RNA–Protein interactions for RNA: ENST00000549355.1

PTPRQ-204, Transcript of protein tyrosine phosphatase, receptor type Q, humanhuman

TSL 4

Gene PTPRQ, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQ-204ENST00000549355 RNF40O75150 1001 aa11.47□□□□□ -0.57
PTPRQ-204ENST00000549355 AVPP01185 164 aa11.46□□□□□ -0.57
PTPRQ-204ENST00000549355 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
PTPRQ-204ENST00000549355 NBR1Q14596 966 aa11.45□□□□□ -0.58
PTPRQ-204ENST00000549355 PKD2L1Q9P0L9 805 aa11.45□□□□□ -0.58
PTPRQ-204ENST00000549355 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
PTPRQ-204ENST00000549355 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
PTPRQ-204ENST00000549355 TLL1O43897 1013 aa11.42□□□□□ -0.58
PTPRQ-204ENST00000549355 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
PTPRQ-204ENST00000549355 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PTPRQ-204ENST00000549355 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
PTPRQ-204ENST00000549355 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
PTPRQ-204ENST00000549355 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
PTPRQ-204ENST00000549355 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
PTPRQ-204ENST00000549355 LORP23490 312 aaPredicted RBP11.4□□□□□ -0.58
PTPRQ-204ENST00000549355 S1PR4O95977 384 aa11.39□□□□□ -0.59
PTPRQ-204ENST00000549355 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
PTPRQ-204ENST00000549355 SUZ12Q15022 739 aaKnown RBP11.39□□□□□ -0.59
PTPRQ-204ENST00000549355 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
PTPRQ-204ENST00000549355 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
PTPRQ-204ENST00000549355 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
PTPRQ-204ENST00000549355 TTC13Q8NBP0 860 aa11.36□□□□□ -0.59
PTPRQ-204ENST00000549355 TOR4AQ9NXH8 423 aa11.36□□□□□ -0.59
PTPRQ-204ENST00000549355 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
PTPRQ-204ENST00000549355 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
PTPRQ-204ENST00000549355 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
PTPRQ-204ENST00000549355 PDIA6Q15084 440 aa11.33□□□□□ -0.6
PTPRQ-204ENST00000549355 AXIN1O15169 862 aa11.32□□□□□ -0.6
PTPRQ-204ENST00000549355 CTC1Q2NKJ3 1217 aa11.31□□□□□ -0.6
PTPRQ-204ENST00000549355 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
PTPRQ-204ENST00000549355 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
PTPRQ-204ENST00000549355 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
PTPRQ-204ENST00000549355 FOXC1Q12948 553 aa11.27□□□□□ -0.61
PTPRQ-204ENST00000549355 EYA1Q99502 592 aa11.26□□□□□ -0.61
PTPRQ-204ENST00000549355 ADH1BP00325 375 aa11.24□□□□□ -0.61
PTPRQ-204ENST00000549355 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
PTPRQ-204ENST00000549355 FAM181BA6NEQ2 426 aa11.2□□□□□ -0.62
PTPRQ-204ENST00000549355 SPDYE16A6NNV3 312 aaPredicted RBP11.2□□□□□ -0.62
PTPRQ-204ENST00000549355 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
PTPRQ-204ENST00000549355 ATP13A2Q9NQ11 1180 aa11.2□□□□□ -0.62
PTPRQ-204ENST00000549355 OSBPP22059 807 aa11.19□□□□□ -0.62
PTPRQ-204ENST00000549355 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
PTPRQ-204ENST00000549355 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
PTPRQ-204ENST00000549355 SLC6A16Q9GZN6 736 aa11.18□□□□□ -0.62
PTPRQ-204ENST00000549355 RPIAP49247 311 aa11.16□□□□□ -0.62
PTPRQ-204ENST00000549355 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
PTPRQ-204ENST00000549355 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
PTPRQ-204ENST00000549355 GMPRP36959 345 aa11.13□□□□□ -0.63
PTPRQ-204ENST00000549355 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
PTPRQ-204ENST00000549355 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
PTPRQ-204ENST00000549355 SMPD1P17405 629 aa11.1□□□□□ -0.63
PTPRQ-204ENST00000549355 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
PTPRQ-204ENST00000549355 GSK3AP49840 483 aa11.07□□□□□ -0.64
PTPRQ-204ENST00000549355 NR1I2O75469 434 aa11.06□□□□□ -0.64
PTPRQ-204ENST00000549355 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
PTPRQ-204ENST00000549355 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
PTPRQ-204ENST00000549355 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
PTPRQ-204ENST00000549355 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
PTPRQ-204ENST00000549355 CFHP08603 1231 aa11.04□□□□□ -0.64
PTPRQ-204ENST00000549355 SLC10A3P09131 477 aa11.04□□□□□ -0.64
PTPRQ-204ENST00000549355 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
PTPRQ-204ENST00000549355 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
PTPRQ-204ENST00000549355 DNAJB2P25686 324 aa11.02□□□□□ -0.65
PTPRQ-204ENST00000549355 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
PTPRQ-204ENST00000549355 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
PTPRQ-204ENST00000549355 SPSB2Q99619 263 aa11.01□□□□□ -0.65
PTPRQ-204ENST00000549355 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
PTPRQ-204ENST00000549355 FCF1Q9Y324 198 aaKnown RBP10.99□□□□□ -0.65
PTPRQ-204ENST00000549355 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
PTPRQ-204ENST00000549355 J3QL48 77 aa10.97□□□□□ -0.65
PTPRQ-204ENST00000549355 KCNMA1Q12791 1236 aa10.97□□□□□ -0.65
PTPRQ-204ENST00000549355 KCTD17Q8N5Z5 321 aa10.97□□□□□ -0.65
PTPRQ-204ENST00000549355 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
PTPRQ-204ENST00000549355 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
PTPRQ-204ENST00000549355 WNT7AO00755 349 aa10.96□□□□□ -0.65
PTPRQ-204ENST00000549355 IRF7Q92985 503 aa10.96□□□□□ -0.65
PTPRQ-204ENST00000549355 H3BM21 787 aa10.95□□□□□ -0.66
PTPRQ-204ENST00000549355 HPS1Q92902 700 aa10.95□□□□□ -0.66
PTPRQ-204ENST00000549355 THAP11Q96EK4 314 aa10.94□□□□□ -0.66
PTPRQ-204ENST00000549355 PUS10Q3MIT2 529 aaKnown RBP10.93□□□□□ -0.66
PTPRQ-204ENST00000549355 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
PTPRQ-204ENST00000549355 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
PTPRQ-204ENST00000549355 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
PTPRQ-204ENST00000549355 VEGFBP49765 207 aa10.89□□□□□ -0.67
PTPRQ-204ENST00000549355 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
PTPRQ-204ENST00000549355 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
PTPRQ-204ENST00000549355 E2F4Q16254 413 aa10.84□□□□□ -0.67
PTPRQ-204ENST00000549355 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
PTPRQ-204ENST00000549355 MORN1Q5T089 497 aa10.82□□□□□ -0.68
PTPRQ-204ENST00000549355 TRIM46Q7Z4K8 759 aa10.82□□□□□ -0.68
PTPRQ-204ENST00000549355 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
PTPRQ-204ENST00000549355 KRTAP4-8Q9BYQ9 185 aa10.81□□□□□ -0.68
PTPRQ-204ENST00000549355 TRIM32Q13049 653 aa10.8□□□□□ -0.68
PTPRQ-204ENST00000549355 PTGDRQ13258 359 aa10.8□□□□□ -0.68
PTPRQ-204ENST00000549355 XP32Q5T750 250 aa10.79□□□□□ -0.68
PTPRQ-204ENST00000549355 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.69
PTPRQ-204ENST00000549355 VSIG8P0DPA2 414 aa10.77□□□□□ -0.69
PTPRQ-204ENST00000549355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
PTPRQ-204ENST00000549355 TMEM151AQ8N4L1 468 aa10.76□□□□□ -0.69
PTPRQ-204ENST00000549355 BMP1P13497 986 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms