown RBP10.67□□□□□ -0.7
USP44-206ENST00000551837 USP47Q96K76 1375 aa10.67□□□□□ -0.7
USP44-206ENST00000551837 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
USP44-206ENST00000551837 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
USP44-206ENST00000551837 DIP2AQ14689 1571 aa10.66□□□□□ -0.7
USP44-206ENST00000551837 TECPR2O15040 1411 aa10.66□□□□□ -0.7
USP44-206ENST00000551837 TMF1P82094 1093 aa10.65□□□□□ -0.7
USP44-206ENST00000551837 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
USP44-206ENST00000551837 NRXN3Q9Y4C0 1643 aa10.65□□□□□ -0.7
USP44-206ENST00000551837 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
USP44-206ENST00000551837 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
USP44-206ENST00000551837 STK26Q9P289 416 aa10.64□□□□□ -0.71
USP44-206ENST00000551837 POGKQ9P215 609 aa10.63□□□□□ -0.71
USP44-206ENST00000551837 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
USP44-206ENST00000551837 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
USP44-206ENST00000551837 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
USP44-206ENST00000551837 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
USP44-206ENST00000551837 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms