RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
PPFIA2-216ENST00000549396 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
PPFIA2-216ENST00000549396 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 MINK1Q8N4C8 1332 aaPredicted RBP11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 AFAP1Q8N556 730 aa11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
PPFIA2-216ENST00000549396 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
PPFIA2-216ENST00000549396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.56
PPFIA2-216ENST00000549396 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
PPFIA2-216ENST00000549396 GNAI1P63096 354 aa11.57□□□□□ -0.56
PPFIA2-216ENST00000549396 PRKRIP1Q9H875 184 aaPredicted RBP11.57□□□□□ -0.56
PPFIA2-216ENST00000549396 CDK13Q14004 1512 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-216ENST00000549396 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
PPFIA2-216ENST00000549396 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
PPFIA2-216ENST00000549396 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
PPFIA2-216ENST00000549396 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 KIF16BQ96L93 1317 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 ERBINQ96RT1 1412 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 ZKSCAN2Q63HK3 967 aa11.55□□□□□ -0.56
PPFIA2-216ENST00000549396 FAM135AQ9P2D6 1515 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 FANCAO15360 1455 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 GOLGA6L4A6NEF3 574 aa11.54□□□□□ -0.56
PPFIA2-216ENST00000549396 RGS3P49796 1198 aa11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 CT47B1P0C2W7 299 aaPredicted RBP11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 NUTM2DQ5VT03 806 aaPredicted RBP11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 DUOX2Q9NRD8 1548 aa11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
PPFIA2-216ENST00000549396 PLCH2O75038 1416 aa11.52□□□□□ -0.57
PPFIA2-216ENST00000549396 DDX19BQ9UMR2 479 aa11.52□□□□□ -0.57
PPFIA2-216ENST00000549396 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 NAIPQ13075 1403 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 G3V3G9 751 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 ZNF608Q9ULD9 1512 aaPredicted RBP11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
PPFIA2-216ENST00000549396 ABCC5O15440 1437 aa11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 ZNF518AQ6AHZ1 1483 aa11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 SHANK2Q9UPX8 1470 aa11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 PLEKHO1Q53GL0 409 aaPredicted RBP11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 GBP4Q96PP9 640 aa11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 LRPPRCP42704 1394 aaKnown RBP11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 NCOA1Q15788 1441 aa11.5□□□□□ -0.57
PPFIA2-216ENST00000549396 SYAP1Q96A49 352 aaPredicted RBP11.49□□□□□ -0.57
PPFIA2-216ENST00000549396 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
PPFIA2-216ENST00000549396 KIF7Q2M1P5 1343 aa11.48□□□□□ -0.57
PPFIA2-216ENST00000549396 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
PPFIA2-216ENST00000549396 NSD2O96028 1365 aa11.48□□□□□ -0.57
PPFIA2-216ENST00000549396 GNL2Q13823 731 aaKnown RBP11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 NUP160Q12769 1436 aa11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 ABCC10Q5T3U5 1492 aa11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 KCNH5Q8NCM2 988 aa11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 NOL10Q9BSC4 688 aaKnown RBP11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
PPFIA2-216ENST00000549396 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-216ENST00000549396 CFAP74Q9C0B2 1584 aa11.46□□□□□ -0.58
PPFIA2-216ENST00000549396 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.58
PPFIA2-216ENST00000549396 NOP58Q9Y2X3 529 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-216ENST00000549396 DNAJC5BQ9UF47 199 aa11.45□□□□□ -0.58
PPFIA2-216ENST00000549396 ABCC2Q92887 1545 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 ST18O60284 1047 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 RIPK4P57078 832 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 NLRP6P59044 892 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 TPM4P67936 248 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 ASXL2Q76L83 1435 aa11.44□□□□□ -0.58
PPFIA2-216ENST00000549396 TATP17735 454 aaPredicted RBP11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 GPATCH8Q9UKJ3 1502 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 GLIPR1L2Q4G1C9 344 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 PRAM1Q96QH2 718 aa11.43□□□□□ -0.58
PPFIA2-216ENST00000549396 KDM5BQ9UGL1 1544 aa11.42□□□□□ -0.58
PPFIA2-216ENST00000549396 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-216ENST00000549396 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
PPFIA2-216ENST00000549396 ATP10BO94823 1461 aa11.41□□□□□ -0.58
PPFIA2-216ENST00000549396 C9orf78Q9NZ63 289 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms