RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 E9PSI1 815 aa15.33■□□□□ 0.04
VDR-208ENST00000550325 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.04
VDR-208ENST00000550325 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
VDR-208ENST00000550325 A0A0U1RQG5 324 aaPredicted RBP15.32■□□□□ 0.04
VDR-208ENST00000550325 HSP90AB1P08238 724 aaKnown RBP15.32■□□□□ 0.04
VDR-208ENST00000550325 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
VDR-208ENST00000550325 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
VDR-208ENST00000550325 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
VDR-208ENST00000550325 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 PCDHB15Q9Y5E8 787 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 PLEKHH2Q8IVE3 1493 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 DDX11L8A8MPP1 907 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
VDR-208ENST00000550325 MSNP26038 577 aaKnown RBP15.3■□□□□ 0.04
VDR-208ENST00000550325 TESK2Q96S53 571 aa15.3■□□□□ 0.04
VDR-208ENST00000550325 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
VDR-208ENST00000550325 DNMT1P26358 1616 aaKnown RBP15.29■□□□□ 0.04
VDR-208ENST00000550325 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
VDR-208ENST00000550325 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
VDR-208ENST00000550325 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
VDR-208ENST00000550325 FTSJ3Q8IY81 847 aaKnown RBP15.28■□□□□ 0.04
VDR-208ENST00000550325 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
VDR-208ENST00000550325 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
VDR-208ENST00000550325 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
VDR-208ENST00000550325 TPM2P07951 284 aa15.27■□□□□ 0.03
VDR-208ENST00000550325 GAS2L3Q86XJ1 694 aa15.27■□□□□ 0.03
VDR-208ENST00000550325 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.03
VDR-208ENST00000550325 RLBP1P12271 317 aa15.26■□□□□ 0.03
VDR-208ENST00000550325 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
VDR-208ENST00000550325 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
VDR-208ENST00000550325 GBP4Q96PP9 640 aa15.25■□□□□ 0.03
VDR-208ENST00000550325 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
VDR-208ENST00000550325 TNPO1Q92973 898 aaKnown RBP15.24■□□□□ 0.03
VDR-208ENST00000550325 NASPP49321 788 aaPredicted RBP15.23■□□□□ 0.03
VDR-208ENST00000550325 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
VDR-208ENST00000550325 WDR62O43379 1518 aa15.22■□□□□ 0.03
VDR-208ENST00000550325 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
VDR-208ENST00000550325 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
VDR-208ENST00000550325 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
VDR-208ENST00000550325 WWC1Q8IX03 1113 aa15.21■□□□□ 0.02
VDR-208ENST00000550325 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
VDR-208ENST00000550325 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
VDR-208ENST00000550325 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
VDR-208ENST00000550325 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
VDR-208ENST00000550325 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
VDR-208ENST00000550325 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
VDR-208ENST00000550325 C9orf84Q5VXU9 1444 aa15.18■□□□□ 0.02
VDR-208ENST00000550325 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
VDR-208ENST00000550325 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
VDR-208ENST00000550325 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
VDR-208ENST00000550325 ARHGEF12Q9NZN5 1544 aa15.18■□□□□ 0.02
VDR-208ENST00000550325 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
VDR-208ENST00000550325 XPCQ01831 940 aaPredicted RBP15.17■□□□□ 0.02
VDR-208ENST00000550325 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
VDR-208ENST00000550325 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 NLRP1Q9C000 1473 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.16■□□□□ 0.02
VDR-208ENST00000550325 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
VDR-208ENST00000550325 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
VDR-208ENST00000550325 E9PCH4 1651 aa15.15■□□□□ 0.02
VDR-208ENST00000550325 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
VDR-208ENST00000550325 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
VDR-208ENST00000550325 INSRP06213 1382 aa15.15■□□□□ 0.02
VDR-208ENST00000550325 SSFA2P28290 1259 aa15.14■□□□□ 0.01
VDR-208ENST00000550325 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
VDR-208ENST00000550325 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
VDR-208ENST00000550325 MAGI2Q86UL8 1455 aa15.14■□□□□ 0.01
VDR-208ENST00000550325 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
VDR-208ENST00000550325 NUP153P49790 1475 aaKnown RBP15.14■□□□□ 0.01
VDR-208ENST00000550325 UQCRHLA0A096LP55 91 aa15.13■□□□□ 0.01
VDR-208ENST00000550325 UQCRHP07919 91 aa15.13■□□□□ 0.01
VDR-208ENST00000550325 CAVIN1Q6NZI2 390 aaKnown RBP15.13■□□□□ 0.01
VDR-208ENST00000550325 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
VDR-208ENST00000550325 ISY1Q9ULR0 285 aaKnown RBP15.13■□□□□ 0.01
VDR-208ENST00000550325 DNTTIP2Q5QJE6 756 aaKnown RBP15.13■□□□□ 0.01
VDR-208ENST00000550325 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
VDR-208ENST00000550325 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
VDR-208ENST00000550325 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
VDR-208ENST00000550325 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
VDR-208ENST00000550325 MVPQ14764 893 aaKnown RBP15.12■□□□□ 0.01
VDR-208ENST00000550325 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
VDR-208ENST00000550325 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
VDR-208ENST00000550325 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
VDR-208ENST00000550325 FOXD4L5Q5VV16 416 aaPredicted RBP15.11■□□□□ 0.01
VDR-208ENST00000550325 MPNDQ8N594 471 aa15.11■□□□□ 0.01
VDR-208ENST00000550325 FOXD4L4Q8WXT5 416 aaPredicted RBP15.11■□□□□ 0.01
VDR-208ENST00000550325 OFD1O75665 1012 aa15.11■□□□□ 0.01
VDR-208ENST00000550325 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
VDR-208ENST00000550325 PTMAP06454 111 aaKnown RBP15.1■□□□□ 0.01
VDR-208ENST00000550325 RIPK4P57078 832 aa15.1■□□□□ 0.01
VDR-208ENST00000550325 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
VDR-208ENST00000550325 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0.01
VDR-208ENST00000550325 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0.01
VDR-208ENST00000550325 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0.01
VDR-208ENST00000550325 NINLQ9Y2I6 1382 aa15.08■□□□□ 0
VDR-208ENST00000550325 A2MP01023 1474 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms