RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 SNPHO15079 494 aa9.15□□□□□ -0.94
PTPRR-210ENST00000550661 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
PTPRR-210ENST00000550661 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-210ENST00000550661 CFDP1Q9UEE9 299 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-210ENST00000550661 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.95
PTPRR-210ENST00000550661 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
PTPRR-210ENST00000550661 KIAA1107Q9UPP5 1409 aa9.14□□□□□ -0.95
PTPRR-210ENST00000550661 PTPN23Q9H3S7 1636 aa9.14□□□□□ -0.95
PTPRR-210ENST00000550661 TSPOAP1O95153 1857 aa9.14□□□□□ -0.95
PTPRR-210ENST00000550661 KDM6BO15054 1643 aa9.13□□□□□ -0.95
PTPRR-210ENST00000550661 KIF3CO14782 793 aa9.13□□□□□ -0.95
PTPRR-210ENST00000550661 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
PTPRR-210ENST00000550661 RRBP1Q9P2E9 1410 aaKnown RBP9.13□□□□□ -0.95
PTPRR-210ENST00000550661 KDM5CP41229 1560 aa9.12□□□□□ -0.95
PTPRR-210ENST00000550661 ARHGEF5Q12774 1597 aa9.12□□□□□ -0.95
PTPRR-210ENST00000550661 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
PTPRR-210ENST00000550661 ZMYM4Q5VZL5 1548 aa9.12□□□□□ -0.95
PTPRR-210ENST00000550661 DENND4BO75064 1496 aaPredicted RBP9.12□□□□□ -0.95
PTPRR-210ENST00000550661 CCDC141Q6ZP82 1450 aa9.12□□□□□ -0.95
PTPRR-210ENST00000550661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRR-210ENST00000550661 SHANK2Q9UPX8 1470 aa9.11□□□□□ -0.95
PTPRR-210ENST00000550661 SCAPERQ9BY12 1400 aa9.11□□□□□ -0.95
PTPRR-210ENST00000550661 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
PTPRR-210ENST00000550661 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
PTPRR-210ENST00000550661 RICTORQ6R327 1708 aa9.1□□□□□ -0.95
PTPRR-210ENST00000550661 DNMT1P26358 1616 aaKnown RBP9.09□□□□□ -0.95
PTPRR-210ENST00000550661 HECW2Q9P2P5 1572 aa9.09□□□□□ -0.95
PTPRR-210ENST00000550661 INO80Q9ULG1 1556 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-210ENST00000550661 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
PTPRR-210ENST00000550661 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-210ENST00000550661 CROCC2H7BZ55 1655 aa9.09□□□□□ -0.95
PTPRR-210ENST00000550661 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
PTPRR-210ENST00000550661 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
PTPRR-210ENST00000550661 COL17A1Q9UMD9 1497 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-210ENST00000550661 MAST1Q9Y2H9 1570 aa9.08□□□□□ -0.96
PTPRR-210ENST00000550661 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-210ENST00000550661 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
PTPRR-210ENST00000550661 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
PTPRR-210ENST00000550661 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-210ENST00000550661 ARHGEF40Q8TER5 1519 aa9.08□□□□□ -0.96
PTPRR-210ENST00000550661 DAPK1P53355 1430 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 TRAPPC8Q9Y2L5 1435 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 ST18O60284 1047 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 PDE4AP27815 886 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 MLH3Q9UHC1 1453 aa9.07□□□□□ -0.96
PTPRR-210ENST00000550661 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-210ENST00000550661 NCKAP5LQ9HCH0 1330 aa9.06□□□□□ -0.96
PTPRR-210ENST00000550661 ATP7AQ04656 1500 aa9.06□□□□□ -0.96
PTPRR-210ENST00000550661 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
PTPRR-210ENST00000550661 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
PTPRR-210ENST00000550661 ZNF710Q8N1W2 664 aa9.06□□□□□ -0.96
PTPRR-210ENST00000550661 PLXNC1O60486 1568 aa9.06□□□□□ -0.96
PTPRR-210ENST00000550661 RTEL1-TNFRSF6BF6WH68 1400 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 FOXK1P85037 733 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 DSG2Q14126 1118 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 ABCC5O15440 1437 aa9.05□□□□□ -0.96
PTPRR-210ENST00000550661 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
PTPRR-210ENST00000550661 RAPGEF3O95398 923 aa9.04□□□□□ -0.96
PTPRR-210ENST00000550661 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
PTPRR-210ENST00000550661 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
PTPRR-210ENST00000550661 REREQ9P2R6 1566 aa9.03□□□□□ -0.96
PTPRR-210ENST00000550661 DIP2CQ9Y2E4 1556 aa9.03□□□□□ -0.96
PTPRR-210ENST00000550661 ABCA6Q8N139 1617 aa9.03□□□□□ -0.96
PTPRR-210ENST00000550661 HNRNPMP52272 730 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPRR-210ENST00000550661 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
PTPRR-210ENST00000550661 ADGBQ8N7X0 1667 aa9.03□□□□□ -0.96
PTPRR-210ENST00000550661 SPAG9O60271 1321 aaKnown RBP9.03□□□□□ -0.96
PTPRR-210ENST00000550661 KIDINS220Q9ULH0 1771 aa9.02□□□□□ -0.97
PTPRR-210ENST00000550661 PPP1R15BQ5SWA1 713 aa9.02□□□□□ -0.97
PTPRR-210ENST00000550661 AFAP1Q8N556 730 aa9.02□□□□□ -0.97
PTPRR-210ENST00000550661 ROCK1Q13464 1354 aa9.01□□□□□ -0.97
PTPRR-210ENST00000550661 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
PTPRR-210ENST00000550661 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
PTPRR-210ENST00000550661 YEATS2Q9ULM3 1422 aa9.01□□□□□ -0.97
PTPRR-210ENST00000550661 TSPY4P0CV99 314 aa9□□□□□ -0.97
PTPRR-210ENST00000550661 TSPY10P0CW01 314 aa9□□□□□ -0.97
PTPRR-210ENST00000550661 ANKRD30AQ9BXX3 1397 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 PTPRKQ15262 1439 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 MARVELD3Q96A59 401 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 ZSWIM6Q9HCJ5 1215 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 ATP10AO60312 1499 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 DUOX2Q9NRD8 1548 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 KIF15Q9NS87 1388 aa8.99□□□□□ -0.97
PTPRR-210ENST00000550661 EIF2AK4Q9P2K8 1649 aaKnown RBP8.98□□□□□ -0.97
PTPRR-210ENST00000550661 NCOA1Q15788 1441 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 A2MP01023 1474 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 POTEMA6NI47 508 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 MFSD10Q14728 455 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 POTEGQ6S5H5 508 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 AGLP35573 1532 aa8.98□□□□□ -0.97
PTPRR-210ENST00000550661 GCC2Q8IWJ2 1684 aa8.97□□□□□ -0.97
PTPRR-210ENST00000550661 HFM1A2PYH4 1435 aa8.97□□□□□ -0.97
PTPRR-210ENST00000550661 BCORL1Q5H9F3 1711 aa8.97□□□□□ -0.97
PTPRR-210ENST00000550661 SLC34A2O95436 690 aa8.97□□□□□ -0.97
PTPRR-210ENST00000550661 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms