RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 SPRYD7Q5W111 196 aa12.31□□□□□ -0.44
ATP2B1-208ENST00000551009 TATDN2Q93075 761 aa12.31□□□□□ -0.44
ATP2B1-208ENST00000551009 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
ATP2B1-208ENST00000551009 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
ATP2B1-208ENST00000551009 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
ATP2B1-208ENST00000551009 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
ATP2B1-208ENST00000551009 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
ATP2B1-208ENST00000551009 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
ATP2B1-208ENST00000551009 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
ATP2B1-208ENST00000551009 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
ATP2B1-208ENST00000551009 ZPR1O75312 459 aa12.27□□□□□ -0.45
ATP2B1-208ENST00000551009 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
ATP2B1-208ENST00000551009 STK17AQ9UEE5 414 aa12.27□□□□□ -0.45
ATP2B1-208ENST00000551009 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
ATP2B1-208ENST00000551009 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
ATP2B1-208ENST00000551009 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
ATP2B1-208ENST00000551009 LOC100996750A0A140TA64 210 aa12.24□□□□□ -0.45
ATP2B1-208ENST00000551009 SEMA3EO15041 775 aa12.24□□□□□ -0.45
ATP2B1-208ENST00000551009 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
ATP2B1-208ENST00000551009 KRTAP4-6Q9BYQ5 205 aa12.24□□□□□ -0.45
ATP2B1-208ENST00000551009 GDF9O60383 454 aa12.23□□□□□ -0.45
ATP2B1-208ENST00000551009 WFS1O76024 890 aa12.23□□□□□ -0.45
ATP2B1-208ENST00000551009 TNFRSF10AO00220 468 aa12.22□□□□□ -0.45
ATP2B1-208ENST00000551009 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
ATP2B1-208ENST00000551009 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
ATP2B1-208ENST00000551009 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
ATP2B1-208ENST00000551009 PTGDRQ13258 359 aa12.2□□□□□ -0.46
ATP2B1-208ENST00000551009 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
ATP2B1-208ENST00000551009 SWT1Q5T5J6 900 aaKnown RBP12.17□□□□□ -0.46
ATP2B1-208ENST00000551009 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
ATP2B1-208ENST00000551009 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
ATP2B1-208ENST00000551009 WIPF1O43516 503 aa12.16□□□□□ -0.46
ATP2B1-208ENST00000551009 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
ATP2B1-208ENST00000551009 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
ATP2B1-208ENST00000551009 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
ATP2B1-208ENST00000551009 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
ATP2B1-208ENST00000551009 EYA1Q99502 592 aa12.14□□□□□ -0.47
ATP2B1-208ENST00000551009 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
ATP2B1-208ENST00000551009 TLL1O43897 1013 aa12.13□□□□□ -0.47
ATP2B1-208ENST00000551009 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
ATP2B1-208ENST00000551009 INSM1Q01101 510 aaPredicted RBP12.12□□□□□ -0.47
ATP2B1-208ENST00000551009 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
ATP2B1-208ENST00000551009 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
ATP2B1-208ENST00000551009 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
ATP2B1-208ENST00000551009 FCHSD2O94868 740 aa12.09□□□□□ -0.47
ATP2B1-208ENST00000551009 S1PR4O95977 384 aa12.09□□□□□ -0.47
ATP2B1-208ENST00000551009 LCE2CQ5TA81 110 aa12.09□□□□□ -0.47
ATP2B1-208ENST00000551009 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
ATP2B1-208ENST00000551009 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
ATP2B1-208ENST00000551009 ADGRG1Q9Y653 693 aa12.08□□□□□ -0.48
ATP2B1-208ENST00000551009 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
ATP2B1-208ENST00000551009 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
ATP2B1-208ENST00000551009 C11orf95C9JLR9 678 aaPredicted RBP12.05□□□□□ -0.48
ATP2B1-208ENST00000551009 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
ATP2B1-208ENST00000551009 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
ATP2B1-208ENST00000551009 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
ATP2B1-208ENST00000551009 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
ATP2B1-208ENST00000551009 DNAJB2P25686 324 aa12.03□□□□□ -0.48
ATP2B1-208ENST00000551009 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
ATP2B1-208ENST00000551009 AVPP01185 164 aa12.01□□□□□ -0.49
ATP2B1-208ENST00000551009 HIC1Q14526 733 aa12.01□□□□□ -0.49
ATP2B1-208ENST00000551009 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
ATP2B1-208ENST00000551009 FOXC1Q12948 553 aa12□□□□□ -0.49
ATP2B1-208ENST00000551009 RCCD1A6NED2 376 aa11.99□□□□□ -0.49
ATP2B1-208ENST00000551009 GPR37O15354 613 aa11.99□□□□□ -0.49
ATP2B1-208ENST00000551009 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
ATP2B1-208ENST00000551009 AXIN1O15169 862 aa11.97□□□□□ -0.49
ATP2B1-208ENST00000551009 FECHP22830 423 aa11.96□□□□□ -0.49
ATP2B1-208ENST00000551009 PXYLP1Q8TE99 480 aa11.96□□□□□ -0.49
ATP2B1-208ENST00000551009 GNPATO15228 680 aa11.95□□□□□ -0.5
ATP2B1-208ENST00000551009 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
ATP2B1-208ENST00000551009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
ATP2B1-208ENST00000551009 ADH1BP00325 375 aa11.94□□□□□ -0.5
ATP2B1-208ENST00000551009 OATP04181 439 aa11.94□□□□□ -0.5
ATP2B1-208ENST00000551009 TOR4AQ9NXH8 423 aa11.94□□□□□ -0.5
ATP2B1-208ENST00000551009 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
ATP2B1-208ENST00000551009 TERTO14746 1132 aaKnown RBP11.91□□□□□ -0.5
ATP2B1-208ENST00000551009 SMCPP49901 116 aaPredicted RBP11.91□□□□□ -0.5
ATP2B1-208ENST00000551009 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
ATP2B1-208ENST00000551009 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
ATP2B1-208ENST00000551009 SLC6A16Q9GZN6 736 aa11.9□□□□□ -0.5
ATP2B1-208ENST00000551009 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
ATP2B1-208ENST00000551009 SLC10A3P09131 477 aa11.88□□□□□ -0.51
ATP2B1-208ENST00000551009 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
ATP2B1-208ENST00000551009 CFHP08603 1231 aa11.87□□□□□ -0.51
ATP2B1-208ENST00000551009 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
ATP2B1-208ENST00000551009 CYP4X1Q8N118 509 aa11.85□□□□□ -0.51
ATP2B1-208ENST00000551009 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
ATP2B1-208ENST00000551009 SUZ12Q15022 739 aaKnown RBP11.82□□□□□ -0.52
ATP2B1-208ENST00000551009 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
ATP2B1-208ENST00000551009 LORP23490 312 aaPredicted RBP11.81□□□□□ -0.52
ATP2B1-208ENST00000551009 RPIAP49247 311 aa11.81□□□□□ -0.52
ATP2B1-208ENST00000551009 ATP13A2Q9NQ11 1180 aa11.81□□□□□ -0.52
ATP2B1-208ENST00000551009 FAM181BA6NEQ2 426 aa11.8□□□□□ -0.52
ATP2B1-208ENST00000551009 NR1I2O75469 434 aa11.8□□□□□ -0.52
ATP2B1-208ENST00000551009 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
ATP2B1-208ENST00000551009 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
ATP2B1-208ENST00000551009 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
ATP2B1-208ENST00000551009 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
ATP2B1-208ENST00000551009 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms