RNA–Protein interactions for RNA: ENST00000551661.5

CNOT2-232, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 4

Gene CNOT2, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-232ENST00000551661 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
CNOT2-232ENST00000551661 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
CNOT2-232ENST00000551661 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
CNOT2-232ENST00000551661 MYO5BQ9ULV0 1848 aa12.88□□□□□ -0.35
CNOT2-232ENST00000551661 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
CNOT2-232ENST00000551661 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
CNOT2-232ENST00000551661 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
CNOT2-232ENST00000551661 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
CNOT2-232ENST00000551661 ST20-MTHFSA0A0A6YYL1 179 aa12.85□□□□□ -0.35
CNOT2-232ENST00000551661 NBPF1Q3BBV0 1214 aa12.85□□□□□ -0.35
CNOT2-232ENST00000551661 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
CNOT2-232ENST00000551661 GGT6Q6P531 493 aa12.84□□□□□ -0.35
CNOT2-232ENST00000551661 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
CNOT2-232ENST00000551661 WASHC2CQ9Y4E1 1318 aa12.84□□□□□ -0.35
CNOT2-232ENST00000551661 MYOM1P52179 1685 aa12.83□□□□□ -0.35
CNOT2-232ENST00000551661 TMEM131LA2VDJ0 1609 aa12.83□□□□□ -0.36
CNOT2-232ENST00000551661 KDM5AP29375 1690 aaKnown RBP12.82□□□□□ -0.36
CNOT2-232ENST00000551661 PIK3C2GO75747 1445 aa12.81□□□□□ -0.36
CNOT2-232ENST00000551661 ERVK-7P63135 1459 aa12.81□□□□□ -0.36
CNOT2-232ENST00000551661 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
CNOT2-232ENST00000551661 TESK2Q96S53 571 aa12.8□□□□□ -0.36
CNOT2-232ENST00000551661 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
CNOT2-232ENST00000551661 ADGRB1O14514 1584 aa12.8□□□□□ -0.36
CNOT2-232ENST00000551661 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
CNOT2-232ENST00000551661 QRICH2Q9H0J4 1663 aa12.79□□□□□ -0.36
CNOT2-232ENST00000551661 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
CNOT2-232ENST00000551661 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
CNOT2-232ENST00000551661 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
CNOT2-232ENST00000551661 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
CNOT2-232ENST00000551661 KTN1Q86UP2 1357 aaKnown RBP12.76□□□□□ -0.37
CNOT2-232ENST00000551661 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
CNOT2-232ENST00000551661 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
CNOT2-232ENST00000551661 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
CNOT2-232ENST00000551661 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-232ENST00000551661 TMF1P82094 1093 aa12.73□□□□□ -0.37
CNOT2-232ENST00000551661 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
CNOT2-232ENST00000551661 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
CNOT2-232ENST00000551661 SETD1AO15047 1707 aaKnown RBP12.72□□□□□ -0.37
CNOT2-232ENST00000551661 SLC52A1Q9NWF4 448 aa12.72□□□□□ -0.37
CNOT2-232ENST00000551661 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.37
CNOT2-232ENST00000551661 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
CNOT2-232ENST00000551661 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
CNOT2-232ENST00000551661 CCDC184Q52MB2 194 aa12.69□□□□□ -0.38
CNOT2-232ENST00000551661 C14orf93Q9H972 538 aaKnown RBP12.69□□□□□ -0.38
CNOT2-232ENST00000551661 IDI1Q13907 227 aa12.68□□□□□ -0.38
CNOT2-232ENST00000551661 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
CNOT2-232ENST00000551661 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
CNOT2-232ENST00000551661 FER1L4A9Z1Z3 1794 aa12.67□□□□□ -0.38
CNOT2-232ENST00000551661 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
CNOT2-232ENST00000551661 RALBP1Q15311 655 aa12.67□□□□□ -0.38
CNOT2-232ENST00000551661 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
CNOT2-232ENST00000551661 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
CNOT2-232ENST00000551661 A2ML1A8K2U0 1454 aa12.66□□□□□ -0.38
CNOT2-232ENST00000551661 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
CNOT2-232ENST00000551661 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
CNOT2-232ENST00000551661 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
CNOT2-232ENST00000551661 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
CNOT2-232ENST00000551661 NRXN3Q9Y4C0 1643 aa12.66□□□□□ -0.38
CNOT2-232ENST00000551661 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
CNOT2-232ENST00000551661 C3P01024 1663 aa12.64□□□□□ -0.39
CNOT2-232ENST00000551661 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
CNOT2-232ENST00000551661 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
CNOT2-232ENST00000551661 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
CNOT2-232ENST00000551661 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
CNOT2-232ENST00000551661 PTPRMP28827 1452 aa12.62□□□□□ -0.39
CNOT2-232ENST00000551661 LRPPRCP42704 1394 aaKnown RBP12.62□□□□□ -0.39
CNOT2-232ENST00000551661 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
CNOT2-232ENST00000551661 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
CNOT2-232ENST00000551661 PANK3Q9H999 370 aa12.62□□□□□ -0.39
CNOT2-232ENST00000551661 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
CNOT2-232ENST00000551661 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
CNOT2-232ENST00000551661 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
CNOT2-232ENST00000551661 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
CNOT2-232ENST00000551661 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
CNOT2-232ENST00000551661 TNRQ92752 1358 aa12.58□□□□□ -0.4
CNOT2-232ENST00000551661 MLECQ14165 292 aa12.58□□□□□ -0.4
CNOT2-232ENST00000551661 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
CNOT2-232ENST00000551661 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
CNOT2-232ENST00000551661 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
CNOT2-232ENST00000551661 INSRP06213 1382 aa12.57□□□□□ -0.4
CNOT2-232ENST00000551661 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
CNOT2-232ENST00000551661 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
CNOT2-232ENST00000551661 TRAK1Q9UPV9 953 aa12.57□□□□□ -0.4
CNOT2-232ENST00000551661 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
CNOT2-232ENST00000551661 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
CNOT2-232ENST00000551661 NUTM2DQ5VT03 806 aaPredicted RBP12.56□□□□□ -0.4
CNOT2-232ENST00000551661 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
CNOT2-232ENST00000551661 PUS7Q96PZ0 661 aaKnown RBP12.56□□□□□ -0.4
CNOT2-232ENST00000551661 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
CNOT2-232ENST00000551661 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
CNOT2-232ENST00000551661 CPS1P31327 1500 aa12.55□□□□□ -0.4
CNOT2-232ENST00000551661 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
CNOT2-232ENST00000551661 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
CNOT2-232ENST00000551661 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
CNOT2-232ENST00000551661 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CNOT2-232ENST00000551661 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
CNOT2-232ENST00000551661 KIF20BQ96Q89 1820 aa12.52□□□□□ -0.41
CNOT2-232ENST00000551661 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
CNOT2-232ENST00000551661 NINLQ9Y2I6 1382 aa12.52□□□□□ -0.41
CNOT2-232ENST00000551661 SLIT1O75093 1534 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 500 ms