RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 SPATA31E1Q6ZUB1 1445 aa20.36■□□□□ 0.85
CACNB3-216ENST00000550391 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
CACNB3-216ENST00000550391 SLC52A1Q9NWF4 448 aa20.35■□□□□ 0.85
CACNB3-216ENST00000550391 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
CACNB3-216ENST00000550391 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.85
CACNB3-216ENST00000550391 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
CACNB3-216ENST00000550391 IDI1Q13907 227 aa20.32■□□□□ 0.84
CACNB3-216ENST00000550391 TNRQ92752 1358 aa20.31■□□□□ 0.84
CACNB3-216ENST00000550391 TMEM131LA2VDJ0 1609 aa20.29■□□□□ 0.84
CACNB3-216ENST00000550391 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
CACNB3-216ENST00000550391 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
CACNB3-216ENST00000550391 NLRP1Q9C000 1473 aa20.25■□□□□ 0.83
CACNB3-216ENST00000550391 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
CACNB3-216ENST00000550391 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
CACNB3-216ENST00000550391 IFT172Q9UG01 1749 aa20.24■□□□□ 0.83
CACNB3-216ENST00000550391 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
CACNB3-216ENST00000550391 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
CACNB3-216ENST00000550391 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
CACNB3-216ENST00000550391 PPLO60437 1756 aa20.21■□□□□ 0.83
CACNB3-216ENST00000550391 ALKQ9UM73 1620 aa20.21■□□□□ 0.83
CACNB3-216ENST00000550391 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
CACNB3-216ENST00000550391 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
CACNB3-216ENST00000550391 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
CACNB3-216ENST00000550391 NEXMIFQ5QGS0 1516 aa20.19■□□□□ 0.82
CACNB3-216ENST00000550391 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
CACNB3-216ENST00000550391 POTEAQ6S8J7 498 aa20.19■□□□□ 0.82
CACNB3-216ENST00000550391 POLR1AO95602 1720 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-216ENST00000550391 MYOM2P54296 1465 aa20.18■□□□□ 0.82
CACNB3-216ENST00000550391 NBPF8Q3BBV2 869 aa20.18■□□□□ 0.82
CACNB3-216ENST00000550391 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
CACNB3-216ENST00000550391 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
CACNB3-216ENST00000550391 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-216ENST00000550391 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
CACNB3-216ENST00000550391 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
CACNB3-216ENST00000550391 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
CACNB3-216ENST00000550391 ZFYVE9O95405 1425 aa20.12■□□□□ 0.81
CACNB3-216ENST00000550391 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
CACNB3-216ENST00000550391 TRPM1Q7Z4N2 1603 aa20.11■□□□□ 0.81
CACNB3-216ENST00000550391 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
CACNB3-216ENST00000550391 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
CACNB3-216ENST00000550391 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
CACNB3-216ENST00000550391 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
CACNB3-216ENST00000550391 SLIT1O75093 1534 aa20.09■□□□□ 0.81
CACNB3-216ENST00000550391 ARHGAP23Q9P227 1491 aa20.08■□□□□ 0.81
CACNB3-216ENST00000550391 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
CACNB3-216ENST00000550391 KIAA1210Q9ULL0 1709 aa20.07■□□□□ 0.8
CACNB3-216ENST00000550391 MED14O60244 1454 aa20.07■□□□□ 0.8
CACNB3-216ENST00000550391 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
CACNB3-216ENST00000550391 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-216ENST00000550391 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.06■□□□□ 0.8
CACNB3-216ENST00000550391 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
CACNB3-216ENST00000550391 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
CACNB3-216ENST00000550391 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
CACNB3-216ENST00000550391 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.8
CACNB3-216ENST00000550391 LAMC1P11047 1609 aa20.02■□□□□ 0.8
CACNB3-216ENST00000550391 GPRASP1Q5JY77 1395 aa20.02■□□□□ 0.8
CACNB3-216ENST00000550391 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
CACNB3-216ENST00000550391 LTKP29376 864 aa20■□□□□ 0.79
CACNB3-216ENST00000550391 NBPF1Q3BBV0 1214 aa20■□□□□ 0.79
CACNB3-216ENST00000550391 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
CACNB3-216ENST00000550391 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
CACNB3-216ENST00000550391 IQGAP1P46940 1657 aa20■□□□□ 0.79
CACNB3-216ENST00000550391 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
CACNB3-216ENST00000550391 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
CACNB3-216ENST00000550391 STRCP1A6NGW2 1772 aa19.99■□□□□ 0.79
CACNB3-216ENST00000550391 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
CACNB3-216ENST00000550391 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
CACNB3-216ENST00000550391 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
CACNB3-216ENST00000550391 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
CACNB3-216ENST00000550391 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
CACNB3-216ENST00000550391 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
CACNB3-216ENST00000550391 CARD11Q9BXL7 1154 aa19.97■□□□□ 0.79
CACNB3-216ENST00000550391 SRCAPQ6ZRS2 3230 aa19.97■□□□□ 0.79
CACNB3-216ENST00000550391 ADGRB1O14514 1584 aa19.95■□□□□ 0.78
CACNB3-216ENST00000550391 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
CACNB3-216ENST00000550391 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
CACNB3-216ENST00000550391 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
CACNB3-216ENST00000550391 USP47Q96K76 1375 aa19.91■□□□□ 0.78
CACNB3-216ENST00000550391 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
CACNB3-216ENST00000550391 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
CACNB3-216ENST00000550391 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-216ENST00000550391 TMEM132EQ6IEE7 984 aa19.88■□□□□ 0.77
CACNB3-216ENST00000550391 BCANQ96GW7 911 aa19.87■□□□□ 0.77
CACNB3-216ENST00000550391 METP08581 1390 aa19.85■□□□□ 0.77
CACNB3-216ENST00000550391 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
CACNB3-216ENST00000550391 ZNF772Q68DY9 489 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-216ENST00000550391 TBX22Q9Y458 520 aa19.84■□□□□ 0.77
CACNB3-216ENST00000550391 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
CACNB3-216ENST00000550391 XIRP1Q702N8 1843 aaKnown RBP19.83■□□□□ 0.76
CACNB3-216ENST00000550391 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
CACNB3-216ENST00000550391 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
CACNB3-216ENST00000550391 SLC26A8Q96RN1 970 aa19.82■□□□□ 0.76
CACNB3-216ENST00000550391 LRPPRCP42704 1394 aaKnown RBP19.82■□□□□ 0.76
CACNB3-216ENST00000550391 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
CACNB3-216ENST00000550391 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
CACNB3-216ENST00000550391 TRAK1Q9UPV9 953 aa19.8■□□□□ 0.76
CACNB3-216ENST00000550391 DLC1Q96QB1 1528 aa19.8■□□□□ 0.76
CACNB3-216ENST00000550391 JCADQ9P266 1359 aa19.8■□□□□ 0.76
CACNB3-216ENST00000550391 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
CACNB3-216ENST00000550391 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms