RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
CACNB3-212ENST00000549971 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
CACNB3-212ENST00000549971 IDI1Q13907 227 aa17.52■□□□□ 0.4
CACNB3-212ENST00000549971 MLECQ14165 292 aa17.52■□□□□ 0.4
CACNB3-212ENST00000549971 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
CACNB3-212ENST00000549971 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
CACNB3-212ENST00000549971 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
CACNB3-212ENST00000549971 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
CACNB3-212ENST00000549971 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
CACNB3-212ENST00000549971 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-212ENST00000549971 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CACNB3-212ENST00000549971 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
CACNB3-212ENST00000549971 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
CACNB3-212ENST00000549971 TNRQ92752 1358 aa17.47■□□□□ 0.39
CACNB3-212ENST00000549971 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
CACNB3-212ENST00000549971 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
CACNB3-212ENST00000549971 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
CACNB3-212ENST00000549971 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
CACNB3-212ENST00000549971 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.38
CACNB3-212ENST00000549971 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
CACNB3-212ENST00000549971 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
CACNB3-212ENST00000549971 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-212ENST00000549971 C14orf93Q9H972 538 aaKnown RBP17.45■□□□□ 0.38
CACNB3-212ENST00000549971 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
CACNB3-212ENST00000549971 MIER1Q8N108 512 aa17.44■□□□□ 0.38
CACNB3-212ENST00000549971 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNB3-212ENST00000549971 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
CACNB3-212ENST00000549971 ANP32CO43423 234 aa17.43■□□□□ 0.38
CACNB3-212ENST00000549971 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
CACNB3-212ENST00000549971 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CACNB3-212ENST00000549971 TMF1P82094 1093 aa17.41■□□□□ 0.38
CACNB3-212ENST00000549971 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
CACNB3-212ENST00000549971 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
CACNB3-212ENST00000549971 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
CACNB3-212ENST00000549971 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-212ENST00000549971 TESK2Q96S53 571 aa17.38■□□□□ 0.37
CACNB3-212ENST00000549971 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
CACNB3-212ENST00000549971 C3P01024 1663 aa17.37■□□□□ 0.37
CACNB3-212ENST00000549971 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
CACNB3-212ENST00000549971 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
CACNB3-212ENST00000549971 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
CACNB3-212ENST00000549971 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
CACNB3-212ENST00000549971 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
CACNB3-212ENST00000549971 TMEM2Q9UHN6 1383 aa17.32■□□□□ 0.36
CACNB3-212ENST00000549971 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-212ENST00000549971 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
CACNB3-212ENST00000549971 KDM4FA0A1W2PPD8 638 aa17.3■□□□□ 0.36
CACNB3-212ENST00000549971 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
CACNB3-212ENST00000549971 SLIT1O75093 1534 aa17.29■□□□□ 0.36
CACNB3-212ENST00000549971 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
CACNB3-212ENST00000549971 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
CACNB3-212ENST00000549971 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
CACNB3-212ENST00000549971 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-212ENST00000549971 RIMS1Q86UR5 1692 aaKnown RBP17.26■□□□□ 0.35
CACNB3-212ENST00000549971 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CACNB3-212ENST00000549971 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
CACNB3-212ENST00000549971 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
CACNB3-212ENST00000549971 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
CACNB3-212ENST00000549971 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
CACNB3-212ENST00000549971 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
CACNB3-212ENST00000549971 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
CACNB3-212ENST00000549971 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
CACNB3-212ENST00000549971 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
CACNB3-212ENST00000549971 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
CACNB3-212ENST00000549971 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-212ENST00000549971 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
CACNB3-212ENST00000549971 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
CACNB3-212ENST00000549971 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
CACNB3-212ENST00000549971 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
CACNB3-212ENST00000549971 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
CACNB3-212ENST00000549971 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
CACNB3-212ENST00000549971 PTPRMP28827 1452 aa17.2■□□□□ 0.34
CACNB3-212ENST00000549971 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
CACNB3-212ENST00000549971 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CACNB3-212ENST00000549971 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CACNB3-212ENST00000549971 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
CACNB3-212ENST00000549971 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
CACNB3-212ENST00000549971 ILDR1Q86SU0 546 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-212ENST00000549971 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
CACNB3-212ENST00000549971 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CACNB3-212ENST00000549971 CPS1P31327 1500 aa17.16■□□□□ 0.34
CACNB3-212ENST00000549971 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
CACNB3-212ENST00000549971 POGKQ9P215 609 aa17.15■□□□□ 0.34
CACNB3-212ENST00000549971 MED14O60244 1454 aa17.15■□□□□ 0.34
CACNB3-212ENST00000549971 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
CACNB3-212ENST00000549971 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
CACNB3-212ENST00000549971 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
CACNB3-212ENST00000549971 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-212ENST00000549971 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CACNB3-212ENST00000549971 TBX22Q9Y458 520 aa17.14■□□□□ 0.33
CACNB3-212ENST00000549971 MYOM1P52179 1685 aa17.13■□□□□ 0.33
CACNB3-212ENST00000549971 BCANQ96GW7 911 aa17.12■□□□□ 0.33
CACNB3-212ENST00000549971 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
CACNB3-212ENST00000549971 STK26Q9P289 416 aa17.12■□□□□ 0.33
CACNB3-212ENST00000549971 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms