RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 SLIT1O75093 1534 aa12.57□□□□□ -0.4
ATXN2-220ENST00000550236 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
ATXN2-220ENST00000550236 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
ATXN2-220ENST00000550236 TMEM131LA2VDJ0 1609 aa12.55□□□□□ -0.4
ATXN2-220ENST00000550236 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
ATXN2-220ENST00000550236 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
ATXN2-220ENST00000550236 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
ATXN2-220ENST00000550236 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
ATXN2-220ENST00000550236 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
ATXN2-220ENST00000550236 CPS1P31327 1500 aa12.52□□□□□ -0.41
ATXN2-220ENST00000550236 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
ATXN2-220ENST00000550236 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
ATXN2-220ENST00000550236 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
ATXN2-220ENST00000550236 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
ATXN2-220ENST00000550236 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
ATXN2-220ENST00000550236 KIF1BO60333 1816 aa12.49□□□□□ -0.41
ATXN2-220ENST00000550236 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
ATXN2-220ENST00000550236 LRRC7Q96NW7 1537 aa12.49□□□□□ -0.41
ATXN2-220ENST00000550236 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
ATXN2-220ENST00000550236 TOM1O60784 492 aa12.47□□□□□ -0.41
ATXN2-220ENST00000550236 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
ATXN2-220ENST00000550236 PROSER2Q86WR7 435 aaPredicted RBP12.47□□□□□ -0.41
ATXN2-220ENST00000550236 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATXN2-220ENST00000550236 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.42
ATXN2-220ENST00000550236 PLEKHG1Q9ULL1 1385 aa12.45□□□□□ -0.42
ATXN2-220ENST00000550236 KCNA6P17658 529 aa12.45□□□□□ -0.42
ATXN2-220ENST00000550236 MAPK8IP2Q13387 824 aaPredicted RBP12.45□□□□□ -0.42
ATXN2-220ENST00000550236 HSPA1LP34931 641 aa12.44□□□□□ -0.42
ATXN2-220ENST00000550236 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
ATXN2-220ENST00000550236 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
ATXN2-220ENST00000550236 TRPM2O94759 1503 aa12.43□□□□□ -0.42
ATXN2-220ENST00000550236 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
ATXN2-220ENST00000550236 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
ATXN2-220ENST00000550236 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
ATXN2-220ENST00000550236 ADAMTS13Q76LX8 1427 aa12.41□□□□□ -0.42
ATXN2-220ENST00000550236 TBX22Q9Y458 520 aa12.41□□□□□ -0.42
ATXN2-220ENST00000550236 C14orf37Q86TY3 774 aa12.4□□□□□ -0.42
ATXN2-220ENST00000550236 RAB3GAP2Q9H2M9 1393 aa12.4□□□□□ -0.42
ATXN2-220ENST00000550236 NEXMIFQ5QGS0 1516 aa12.39□□□□□ -0.43
ATXN2-220ENST00000550236 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
ATXN2-220ENST00000550236 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
ATXN2-220ENST00000550236 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
ATXN2-220ENST00000550236 NWD1Q149M9 1564 aa12.38□□□□□ -0.43
ATXN2-220ENST00000550236 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
ATXN2-220ENST00000550236 PPLO60437 1756 aa12.37□□□□□ -0.43
ATXN2-220ENST00000550236 METP08581 1390 aa12.35□□□□□ -0.43
ATXN2-220ENST00000550236 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
ATXN2-220ENST00000550236 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
ATXN2-220ENST00000550236 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
ATXN2-220ENST00000550236 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
ATXN2-220ENST00000550236 MSH6P52701 1360 aa12.34□□□□□ -0.43
ATXN2-220ENST00000550236 SETBP1Q9Y6X0 1596 aa12.34□□□□□ -0.43
ATXN2-220ENST00000550236 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
ATXN2-220ENST00000550236 ROBO1Q9Y6N7 1651 aa12.33□□□□□ -0.44
ATXN2-220ENST00000550236 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
ATXN2-220ENST00000550236 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
ATXN2-220ENST00000550236 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
ATXN2-220ENST00000550236 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
ATXN2-220ENST00000550236 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
ATXN2-220ENST00000550236 SLAIN2Q9P270 581 aa12.31□□□□□ -0.44
ATXN2-220ENST00000550236 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
ATXN2-220ENST00000550236 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
ATXN2-220ENST00000550236 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
ATXN2-220ENST00000550236 ATF3P18847 181 aa12.3□□□□□ -0.44
ATXN2-220ENST00000550236 STK26Q9P289 416 aa12.3□□□□□ -0.44
ATXN2-220ENST00000550236 RPGRIP1LQ68CZ1 1315 aa12.3□□□□□ -0.44
ATXN2-220ENST00000550236 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
ATXN2-220ENST00000550236 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
ATXN2-220ENST00000550236 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
ATXN2-220ENST00000550236 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
ATXN2-220ENST00000550236 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
ATXN2-220ENST00000550236 SPATA31E1Q6ZUB1 1445 aa12.28□□□□□ -0.44
ATXN2-220ENST00000550236 MED1Q15648 1581 aaPredicted RBP12.27□□□□□ -0.44
ATXN2-220ENST00000550236 NALCNQ8IZF0 1738 aa12.27□□□□□ -0.45
ATXN2-220ENST00000550236 FAM135BQ49AJ0 1406 aa12.27□□□□□ -0.45
ATXN2-220ENST00000550236 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
ATXN2-220ENST00000550236 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
ATXN2-220ENST00000550236 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
ATXN2-220ENST00000550236 WAPLQ7Z5K2 1190 aa12.24□□□□□ -0.45
ATXN2-220ENST00000550236 DDX17Q92841 729 aaKnown RBP12.24□□□□□ -0.45
ATXN2-220ENST00000550236 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
ATXN2-220ENST00000550236 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
ATXN2-220ENST00000550236 NCOA3Q9Y6Q9 1424 aa12.23□□□□□ -0.45
ATXN2-220ENST00000550236 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
ATXN2-220ENST00000550236 DCAF11Q8TEB1 546 aa12.22□□□□□ -0.45
ATXN2-220ENST00000550236 BRINP3Q76B58 766 aa12.21□□□□□ -0.45
ATXN2-220ENST00000550236 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.46
ATXN2-220ENST00000550236 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
ATXN2-220ENST00000550236 HRCP23327 699 aa12.2□□□□□ -0.46
ATXN2-220ENST00000550236 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATXN2-220ENST00000550236 MST1RQ04912 1400 aa12.2□□□□□ -0.46
ATXN2-220ENST00000550236 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
ATXN2-220ENST00000550236 ORAI2Q96SN7 254 aa12.19□□□□□ -0.46
ATXN2-220ENST00000550236 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
ATXN2-220ENST00000550236 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
ATXN2-220ENST00000550236 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-220ENST00000550236 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-220ENST00000550236 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-220ENST00000550236 C14orf93Q9H972 538 aaKnown RBP12.18□□□□□ -0.46
ATXN2-220ENST00000550236 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms