RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ARHGAP31Q2M1Z3 1444 aa15.93■□□□□ 0.14
RAB5C-208ENST00000551338 ARHGEF40Q8TER5 1519 aa15.92■□□□□ 0.14
RAB5C-208ENST00000551338 MYOM1P52179 1685 aa15.92■□□□□ 0.14
RAB5C-208ENST00000551338 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
RAB5C-208ENST00000551338 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
RAB5C-208ENST00000551338 SETBP1Q9Y6X0 1596 aa15.91■□□□□ 0.14
RAB5C-208ENST00000551338 DISP3Q9P2K9 1392 aa15.9■□□□□ 0.14
RAB5C-208ENST00000551338 TESK2Q96S53 571 aa15.9■□□□□ 0.14
RAB5C-208ENST00000551338 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
RAB5C-208ENST00000551338 CCDC184Q52MB2 194 aa15.89■□□□□ 0.13
RAB5C-208ENST00000551338 NEXMIFQ5QGS0 1516 aa15.89■□□□□ 0.13
RAB5C-208ENST00000551338 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
RAB5C-208ENST00000551338 WASHC2CQ9Y4E1 1318 aa15.88■□□□□ 0.13
RAB5C-208ENST00000551338 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
RAB5C-208ENST00000551338 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
RAB5C-208ENST00000551338 QRICH2Q9H0J4 1663 aa15.84■□□□□ 0.13
RAB5C-208ENST00000551338 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
RAB5C-208ENST00000551338 ADGRB1O14514 1584 aa15.83■□□□□ 0.13
RAB5C-208ENST00000551338 ARHGEF28Q8N1W1 1705 aaKnown RBP15.83■□□□□ 0.13
RAB5C-208ENST00000551338 ERVK-7P63135 1459 aa15.81■□□□□ 0.12
RAB5C-208ENST00000551338 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
RAB5C-208ENST00000551338 MRS2Q9HD23 443 aa15.81■□□□□ 0.12
RAB5C-208ENST00000551338 TMF1P82094 1093 aa15.8■□□□□ 0.12
RAB5C-208ENST00000551338 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
RAB5C-208ENST00000551338 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
RAB5C-208ENST00000551338 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
RAB5C-208ENST00000551338 SPATA31D1Q6ZQQ2 1576 aa15.79■□□□□ 0.12
RAB5C-208ENST00000551338 CHGAP10645 457 aaKnown RBP15.78■□□□□ 0.12
RAB5C-208ENST00000551338 PARD3Q8TEW0 1356 aa15.77■□□□□ 0.12
RAB5C-208ENST00000551338 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.11
RAB5C-208ENST00000551338 HNRNPUQ00839 825 aaKnown RBP eCLIP15.76■□□□□ 0.11
RAB5C-208ENST00000551338 PER1O15534 1290 aaPredicted RBP15.75■□□□□ 0.11
RAB5C-208ENST00000551338 SBNO2Q9Y2G9 1366 aa15.75■□□□□ 0.11
RAB5C-208ENST00000551338 ZFYVE9O95405 1425 aa15.74■□□□□ 0.11
RAB5C-208ENST00000551338 RALBP1Q15311 655 aa15.73■□□□□ 0.11
RAB5C-208ENST00000551338 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
RAB5C-208ENST00000551338 SETD1AO15047 1707 aaKnown RBP15.73■□□□□ 0.11
RAB5C-208ENST00000551338 BRD4O60885 1362 aaPredicted RBP15.73■□□□□ 0.11
RAB5C-208ENST00000551338 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
RAB5C-208ENST00000551338 IDI1Q13907 227 aa15.72■□□□□ 0.11
RAB5C-208ENST00000551338 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-208ENST00000551338 C14orf93Q9H972 538 aaKnown RBP15.72■□□□□ 0.11
RAB5C-208ENST00000551338 SLC52A1Q9NWF4 448 aa15.72■□□□□ 0.11
RAB5C-208ENST00000551338 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
RAB5C-208ENST00000551338 PANK3Q9H999 370 aa15.69■□□□□ 0.1
RAB5C-208ENST00000551338 LRPPRCP42704 1394 aaKnown RBP15.69■□□□□ 0.1
RAB5C-208ENST00000551338 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
RAB5C-208ENST00000551338 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
RAB5C-208ENST00000551338 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-208ENST00000551338 SUPT16HQ9Y5B9 1047 aaKnown RBP15.67■□□□□ 0.1
RAB5C-208ENST00000551338 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-208ENST00000551338 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
RAB5C-208ENST00000551338 TULP4Q9NRJ4 1543 aa15.66■□□□□ 0.1
RAB5C-208ENST00000551338 A2ML1A8K2U0 1454 aa15.65■□□□□ 0.1
RAB5C-208ENST00000551338 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
RAB5C-208ENST00000551338 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
RAB5C-208ENST00000551338 VGFO15240 615 aaPredicted RBP15.65■□□□□ 0.1
RAB5C-208ENST00000551338 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
RAB5C-208ENST00000551338 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
RAB5C-208ENST00000551338 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
RAB5C-208ENST00000551338 NUTM2DQ5VT03 806 aaPredicted RBP15.63■□□□□ 0.09
RAB5C-208ENST00000551338 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
RAB5C-208ENST00000551338 TMC1Q8TDI8 760 aa15.63■□□□□ 0.09
RAB5C-208ENST00000551338 MLECQ14165 292 aa15.62■□□□□ 0.09
RAB5C-208ENST00000551338 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
RAB5C-208ENST00000551338 TMEM132EQ6IEE7 984 aa15.62■□□□□ 0.09
RAB5C-208ENST00000551338 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
RAB5C-208ENST00000551338 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
RAB5C-208ENST00000551338 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
RAB5C-208ENST00000551338 PTPRMP28827 1452 aa15.61■□□□□ 0.09
RAB5C-208ENST00000551338 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
RAB5C-208ENST00000551338 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
RAB5C-208ENST00000551338 C3P01024 1663 aa15.6■□□□□ 0.09
RAB5C-208ENST00000551338 RIMS2Q9UQ26 1411 aa15.59■□□□□ 0.09
RAB5C-208ENST00000551338 ZMYM3Q14202 1370 aa15.58■□□□□ 0.08
RAB5C-208ENST00000551338 BLMP54132 1417 aaPredicted RBP15.58■□□□□ 0.08
RAB5C-208ENST00000551338 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
RAB5C-208ENST00000551338 INSRP06213 1382 aa15.57■□□□□ 0.08
RAB5C-208ENST00000551338 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
RAB5C-208ENST00000551338 DLC1Q96QB1 1528 aa15.57■□□□□ 0.08
RAB5C-208ENST00000551338 ANKRD26Q9UPS8 1709 aa15.57■□□□□ 0.08
RAB5C-208ENST00000551338 FKBP8Q14318 412 aa15.56■□□□□ 0.08
RAB5C-208ENST00000551338 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
RAB5C-208ENST00000551338 TNRQ92752 1358 aa15.54■□□□□ 0.08
RAB5C-208ENST00000551338 NEFLP07196 543 aa15.54■□□□□ 0.08
RAB5C-208ENST00000551338 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
RAB5C-208ENST00000551338 SHPRHQ149N8 1683 aa15.52■□□□□ 0.08
RAB5C-208ENST00000551338 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.08
RAB5C-208ENST00000551338 CARD14Q9BXL6 1004 aa15.52■□□□□ 0.08
RAB5C-208ENST00000551338 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
RAB5C-208ENST00000551338 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
RAB5C-208ENST00000551338 KIF20BQ96Q89 1820 aa15.51■□□□□ 0.07
RAB5C-208ENST00000551338 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
RAB5C-208ENST00000551338 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
RAB5C-208ENST00000551338 CPS1P31327 1500 aa15.48■□□□□ 0.07
RAB5C-208ENST00000551338 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
RAB5C-208ENST00000551338 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
RAB5C-208ENST00000551338 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
RAB5C-208ENST00000551338 BCANQ96GW7 911 aa15.47■□□□□ 0.07
RAB5C-208ENST00000551338 STK26Q9P289 416 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms