RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
RAB5B-206ENST00000549505 NEXMIFQ5QGS0 1516 aa13.83□□□□□ -0.2
RAB5B-206ENST00000549505 MYOM1P52179 1685 aa13.82□□□□□ -0.2
RAB5B-206ENST00000549505 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
RAB5B-206ENST00000549505 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
RAB5B-206ENST00000549505 YEATS2Q9ULM3 1422 aa13.82□□□□□ -0.2
RAB5B-206ENST00000549505 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
RAB5B-206ENST00000549505 TMEM131LA2VDJ0 1609 aa13.81□□□□□ -0.2
RAB5B-206ENST00000549505 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
RAB5B-206ENST00000549505 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
RAB5B-206ENST00000549505 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
RAB5B-206ENST00000549505 PARD3Q8TEW0 1356 aa13.79□□□□□ -0.2
RAB5B-206ENST00000549505 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
RAB5B-206ENST00000549505 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
RAB5B-206ENST00000549505 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
RAB5B-206ENST00000549505 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.2
RAB5B-206ENST00000549505 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
RAB5B-206ENST00000549505 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
RAB5B-206ENST00000549505 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
RAB5B-206ENST00000549505 RALBP1Q15311 655 aa13.76□□□□□ -0.21
RAB5B-206ENST00000549505 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
RAB5B-206ENST00000549505 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
RAB5B-206ENST00000549505 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
RAB5B-206ENST00000549505 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
RAB5B-206ENST00000549505 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
RAB5B-206ENST00000549505 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
RAB5B-206ENST00000549505 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
RAB5B-206ENST00000549505 TMF1P82094 1093 aa13.73□□□□□ -0.21
RAB5B-206ENST00000549505 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
RAB5B-206ENST00000549505 C14orf93Q9H972 538 aaKnown RBP13.72□□□□□ -0.21
RAB5B-206ENST00000549505 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
RAB5B-206ENST00000549505 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
RAB5B-206ENST00000549505 CDCA8Q53HL2 280 aa13.71□□□□□ -0.21
RAB5B-206ENST00000549505 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.22
RAB5B-206ENST00000549505 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
RAB5B-206ENST00000549505 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
RAB5B-206ENST00000549505 ADGRF5Q8IZF2 1346 aa13.7□□□□□ -0.22
RAB5B-206ENST00000549505 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
RAB5B-206ENST00000549505 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
RAB5B-206ENST00000549505 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
RAB5B-206ENST00000549505 TSPOAP1O95153 1857 aa13.68□□□□□ -0.22
RAB5B-206ENST00000549505 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
RAB5B-206ENST00000549505 DLC1Q96QB1 1528 aa13.67□□□□□ -0.22
RAB5B-206ENST00000549505 MYO5BQ9ULV0 1848 aa13.66□□□□□ -0.22
RAB5B-206ENST00000549505 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
RAB5B-206ENST00000549505 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
RAB5B-206ENST00000549505 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
RAB5B-206ENST00000549505 GGT6Q6P531 493 aa13.64□□□□□ -0.23
RAB5B-206ENST00000549505 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
RAB5B-206ENST00000549505 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
RAB5B-206ENST00000549505 ERICH6BQ5W0A0 696 aa13.63□□□□□ -0.23
RAB5B-206ENST00000549505 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
RAB5B-206ENST00000549505 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
RAB5B-206ENST00000549505 A2ML1A8K2U0 1454 aa13.62□□□□□ -0.23
RAB5B-206ENST00000549505 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
RAB5B-206ENST00000549505 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
RAB5B-206ENST00000549505 CFAP70Q5T0N1 1121 aa13.62□□□□□ -0.23
RAB5B-206ENST00000549505 ALKQ9UM73 1620 aa13.61□□□□□ -0.23
RAB5B-206ENST00000549505 PTPRMP28827 1452 aa13.6□□□□□ -0.23
RAB5B-206ENST00000549505 TULP4Q9NRJ4 1543 aa13.6□□□□□ -0.23
RAB5B-206ENST00000549505 NRXN3Q9Y4C0 1643 aa13.6□□□□□ -0.23
RAB5B-206ENST00000549505 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-206ENST00000549505 IDI1Q13907 227 aa13.59□□□□□ -0.23
RAB5B-206ENST00000549505 NINLQ9Y2I6 1382 aa13.59□□□□□ -0.23
RAB5B-206ENST00000549505 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.23
RAB5B-206ENST00000549505 PANK3Q9H999 370 aa13.58□□□□□ -0.24
RAB5B-206ENST00000549505 CENPJQ9HC77 1338 aaPredicted RBP13.57□□□□□ -0.24
RAB5B-206ENST00000549505 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB5B-206ENST00000549505 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
RAB5B-206ENST00000549505 CFAP65Q6ZU64 1925 aaKnown RBP13.55□□□□□ -0.24
RAB5B-206ENST00000549505 MED14O60244 1454 aa13.55□□□□□ -0.24
RAB5B-206ENST00000549505 TECPR2O15040 1411 aa13.54□□□□□ -0.24
RAB5B-206ENST00000549505 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
RAB5B-206ENST00000549505 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
RAB5B-206ENST00000549505 NSD2O96028 1365 aa13.53□□□□□ -0.24
RAB5B-206ENST00000549505 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
RAB5B-206ENST00000549505 NLRP1Q9C000 1473 aa13.53□□□□□ -0.24
RAB5B-206ENST00000549505 CPS1P31327 1500 aa13.52□□□□□ -0.24
RAB5B-206ENST00000549505 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
RAB5B-206ENST00000549505 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
RAB5B-206ENST00000549505 ZMYM3Q14202 1370 aa13.51□□□□□ -0.25
RAB5B-206ENST00000549505 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
RAB5B-206ENST00000549505 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
RAB5B-206ENST00000549505 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
RAB5B-206ENST00000549505 SLIT1O75093 1534 aa13.49□□□□□ -0.25
RAB5B-206ENST00000549505 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
RAB5B-206ENST00000549505 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
RAB5B-206ENST00000549505 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
RAB5B-206ENST00000549505 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
RAB5B-206ENST00000549505 POLR3AO14802 1390 aaPredicted RBP13.48□□□□□ -0.25
RAB5B-206ENST00000549505 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
RAB5B-206ENST00000549505 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
RAB5B-206ENST00000549505 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
RAB5B-206ENST00000549505 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
RAB5B-206ENST00000549505 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
RAB5B-206ENST00000549505 CARD14Q9BXL6 1004 aa13.47□□□□□ -0.25
RAB5B-206ENST00000549505 C3P01024 1663 aa13.47□□□□□ -0.25
RAB5B-206ENST00000549505 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
RAB5B-206ENST00000549505 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
RAB5B-206ENST00000549505 FBXO31Q5XUX0 539 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms