RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
SCAF11-213ENST00000550629 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
SCAF11-213ENST00000550629 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
SCAF11-213ENST00000550629 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
SCAF11-213ENST00000550629 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
SCAF11-213ENST00000550629 GFRA3O60609 400 aa10.44□□□□□ -0.74
SCAF11-213ENST00000550629 CECR2Q9BXF3 1484 aa10.43□□□□□ -0.74
SCAF11-213ENST00000550629 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
SCAF11-213ENST00000550629 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
SCAF11-213ENST00000550629 GPR37O15354 613 aa10.42□□□□□ -0.74
SCAF11-213ENST00000550629 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
SCAF11-213ENST00000550629 APLP1P51693 650 aa10.41□□□□□ -0.74
SCAF11-213ENST00000550629 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
SCAF11-213ENST00000550629 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-213ENST00000550629 HIC1Q14526 733 aa10.4□□□□□ -0.74
SCAF11-213ENST00000550629 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
SCAF11-213ENST00000550629 GPIHBP1Q8IV16 184 aa10.4□□□□□ -0.74
SCAF11-213ENST00000550629 ZNF775Q96BV0 537 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-213ENST00000550629 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
SCAF11-213ENST00000550629 FECHP22830 423 aa10.38□□□□□ -0.75
SCAF11-213ENST00000550629 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
SCAF11-213ENST00000550629 EYA1Q99502 592 aa10.38□□□□□ -0.75
SCAF11-213ENST00000550629 GNPATO15228 680 aa10.37□□□□□ -0.75
SCAF11-213ENST00000550629 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
SCAF11-213ENST00000550629 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
SCAF11-213ENST00000550629 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
SCAF11-213ENST00000550629 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
SCAF11-213ENST00000550629 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
SCAF11-213ENST00000550629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
SCAF11-213ENST00000550629 COPS2P61201 443 aa10.35□□□□□ -0.75
SCAF11-213ENST00000550629 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
SCAF11-213ENST00000550629 CC2D2AQ9P2K1 1620 aa10.34□□□□□ -0.75
SCAF11-213ENST00000550629 GGCXP38435 758 aa10.34□□□□□ -0.75
SCAF11-213ENST00000550629 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
SCAF11-213ENST00000550629 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
SCAF11-213ENST00000550629 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-213ENST00000550629 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
SCAF11-213ENST00000550629 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
SCAF11-213ENST00000550629 V9GY48 417 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-213ENST00000550629 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
SCAF11-213ENST00000550629 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
SCAF11-213ENST00000550629 DNAJB2P25686 324 aa10.3□□□□□ -0.76
SCAF11-213ENST00000550629 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
SCAF11-213ENST00000550629 PXYLP1Q8TE99 480 aa10.3□□□□□ -0.76
SCAF11-213ENST00000550629 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
SCAF11-213ENST00000550629 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
SCAF11-213ENST00000550629 OATP04181 439 aa10.29□□□□□ -0.76
SCAF11-213ENST00000550629 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
SCAF11-213ENST00000550629 METTL3Q86U44 580 aaKnown RBP10.28□□□□□ -0.76
SCAF11-213ENST00000550629 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-213ENST00000550629 ZPR1O75312 459 aa10.27□□□□□ -0.77
SCAF11-213ENST00000550629 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
SCAF11-213ENST00000550629 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
SCAF11-213ENST00000550629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
SCAF11-213ENST00000550629 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
SCAF11-213ENST00000550629 WIZO95785 1651 aa10.23□□□□□ -0.77
SCAF11-213ENST00000550629 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
SCAF11-213ENST00000550629 KMT5BQ4FZB7 885 aa10.23□□□□□ -0.77
SCAF11-213ENST00000550629 BLOC1S3Q6QNY0 202 aa10.23□□□□□ -0.77
SCAF11-213ENST00000550629 TMUB1Q9BVT8 246 aa10.23□□□□□ -0.77
SCAF11-213ENST00000550629 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
SCAF11-213ENST00000550629 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
SCAF11-213ENST00000550629 IRF6O14896 467 aa10.21□□□□□ -0.77
SCAF11-213ENST00000550629 CFHP08603 1231 aa10.21□□□□□ -0.77
SCAF11-213ENST00000550629 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
SCAF11-213ENST00000550629 TLL1O43897 1013 aa10.2□□□□□ -0.78
SCAF11-213ENST00000550629 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
SCAF11-213ENST00000550629 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
SCAF11-213ENST00000550629 MINK1Q8N4C8 1332 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-213ENST00000550629 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
SCAF11-213ENST00000550629 ZMYND10O75800 440 aa10.17□□□□□ -0.78
SCAF11-213ENST00000550629 BCANQ96GW7 911 aa10.17□□□□□ -0.78
SCAF11-213ENST00000550629 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
SCAF11-213ENST00000550629 SLC10A3P09131 477 aa10.16□□□□□ -0.78
SCAF11-213ENST00000550629 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
SCAF11-213ENST00000550629 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
SCAF11-213ENST00000550629 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
SCAF11-213ENST00000550629 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
SCAF11-213ENST00000550629 SLC19A1P41440 591 aa10.14□□□□□ -0.79
SCAF11-213ENST00000550629 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
SCAF11-213ENST00000550629 NR1I2O75469 434 aa10.13□□□□□ -0.79
SCAF11-213ENST00000550629 S1PR4O95977 384 aa10.13□□□□□ -0.79
SCAF11-213ENST00000550629 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
SCAF11-213ENST00000550629 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
SCAF11-213ENST00000550629 ADH1BP00325 375 aa10.11□□□□□ -0.79
SCAF11-213ENST00000550629 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
SCAF11-213ENST00000550629 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-213ENST00000550629 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
SCAF11-213ENST00000550629 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-213ENST00000550629 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
SCAF11-213ENST00000550629 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
SCAF11-213ENST00000550629 SULF1Q8IWU6 871 aa10.07□□□□□ -0.8
SCAF11-213ENST00000550629 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
SCAF11-213ENST00000550629 LOC100996750A0A140TA64 210 aa10.06□□□□□ -0.8
SCAF11-213ENST00000550629 POTECB2RU33 542 aa10.06□□□□□ -0.8
SCAF11-213ENST00000550629 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
SCAF11-213ENST00000550629 TRIM67Q6ZTA4 783 aa10.06□□□□□ -0.8
SCAF11-213ENST00000550629 ZNF598Q86UK7 904 aaKnown RBP10.06□□□□□ -0.8
SCAF11-213ENST00000550629 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-213ENST00000550629 KRTAP4-6Q9BYQ5 205 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms