RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 TRIM66O15016 1216 aa9.79□□□□□ -0.84
SMARCC2-211ENST00000550859 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
SMARCC2-211ENST00000550859 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
SMARCC2-211ENST00000550859 RNF40O75150 1001 aa9.78□□□□□ -0.84
SMARCC2-211ENST00000550859 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
SMARCC2-211ENST00000550859 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
SMARCC2-211ENST00000550859 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
SMARCC2-211ENST00000550859 CLCN1P35523 988 aa9.77□□□□□ -0.85
SMARCC2-211ENST00000550859 PPP4CP60510 307 aa9.77□□□□□ -0.85
SMARCC2-211ENST00000550859 THSD4Q6ZMP0 1018 aa9.77□□□□□ -0.85
SMARCC2-211ENST00000550859 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
SMARCC2-211ENST00000550859 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
SMARCC2-211ENST00000550859 BCAMP50895 628 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 PTPN5P54829 565 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 AMHR2Q16671 573 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
SMARCC2-211ENST00000550859 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
SMARCC2-211ENST00000550859 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
SMARCC2-211ENST00000550859 PDE4DQ08499 809 aa9.72□□□□□ -0.85
SMARCC2-211ENST00000550859 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
SMARCC2-211ENST00000550859 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
SMARCC2-211ENST00000550859 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
SMARCC2-211ENST00000550859 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
SMARCC2-211ENST00000550859 SSTR3P32745 418 aaPredicted RBP9.68□□□□□ -0.86
SMARCC2-211ENST00000550859 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
SMARCC2-211ENST00000550859 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
SMARCC2-211ENST00000550859 KMT5BQ4FZB7 885 aa9.67□□□□□ -0.86
SMARCC2-211ENST00000550859 GIGYF2Q6Y7W6 1299 aaKnown RBP9.67□□□□□ -0.86
SMARCC2-211ENST00000550859 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
SMARCC2-211ENST00000550859 FAM217BQ9NTX9 383 aaPredicted RBP9.67□□□□□ -0.86
SMARCC2-211ENST00000550859 SLC10A3P09131 477 aa9.66□□□□□ -0.86
SMARCC2-211ENST00000550859 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
SMARCC2-211ENST00000550859 CFHP08603 1231 aa9.64□□□□□ -0.87
SMARCC2-211ENST00000550859 CD46P15529 392 aa9.63□□□□□ -0.87
SMARCC2-211ENST00000550859 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
SMARCC2-211ENST00000550859 GCGRP47871 477 aa9.62□□□□□ -0.87
SMARCC2-211ENST00000550859 APLP1P51693 650 aa9.61□□□□□ -0.87
SMARCC2-211ENST00000550859 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
SMARCC2-211ENST00000550859 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
SMARCC2-211ENST00000550859 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-211ENST00000550859 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
SMARCC2-211ENST00000550859 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
SMARCC2-211ENST00000550859 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
SMARCC2-211ENST00000550859 KDM4AO75164 1064 aa9.58□□□□□ -0.88
SMARCC2-211ENST00000550859 MS4A1P11836 297 aa9.58□□□□□ -0.88
SMARCC2-211ENST00000550859 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
SMARCC2-211ENST00000550859 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
SMARCC2-211ENST00000550859 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
SMARCC2-211ENST00000550859 USP46P62068 366 aa9.57□□□□□ -0.88
SMARCC2-211ENST00000550859 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
SMARCC2-211ENST00000550859 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
SMARCC2-211ENST00000550859 FUT2Q10981 343 aa9.55□□□□□ -0.88
SMARCC2-211ENST00000550859 NR1I2O75469 434 aa9.53□□□□□ -0.88
SMARCC2-211ENST00000550859 COPS2P61201 443 aa9.53□□□□□ -0.88
SMARCC2-211ENST00000550859 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
SMARCC2-211ENST00000550859 KCNC4Q03721 635 aa9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 MTRQ99707 1265 aa9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
SMARCC2-211ENST00000550859 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
SMARCC2-211ENST00000550859 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
SMARCC2-211ENST00000550859 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
SMARCC2-211ENST00000550859 MORN1Q5T089 497 aa9.5□□□□□ -0.89
SMARCC2-211ENST00000550859 HOXA2O43364 376 aa9.49□□□□□ -0.89
SMARCC2-211ENST00000550859 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
SMARCC2-211ENST00000550859 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
SMARCC2-211ENST00000550859 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-211ENST00000550859 Q3C1V9 767 aa9.48□□□□□ -0.89
SMARCC2-211ENST00000550859 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
SMARCC2-211ENST00000550859 ZPR1O75312 459 aa9.47□□□□□ -0.89
SMARCC2-211ENST00000550859 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-211ENST00000550859 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
SMARCC2-211ENST00000550859 MOXD2PA6NHM9 499 aa9.46□□□□□ -0.9
SMARCC2-211ENST00000550859 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
SMARCC2-211ENST00000550859 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
SMARCC2-211ENST00000550859 FDX1P10109 184 aa9.45□□□□□ -0.9
SMARCC2-211ENST00000550859 NDUFV2P19404 249 aa9.45□□□□□ -0.9
SMARCC2-211ENST00000550859 GJA5P36382 358 aa9.45□□□□□ -0.9
SMARCC2-211ENST00000550859 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
SMARCC2-211ENST00000550859 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
SMARCC2-211ENST00000550859 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
SMARCC2-211ENST00000550859 PLEKHG3A1L390 1219 aa9.43□□□□□ -0.9
SMARCC2-211ENST00000550859 SKIV2LQ15477 1246 aaKnown RBP9.43□□□□□ -0.9
SMARCC2-211ENST00000550859 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-211ENST00000550859 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
SMARCC2-211ENST00000550859 SPTLC1O15269 473 aa9.42□□□□□ -0.9
SMARCC2-211ENST00000550859 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
SMARCC2-211ENST00000550859 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
SMARCC2-211ENST00000550859 HLA-CQ95604 372 aa9.42□□□□□ -0.9
SMARCC2-211ENST00000550859 SPSB2Q99619 263 aa9.42□□□□□ -0.9
SMARCC2-211ENST00000550859 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
SMARCC2-211ENST00000550859 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
SMARCC2-211ENST00000550859 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
SMARCC2-211ENST00000550859 ADH1BP00325 375 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms