RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
DDX54-206ENST00000549271 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
DDX54-206ENST00000549271 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
DDX54-206ENST00000549271 CROCC2H7BZ55 1655 aa19.31■□□□□ 0.68
DDX54-206ENST00000549271 RXRBP28702 533 aa19.31■□□□□ 0.68
DDX54-206ENST00000549271 VPS8Q8N3P4 1428 aa19.31■□□□□ 0.68
DDX54-206ENST00000549271 NOS1P29475 1434 aa19.3■□□□□ 0.68
DDX54-206ENST00000549271 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
DDX54-206ENST00000549271 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
DDX54-206ENST00000549271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■■□□ 14.6
DDX54-206ENST00000549271 KANK1Q14678 1352 aa19.28■□□□□ 0.68
DDX54-206ENST00000549271 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.28■□□□□ 0.68
DDX54-206ENST00000549271 MYO5BQ9ULV0 1848 aa19.28■□□□□ 0.68
DDX54-206ENST00000549271 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
DDX54-206ENST00000549271 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
DDX54-206ENST00000549271 RRP7BPQ9NSQ0 103 aa19.25■□□□□ 0.67
DDX54-206ENST00000549271 ABCC5O15440 1437 aa19.25■□□□□ 0.67
DDX54-206ENST00000549271 BCANQ96GW7 911 aa19.24■□□□□ 0.67
DDX54-206ENST00000549271 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
DDX54-206ENST00000549271 CADPS2Q86UW7 1296 aa19.21■□□□□ 0.67
DDX54-206ENST00000549271 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
DDX54-206ENST00000549271 RGS12O14924 1447 aa19.2■□□□□ 0.66
DDX54-206ENST00000549271 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
DDX54-206ENST00000549271 AFF2P51816 1311 aa19.2■□□□□ 0.66
DDX54-206ENST00000549271 C19orf44Q9H6X5 657 aa19.19■□□□□ 0.66
DDX54-206ENST00000549271 TMEM131LA2VDJ0 1609 aa19.18■□□□□ 0.66
DDX54-206ENST00000549271 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
DDX54-206ENST00000549271 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
DDX54-206ENST00000549271 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
DDX54-206ENST00000549271 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
DDX54-206ENST00000549271 BRINP3Q76B58 766 aa19.17■□□□□ 0.66
DDX54-206ENST00000549271 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
DDX54-206ENST00000549271 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
DDX54-206ENST00000549271 DAPK1P53355 1430 aa19.17■□□□□ 0.66
DDX54-206ENST00000549271 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
DDX54-206ENST00000549271 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
DDX54-206ENST00000549271 ATF3P18847 181 aa19.16■□□□□ 0.66
DDX54-206ENST00000549271 ADAMTS13Q76LX8 1427 aa19.16■□□□□ 0.66
DDX54-206ENST00000549271 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
DDX54-206ENST00000549271 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
DDX54-206ENST00000549271 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
DDX54-206ENST00000549271 PPP1R15AO75807 674 aaPredicted RBP19.14■□□□□ 0.65
DDX54-206ENST00000549271 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
DDX54-206ENST00000549271 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
DDX54-206ENST00000549271 ASXL1Q8IXJ9 1541 aa19.14■□□□□ 0.65
DDX54-206ENST00000549271 DCCP43146 1447 aa19.12■□□□□ 0.65
DDX54-206ENST00000549271 ANKRD30AQ9BXX3 1397 aa19.11■□□□□ 0.65
DDX54-206ENST00000549271 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
DDX54-206ENST00000549271 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX54-206ENST00000549271 EP400Q96L91 3159 aa19.09■□□□□ 0.65
DDX54-206ENST00000549271 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.64
DDX54-206ENST00000549271 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
DDX54-206ENST00000549271 TRPM2O94759 1503 aa19.08■□□□□ 0.64
DDX54-206ENST00000549271 PTPRUQ92729 1446 aa19.08■□□□□ 0.64
DDX54-206ENST00000549271 LRRC59Q96AG4 307 aaKnown RBP19.07■□□□□ 0.64
DDX54-206ENST00000549271 MST1RQ04912 1400 aa19.07■□□□□ 0.64
DDX54-206ENST00000549271 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
DDX54-206ENST00000549271 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
DDX54-206ENST00000549271 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
DDX54-206ENST00000549271 CHIC2Q9UKJ5 165 aa19.05■□□□□ 0.64
DDX54-206ENST00000549271 AMOTL2Q9Y2J4 779 aa19.05■□□□□ 0.64
DDX54-206ENST00000549271 SETBP1Q9Y6X0 1596 aa19.05■□□□□ 0.64
DDX54-206ENST00000549271 UNC13BO14795 1591 aa19.04■□□□□ 0.64
DDX54-206ENST00000549271 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
DDX54-206ENST00000549271 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
DDX54-206ENST00000549271 ZRANB1Q9UGI0 708 aa19.03■□□□□ 0.64
DDX54-206ENST00000549271 APLP2Q06481 763 aa19.01■□□□□ 0.63
DDX54-206ENST00000549271 FOXD1Q16676 465 aa19.01■□□□□ 0.63
DDX54-206ENST00000549271 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
DDX54-206ENST00000549271 E9PCH4 1651 aa18.99■□□□□ 0.63
DDX54-206ENST00000549271 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
DDX54-206ENST00000549271 LAMC1P11047 1609 aa18.99■□□□□ 0.63
DDX54-206ENST00000549271 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
DDX54-206ENST00000549271 ANKRD50Q9ULJ7 1429 aa18.97■□□□□ 0.63
DDX54-206ENST00000549271 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
DDX54-206ENST00000549271 NALCNQ8IZF0 1738 aa18.96■□□□□ 0.63
DDX54-206ENST00000549271 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
DDX54-206ENST00000549271 CCDC125Q86Z20 511 aa18.94■□□□□ 0.62
DDX54-206ENST00000549271 USP21Q9UK80 565 aa18.94■□□□□ 0.62
DDX54-206ENST00000549271 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
DDX54-206ENST00000549271 ATRNO75882 1429 aa18.93■□□□□ 0.62
DDX54-206ENST00000549271 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
DDX54-206ENST00000549271 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
DDX54-206ENST00000549271 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
DDX54-206ENST00000549271 COL22A1Q8NFW1 1626 aaPredicted RBP18.9■□□□□ 0.62
DDX54-206ENST00000549271 METP08581 1390 aa18.9■□□□□ 0.62
DDX54-206ENST00000549271 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
DDX54-206ENST00000549271 SOS2Q07890 1332 aaPredicted RBP18.89■□□□□ 0.61
DDX54-206ENST00000549271 MARF1Q9Y4F3 1742 aaKnown RBP18.86■□□□□ 0.61
DDX54-206ENST00000549271 LRP5O75197 1615 aa18.86■□□□□ 0.61
DDX54-206ENST00000549271 BCL9LQ86UU0 1499 aa18.85■□□□□ 0.61
DDX54-206ENST00000549271 MYOM2P54296 1465 aa18.83■□□□□ 0.6
DDX54-206ENST00000549271 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.81■□□□□ 0.6
DDX54-206ENST00000549271 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
DDX54-206ENST00000549271 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
DDX54-206ENST00000549271 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
DDX54-206ENST00000549271 SPHKAPQ2M3C7 1700 aa18.79■□□□□ 0.6
DDX54-206ENST00000549271 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
DDX54-206ENST00000549271 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.6
DDX54-206ENST00000549271 GLI3P10071 1580 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms