RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
GNPTAB-208ENST00000550718 IL21Q9HBE4 155 aa13.18□□□□□ -0.3
GNPTAB-208ENST00000550718 MTRQ99707 1265 aa13.17□□□□□ -0.3
GNPTAB-208ENST00000550718 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
GNPTAB-208ENST00000550718 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
GNPTAB-208ENST00000550718 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
GNPTAB-208ENST00000550718 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
GNPTAB-208ENST00000550718 FECHP22830 423 aa13.1□□□□□ -0.31
GNPTAB-208ENST00000550718 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
GNPTAB-208ENST00000550718 ACTN4O43707 911 aaKnown RBP13.06□□□□□ -0.32
GNPTAB-208ENST00000550718 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
GNPTAB-208ENST00000550718 ZNF516Q92618 1163 aa13.05□□□□□ -0.32
GNPTAB-208ENST00000550718 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
GNPTAB-208ENST00000550718 SLC10A3P09131 477 aa13.04□□□□□ -0.32
GNPTAB-208ENST00000550718 ZPR1O75312 459 aa13.03□□□□□ -0.32
GNPTAB-208ENST00000550718 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
GNPTAB-208ENST00000550718 CFHP08603 1231 aa13.02□□□□□ -0.33
GNPTAB-208ENST00000550718 COPS2P61201 443 aa13.01□□□□□ -0.33
GNPTAB-208ENST00000550718 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
GNPTAB-208ENST00000550718 PPP1R18Q6NYC8 613 aa12.99□□□□□ -0.33
GNPTAB-208ENST00000550718 BLOC1S3Q6QNY0 202 aa12.98□□□□□ -0.33
GNPTAB-208ENST00000550718 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
GNPTAB-208ENST00000550718 GGCXP38435 758 aa12.97□□□□□ -0.33
GNPTAB-208ENST00000550718 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
GNPTAB-208ENST00000550718 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.97□□□□□ -0.33
GNPTAB-208ENST00000550718 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
GNPTAB-208ENST00000550718 PHOX2BQ99453 314 aa12.96□□□□□ -0.33
GNPTAB-208ENST00000550718 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
GNPTAB-208ENST00000550718 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
GNPTAB-208ENST00000550718 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
GNPTAB-208ENST00000550718 IRF6O14896 467 aa12.94□□□□□ -0.34
GNPTAB-208ENST00000550718 NR1I2O75469 434 aa12.93□□□□□ -0.34
GNPTAB-208ENST00000550718 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
GNPTAB-208ENST00000550718 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
GNPTAB-208ENST00000550718 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
GNPTAB-208ENST00000550718 GCGRP47871 477 aa12.87□□□□□ -0.35
GNPTAB-208ENST00000550718 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
GNPTAB-208ENST00000550718 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
GNPTAB-208ENST00000550718 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
GNPTAB-208ENST00000550718 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
GNPTAB-208ENST00000550718 ADH1BP00325 375 aa12.85□□□□□ -0.35
GNPTAB-208ENST00000550718 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
GNPTAB-208ENST00000550718 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
GNPTAB-208ENST00000550718 TLL1O43897 1013 aa12.83□□□□□ -0.36
GNPTAB-208ENST00000550718 MORN1Q5T089 497 aa12.83□□□□□ -0.36
GNPTAB-208ENST00000550718 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
GNPTAB-208ENST00000550718 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
GNPTAB-208ENST00000550718 FUT2Q10981 343 aa12.82□□□□□ -0.36
GNPTAB-208ENST00000550718 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
GNPTAB-208ENST00000550718 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
GNPTAB-208ENST00000550718 CD46P15529 392 aa12.81□□□□□ -0.36
GNPTAB-208ENST00000550718 PUS10Q3MIT2 529 aaKnown RBP12.81□□□□□ -0.36
GNPTAB-208ENST00000550718 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
GNPTAB-208ENST00000550718 CLCN1P35523 988 aa12.78□□□□□ -0.36
GNPTAB-208ENST00000550718 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
GNPTAB-208ENST00000550718 SPSB2Q99619 263 aa12.78□□□□□ -0.36
GNPTAB-208ENST00000550718 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
GNPTAB-208ENST00000550718 ZMYND10O75800 440 aa12.77□□□□□ -0.37
GNPTAB-208ENST00000550718 S1PR4O95977 384 aa12.77□□□□□ -0.37
GNPTAB-208ENST00000550718 THAP11Q96EK4 314 aa12.77□□□□□ -0.37
GNPTAB-208ENST00000550718 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
GNPTAB-208ENST00000550718 MDM2Q00987 491 aaPredicted RBP12.76□□□□□ -0.37
GNPTAB-208ENST00000550718 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
GNPTAB-208ENST00000550718 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
GNPTAB-208ENST00000550718 USP46P62068 366 aa12.73□□□□□ -0.37
GNPTAB-208ENST00000550718 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
GNPTAB-208ENST00000550718 KDM4AO75164 1064 aa12.72□□□□□ -0.37
GNPTAB-208ENST00000550718 SLC19A1P41440 591 aa12.72□□□□□ -0.37
GNPTAB-208ENST00000550718 GFRA3O60609 400 aa12.71□□□□□ -0.37
GNPTAB-208ENST00000550718 BRICD5Q6PL45 260 aa12.71□□□□□ -0.37
GNPTAB-208ENST00000550718 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
GNPTAB-208ENST00000550718 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.37
GNPTAB-208ENST00000550718 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
GNPTAB-208ENST00000550718 Q3C1V9 767 aa12.7□□□□□ -0.38
GNPTAB-208ENST00000550718 EMID1Q96A84 441 aaPredicted RBP12.7□□□□□ -0.38
GNPTAB-208ENST00000550718 MSS51Q4VC12 460 aa12.68□□□□□ -0.38
GNPTAB-208ENST00000550718 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
GNPTAB-208ENST00000550718 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
GNPTAB-208ENST00000550718 AMHR2Q16671 573 aa12.67□□□□□ -0.38
GNPTAB-208ENST00000550718 Q6ZNB5 142 aa12.67□□□□□ -0.38
GNPTAB-208ENST00000550718 ZNF598Q86UK7 904 aaKnown RBP12.67□□□□□ -0.38
GNPTAB-208ENST00000550718 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
GNPTAB-208ENST00000550718 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.38
GNPTAB-208ENST00000550718 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
GNPTAB-208ENST00000550718 HOXA2O43364 376 aa12.63□□□□□ -0.39
GNPTAB-208ENST00000550718 RNF19BQ6ZMZ0 732 aa12.63□□□□□ -0.39
GNPTAB-208ENST00000550718 PRR20EP86478 221 aa12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 PRR20CP86479 221 aa12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 PRR20DP86480 221 aa12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 PRR20BP86481 221 aa12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 PRR20AP86496 221 aa12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 REPIN1Q9BWE0 567 aaKnown RBP12.62□□□□□ -0.39
GNPTAB-208ENST00000550718 RPIAP49247 311 aa12.61□□□□□ -0.39
GNPTAB-208ENST00000550718 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
GNPTAB-208ENST00000550718 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
GNPTAB-208ENST00000550718 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
GNPTAB-208ENST00000550718 MMP16P51512 607 aa12.59□□□□□ -0.39
GNPTAB-208ENST00000550718 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
GNPTAB-208ENST00000550718 ZNF697Q5TEC3 545 aa12.58□□□□□ -0.4
GNPTAB-208ENST00000550718 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms