RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
LINC00661-204ENST00000549354 KIAA1210Q9ULL0 1709 aa15.05■□□□□ -0
LINC00661-204ENST00000549354 IFT172Q9UG01 1749 aa15.04■□□□□ -0
LINC00661-204ENST00000549354 KIF1BO60333 1816 aa15.04■□□□□ -0
LINC00661-204ENST00000549354 MYOM2P54296 1465 aa15.04■□□□□ -0
LINC00661-204ENST00000549354 ADGRB3O60242 1522 aa15.03■□□□□ -0
LINC00661-204ENST00000549354 NOS1P29475 1434 aa15.02■□□□□ -0
LINC00661-204ENST00000549354 PRKRIP1Q9H875 184 aaPredicted RBP15.02■□□□□ -0
LINC00661-204ENST00000549354 AGLP35573 1532 aa15.02■□□□□ -0
LINC00661-204ENST00000549354 PPP4R2Q9NY27 417 aa15.02□□□□□ -0.01
LINC00661-204ENST00000549354 NRXN1Q9ULB1 1477 aa15.02□□□□□ -0.01
LINC00661-204ENST00000549354 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
LINC00661-204ENST00000549354 UGGT1Q9NYU2 1555 aa15.01□□□□□ -0.01
LINC00661-204ENST00000549354 PIK3C2BO00750 1634 aa15.01□□□□□ -0.01
LINC00661-204ENST00000549354 TSPOAP1O95153 1857 aa15□□□□□ -0.01
LINC00661-204ENST00000549354 ST20-MTHFSA0A0A6YYL1 179 aa15□□□□□ -0.01
LINC00661-204ENST00000549354 IQGAP1P46940 1657 aa15□□□□□ -0.01
LINC00661-204ENST00000549354 MROH2AA6NES4 1674 aa15□□□□□ -0.01
LINC00661-204ENST00000549354 SIGLEC1Q9BZZ2 1709 aa14.99□□□□□ -0.01
LINC00661-204ENST00000549354 GGT6Q6P531 493 aa14.99□□□□□ -0.01
LINC00661-204ENST00000549354 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
LINC00661-204ENST00000549354 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
LINC00661-204ENST00000549354 TMC1Q8TDI8 760 aa14.97□□□□□ -0.01
LINC00661-204ENST00000549354 SYNMO15061 1565 aa14.97□□□□□ -0.01
LINC00661-204ENST00000549354 TESK2Q96S53 571 aa14.96□□□□□ -0.01
LINC00661-204ENST00000549354 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
LINC00661-204ENST00000549354 CCDC136Q96JN2 1154 aa14.95□□□□□ -0.02
LINC00661-204ENST00000549354 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
LINC00661-204ENST00000549354 PPLO60437 1756 aa14.95□□□□□ -0.02
LINC00661-204ENST00000549354 RPGRIP1LQ68CZ1 1315 aa14.94□□□□□ -0.02
LINC00661-204ENST00000549354 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
LINC00661-204ENST00000549354 SCAF11Q99590 1463 aaKnown RBP14.94□□□□□ -0.02
LINC00661-204ENST00000549354 ARHGEF40Q8TER5 1519 aa14.93□□□□□ -0.02
LINC00661-204ENST00000549354 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
LINC00661-204ENST00000549354 SETBP1Q9Y6X0 1596 aa14.92□□□□□ -0.02
LINC00661-204ENST00000549354 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
LINC00661-204ENST00000549354 PREX1Q8TCU6 1659 aa14.91□□□□□ -0.02
LINC00661-204ENST00000549354 ADGRF5Q8IZF2 1346 aa14.89□□□□□ -0.03
LINC00661-204ENST00000549354 PIK3C2GO75747 1445 aa14.89□□□□□ -0.03
LINC00661-204ENST00000549354 DEKP35659 375 aaKnown RBP14.89□□□□□ -0.03
LINC00661-204ENST00000549354 PLIN1O60240 522 aa14.88□□□□□ -0.03
LINC00661-204ENST00000549354 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
LINC00661-204ENST00000549354 MYO3AQ8NEV4 1616 aa14.88□□□□□ -0.03
LINC00661-204ENST00000549354 KTN1Q86UP2 1357 aaKnown RBP14.88□□□□□ -0.03
LINC00661-204ENST00000549354 DISP3Q9P2K9 1392 aa14.88□□□□□ -0.03
LINC00661-204ENST00000549354 ZFYVE9O95405 1425 aa14.88□□□□□ -0.03
LINC00661-204ENST00000549354 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
LINC00661-204ENST00000549354 NEXMIFQ5QGS0 1516 aa14.87□□□□□ -0.03
LINC00661-204ENST00000549354 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
LINC00661-204ENST00000549354 TMEM131LA2VDJ0 1609 aa14.86□□□□□ -0.03
LINC00661-204ENST00000549354 ERVK-7P63135 1459 aa14.85□□□□□ -0.03
LINC00661-204ENST00000549354 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
LINC00661-204ENST00000549354 TMF1P82094 1093 aa14.85□□□□□ -0.03
LINC00661-204ENST00000549354 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
LINC00661-204ENST00000549354 C14orf93Q9H972 538 aaKnown RBP14.84□□□□□ -0.03
LINC00661-204ENST00000549354 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
LINC00661-204ENST00000549354 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
LINC00661-204ENST00000549354 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
LINC00661-204ENST00000549354 CFAP70Q5T0N1 1121 aa14.84□□□□□ -0.03
LINC00661-204ENST00000549354 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
LINC00661-204ENST00000549354 SBNO2Q9Y2G9 1366 aa14.83□□□□□ -0.04
LINC00661-204ENST00000549354 PER1O15534 1290 aaPredicted RBP14.83□□□□□ -0.04
LINC00661-204ENST00000549354 IDI1Q13907 227 aa14.83□□□□□ -0.04
LINC00661-204ENST00000549354 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
LINC00661-204ENST00000549354 CLTCQ00610 1675 aaKnown RBP14.83□□□□□ -0.04
LINC00661-204ENST00000549354 VGFO15240 615 aaPredicted RBP14.79□□□□□ -0.04
LINC00661-204ENST00000549354 RALBP1Q15311 655 aa14.79□□□□□ -0.04
LINC00661-204ENST00000549354 CDCA8Q53HL2 280 aa14.79□□□□□ -0.04
LINC00661-204ENST00000549354 CDCA7LQ96GN5 454 aa14.79□□□□□ -0.04
LINC00661-204ENST00000549354 MYO5BQ9ULV0 1848 aa14.79□□□□□ -0.04
LINC00661-204ENST00000549354 PARD3Q8TEW0 1356 aa14.78□□□□□ -0.04
LINC00661-204ENST00000549354 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
LINC00661-204ENST00000549354 MYOM1P52179 1685 aa14.78□□□□□ -0.04
LINC00661-204ENST00000549354 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.04
LINC00661-204ENST00000549354 NUDCQ9Y266 331 aa14.77□□□□□ -0.04
LINC00661-204ENST00000549354 EXOC6Q8TAG9 804 aa14.77□□□□□ -0.05
LINC00661-204ENST00000549354 ERICH6BQ5W0A0 696 aa14.76□□□□□ -0.05
LINC00661-204ENST00000549354 KDM5AP29375 1690 aaKnown RBP14.76□□□□□ -0.05
LINC00661-204ENST00000549354 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
LINC00661-204ENST00000549354 BRD4O60885 1362 aaPredicted RBP14.75□□□□□ -0.05
LINC00661-204ENST00000549354 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
LINC00661-204ENST00000549354 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
LINC00661-204ENST00000549354 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
LINC00661-204ENST00000549354 PANK3Q9H999 370 aa14.74□□□□□ -0.05
LINC00661-204ENST00000549354 A2ML1A8K2U0 1454 aa14.73□□□□□ -0.05
LINC00661-204ENST00000549354 RTL5Q5HYW3 569 aaPredicted RBP14.72□□□□□ -0.05
LINC00661-204ENST00000549354 ASXL1Q8IXJ9 1541 aa14.72□□□□□ -0.05
LINC00661-204ENST00000549354 ARHGEF28Q8N1W1 1705 aaKnown RBP14.72□□□□□ -0.05
LINC00661-204ENST00000549354 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
LINC00661-204ENST00000549354 NPC1L1Q9UHC9 1359 aa14.72□□□□□ -0.05
LINC00661-204ENST00000549354 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
LINC00661-204ENST00000549354 ZMYM3Q14202 1370 aa14.72□□□□□ -0.05
LINC00661-204ENST00000549354 CENPJQ9HC77 1338 aaPredicted RBP14.71□□□□□ -0.05
LINC00661-204ENST00000549354 PUS7Q96PZ0 661 aaKnown RBP14.71□□□□□ -0.05
LINC00661-204ENST00000549354 LRPPRCP42704 1394 aaKnown RBP14.7□□□□□ -0.06
LINC00661-204ENST00000549354 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
LINC00661-204ENST00000549354 NEUROD2Q15784 382 aa14.69□□□□□ -0.06
LINC00661-204ENST00000549354 IPO9Q96P70 1041 aaKnown RBP14.69□□□□□ -0.06
LINC00661-204ENST00000549354 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
LINC00661-204ENST00000549354 INSRP06213 1382 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms