RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 SLC10A3P09131 477 aa11.26□□□□□ -0.61
ATP2B1-206ENST00000549727 HIC1Q14526 733 aa11.26□□□□□ -0.61
ATP2B1-206ENST00000549727 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
ATP2B1-206ENST00000549727 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
ATP2B1-206ENST00000549727 GNPATO15228 680 aa11.23□□□□□ -0.61
ATP2B1-206ENST00000549727 BLOC1S3Q6QNY0 202 aa11.23□□□□□ -0.61
ATP2B1-206ENST00000549727 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
ATP2B1-206ENST00000549727 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
ATP2B1-206ENST00000549727 ZPR1O75312 459 aa11.21□□□□□ -0.61
ATP2B1-206ENST00000549727 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
ATP2B1-206ENST00000549727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.2□□□□□ -0.62
ATP2B1-206ENST00000549727 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
ATP2B1-206ENST00000549727 PCDHB3Q9Y5E6 796 aa11.2□□□□□ -0.62
ATP2B1-206ENST00000549727 OATP04181 439 aa11.19□□□□□ -0.62
ATP2B1-206ENST00000549727 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
ATP2B1-206ENST00000549727 TLL1O43897 1013 aa11.18□□□□□ -0.62
ATP2B1-206ENST00000549727 CFHP08603 1231 aa11.18□□□□□ -0.62
ATP2B1-206ENST00000549727 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
ATP2B1-206ENST00000549727 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
ATP2B1-206ENST00000549727 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
ATP2B1-206ENST00000549727 SLC4A3P48751 1232 aa11.15□□□□□ -0.62
ATP2B1-206ENST00000549727 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
ATP2B1-206ENST00000549727 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
ATP2B1-206ENST00000549727 LCE2BO14633 110 aa11.12□□□□□ -0.63
ATP2B1-206ENST00000549727 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
ATP2B1-206ENST00000549727 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
ATP2B1-206ENST00000549727 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
ATP2B1-206ENST00000549727 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
ATP2B1-206ENST00000549727 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
ATP2B1-206ENST00000549727 RNF223E7ERA6 249 aa11.09□□□□□ -0.63
ATP2B1-206ENST00000549727 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
ATP2B1-206ENST00000549727 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
ATP2B1-206ENST00000549727 GFRA3O60609 400 aa11.07□□□□□ -0.64
ATP2B1-206ENST00000549727 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
ATP2B1-206ENST00000549727 S1PR4O95977 384 aa11.06□□□□□ -0.64
ATP2B1-206ENST00000549727 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
ATP2B1-206ENST00000549727 Q6ZNB5 142 aa11.05□□□□□ -0.64
ATP2B1-206ENST00000549727 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
ATP2B1-206ENST00000549727 FUT2Q10981 343 aa11.03□□□□□ -0.64
ATP2B1-206ENST00000549727 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
ATP2B1-206ENST00000549727 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.64
ATP2B1-206ENST00000549727 GGCXP38435 758 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 GCGRP47871 477 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 MORN1Q5T089 497 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 LIAT1Q6ZQX7 453 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 NR1I2O75469 434 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 ADH1BP00325 375 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
ATP2B1-206ENST00000549727 IRF6O14896 467 aa11□□□□□ -0.65
ATP2B1-206ENST00000549727 MAP2K5Q13163 448 aa11□□□□□ -0.65
ATP2B1-206ENST00000549727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
ATP2B1-206ENST00000549727 THAP11Q96EK4 314 aa10.99□□□□□ -0.65
ATP2B1-206ENST00000549727 SLC19A1P41440 591 aa10.98□□□□□ -0.65
ATP2B1-206ENST00000549727 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
ATP2B1-206ENST00000549727 ANKLE1Q8NAG6 615 aa10.98□□□□□ -0.65
ATP2B1-206ENST00000549727 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
ATP2B1-206ENST00000549727 SPSB2Q99619 263 aa10.97□□□□□ -0.65
ATP2B1-206ENST00000549727 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
ATP2B1-206ENST00000549727 ATP6V1AP38606 617 aa10.96□□□□□ -0.65
ATP2B1-206ENST00000549727 FAM160A2Q8N612 972 aaPredicted RBP10.96□□□□□ -0.65
ATP2B1-206ENST00000549727 NRG2O14511 850 aaPredicted RBP10.95□□□□□ -0.66
ATP2B1-206ENST00000549727 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
ATP2B1-206ENST00000549727 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
ATP2B1-206ENST00000549727 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
ATP2B1-206ENST00000549727 LAPTM4AQ15012 233 aa10.94□□□□□ -0.66
ATP2B1-206ENST00000549727 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
ATP2B1-206ENST00000549727 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
ATP2B1-206ENST00000549727 CD46P15529 392 aa10.93□□□□□ -0.66
ATP2B1-206ENST00000549727 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
ATP2B1-206ENST00000549727 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
ATP2B1-206ENST00000549727 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
ATP2B1-206ENST00000549727 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
ATP2B1-206ENST00000549727 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
ATP2B1-206ENST00000549727 BRICD5Q6PL45 260 aa10.91□□□□□ -0.66
ATP2B1-206ENST00000549727 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
ATP2B1-206ENST00000549727 HLA-CQ95604 372 aa10.91□□□□□ -0.66
ATP2B1-206ENST00000549727 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
ATP2B1-206ENST00000549727 LMOD2Q6P5Q4 547 aa10.88□□□□□ -0.67
ATP2B1-206ENST00000549727 GDF9O60383 454 aa10.87□□□□□ -0.67
ATP2B1-206ENST00000549727 FMNL1O95466 1100 aaPredicted RBP10.86□□□□□ -0.67
ATP2B1-206ENST00000549727 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
ATP2B1-206ENST00000549727 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
ATP2B1-206ENST00000549727 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
ATP2B1-206ENST00000549727 TNFRSF10AO00220 468 aa10.84□□□□□ -0.67
ATP2B1-206ENST00000549727 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
ATP2B1-206ENST00000549727 KDM4AO75164 1064 aa10.84□□□□□ -0.67
ATP2B1-206ENST00000549727 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
ATP2B1-206ENST00000549727 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
ATP2B1-206ENST00000549727 BARGINQ6ZT62 677 aa10.82□□□□□ -0.68
ATP2B1-206ENST00000549727 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
ATP2B1-206ENST00000549727 ZMYND10O75800 440 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 PRR20EP86478 221 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 PRR20CP86479 221 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 PRR20DP86480 221 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 PRR20BP86481 221 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 PRR20AP86496 221 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
ATP2B1-206ENST00000549727 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
ATP2B1-206ENST00000549727 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
ATP2B1-206ENST00000549727 HOXA2O43364 376 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms