RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
SCAF11-215ENST00000551391 EYA1Q99502 592 aa8.16□□□□□ -1.1
SCAF11-215ENST00000551391 MLLT3P42568 568 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-215ENST00000551391 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
SCAF11-215ENST00000551391 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-215ENST00000551391 ZPR1O75312 459 aa8.14□□□□□ -1.11
SCAF11-215ENST00000551391 SMYD5Q6GMV2 418 aa8.14□□□□□ -1.11
SCAF11-215ENST00000551391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCAF11-215ENST00000551391 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
SCAF11-215ENST00000551391 TMUB1Q9BVT8 246 aa8.14□□□□□ -1.11
SCAF11-215ENST00000551391 DNAJB2P25686 324 aa8.13□□□□□ -1.11
SCAF11-215ENST00000551391 NUTM2FA1L443 756 aa8.12□□□□□ -1.11
SCAF11-215ENST00000551391 PDZRN3Q9UPQ7 1066 aa8.12□□□□□ -1.11
SCAF11-215ENST00000551391 PTGDRQ13258 359 aa8.11□□□□□ -1.11
SCAF11-215ENST00000551391 KMT5BQ4FZB7 885 aa8.1□□□□□ -1.11
SCAF11-215ENST00000551391 LMOD2Q6P5Q4 547 aa8.09□□□□□ -1.11
SCAF11-215ENST00000551391 BLOC1S3Q6QNY0 202 aa8.09□□□□□ -1.11
SCAF11-215ENST00000551391 ADGRG1Q9Y653 693 aa8.08□□□□□ -1.12
SCAF11-215ENST00000551391 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
SCAF11-215ENST00000551391 TMEM134Q9H6X4 195 aa8.07□□□□□ -1.12
SCAF11-215ENST00000551391 RCCD1A6NED2 376 aa8.06□□□□□ -1.12
SCAF11-215ENST00000551391 LCE2BO14633 110 aa8.06□□□□□ -1.12
SCAF11-215ENST00000551391 FCHSD2O94868 740 aa8.06□□□□□ -1.12
SCAF11-215ENST00000551391 SLC19A1P41440 591 aa8.06□□□□□ -1.12
SCAF11-215ENST00000551391 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
SCAF11-215ENST00000551391 CFHP08603 1231 aa8.05□□□□□ -1.12
SCAF11-215ENST00000551391 FAM161AQ3B820 660 aa8.05□□□□□ -1.12
SCAF11-215ENST00000551391 RSPH4AQ5TD94 716 aa8.05□□□□□ -1.12
SCAF11-215ENST00000551391 ACTN4O43707 911 aaKnown RBP8.04□□□□□ -1.12
SCAF11-215ENST00000551391 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
SCAF11-215ENST00000551391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.03□□□□□ -1.12
SCAF11-215ENST00000551391 NR1I2O75469 434 aa8.03□□□□□ -1.12
SCAF11-215ENST00000551391 OATP04181 439 aa8.03□□□□□ -1.12
SCAF11-215ENST00000551391 PRKCSHP14314 528 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-215ENST00000551391 TLL1O43897 1013 aa8.02□□□□□ -1.13
SCAF11-215ENST00000551391 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
SCAF11-215ENST00000551391 S1PR4O95977 384 aa8.01□□□□□ -1.13
SCAF11-215ENST00000551391 PKDCCQ504Y2 493 aa8□□□□□ -1.13
SCAF11-215ENST00000551391 RBM26Q5T8P6 1007 aaKnown RBP8□□□□□ -1.13
SCAF11-215ENST00000551391 SPRYD7Q5W111 196 aa8□□□□□ -1.13
SCAF11-215ENST00000551391 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
SCAF11-215ENST00000551391 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-215ENST00000551391 ADH1BP00325 375 aa7.99□□□□□ -1.13
SCAF11-215ENST00000551391 SLC10A3P09131 477 aa7.99□□□□□ -1.13
SCAF11-215ENST00000551391 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
SCAF11-215ENST00000551391 PXYLP1Q8TE99 480 aa7.98□□□□□ -1.13
SCAF11-215ENST00000551391 SLC6A16Q9GZN6 736 aa7.98□□□□□ -1.13
SCAF11-215ENST00000551391 DGAT1O75907 488 aa7.97□□□□□ -1.13
SCAF11-215ENST00000551391 HIC1Q14526 733 aa7.97□□□□□ -1.13
SCAF11-215ENST00000551391 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
SCAF11-215ENST00000551391 PRR20EP86478 221 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 PRR20CP86479 221 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 PRR20DP86480 221 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 PRR20BP86481 221 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 PRR20AP86496 221 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 TRIM67Q6ZTA4 783 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.14
SCAF11-215ENST00000551391 ZMYND10O75800 440 aa7.95□□□□□ -1.14
SCAF11-215ENST00000551391 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
SCAF11-215ENST00000551391 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-215ENST00000551391 PUS10Q3MIT2 529 aaKnown RBP7.94□□□□□ -1.14
SCAF11-215ENST00000551391 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
SCAF11-215ENST00000551391 RDH13Q8NBN7 331 aa7.94□□□□□ -1.14
SCAF11-215ENST00000551391 SPSB2Q99619 263 aa7.94□□□□□ -1.14
SCAF11-215ENST00000551391 FAM187AA6NFU0 413 aa7.93□□□□□ -1.14
SCAF11-215ENST00000551391 GPR37O15354 613 aa7.93□□□□□ -1.14
SCAF11-215ENST00000551391 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
SCAF11-215ENST00000551391 TNFRSF10AO00220 468 aa7.92□□□□□ -1.14
SCAF11-215ENST00000551391 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-215ENST00000551391 GNPATO15228 680 aa7.91□□□□□ -1.14
SCAF11-215ENST00000551391 MYT1Q01538 1121 aa7.91□□□□□ -1.14
SCAF11-215ENST00000551391 DDX11L8A8MPP1 907 aa7.9□□□□□ -1.14
SCAF11-215ENST00000551391 GDF9O60383 454 aa7.9□□□□□ -1.14
SCAF11-215ENST00000551391 ZNF775Q96BV0 537 aaPredicted RBP7.9□□□□□ -1.14
SCAF11-215ENST00000551391 FOXC1Q12948 553 aa7.89□□□□□ -1.15
SCAF11-215ENST00000551391 CD2BP2O95400 341 aaKnown RBP7.88□□□□□ -1.15
SCAF11-215ENST00000551391 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
SCAF11-215ENST00000551391 PLA2G2CQ5R387 149 aa7.88□□□□□ -1.15
SCAF11-215ENST00000551391 SULF1Q8IWU6 871 aa7.88□□□□□ -1.15
SCAF11-215ENST00000551391 FMNL1O95466 1100 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-215ENST00000551391 FECHP22830 423 aa7.87□□□□□ -1.15
SCAF11-215ENST00000551391 FUT2Q10981 343 aa7.86□□□□□ -1.15
SCAF11-215ENST00000551391 MORN1Q5T089 497 aa7.86□□□□□ -1.15
SCAF11-215ENST00000551391 MINK1Q8N4C8 1332 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-215ENST00000551391 RPIAP49247 311 aa7.85□□□□□ -1.15
SCAF11-215ENST00000551391 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
SCAF11-215ENST00000551391 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
SCAF11-215ENST00000551391 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-215ENST00000551391 GCGRP47871 477 aa7.84□□□□□ -1.15
SCAF11-215ENST00000551391 KRI1Q8N9T8 703 aaKnown RBP7.84□□□□□ -1.15
SCAF11-215ENST00000551391 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
SCAF11-215ENST00000551391 SLC24A3Q9HC58 644 aa7.84□□□□□ -1.15
SCAF11-215ENST00000551391 MAP2K5Q13163 448 aa7.83□□□□□ -1.16
SCAF11-215ENST00000551391 AK7Q96M32 723 aa7.83□□□□□ -1.16
SCAF11-215ENST00000551391 PKD2L1Q9P0L9 805 aa7.83□□□□□ -1.16
SCAF11-215ENST00000551391 SLC27A5Q9Y2P5 690 aa7.83□□□□□ -1.16
SCAF11-215ENST00000551391 IRF6O14896 467 aa7.82□□□□□ -1.16
SCAF11-215ENST00000551391 CYP4X1Q8N118 509 aa7.82□□□□□ -1.16
SCAF11-215ENST00000551391 THAP11Q96EK4 314 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms