RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 TOR4AQ9NXH8 423 aa5.45□□□□□ -1.54
DEPDC4-206ENST00000549100 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-206ENST00000549100 S1PR4O95977 384 aa5.43□□□□□ -1.54
DEPDC4-206ENST00000549100 KCNMA1Q12791 1236 aa5.43□□□□□ -1.54
DEPDC4-206ENST00000549100 ATP13A2Q9NQ11 1180 aa5.43□□□□□ -1.54
DEPDC4-206ENST00000549100 CTC1Q2NKJ3 1217 aa5.42□□□□□ -1.54
DEPDC4-206ENST00000549100 TRIM47Q96LD4 638 aa5.42□□□□□ -1.54
DEPDC4-206ENST00000549100 SLC24A1O60721 1099 aa5.41□□□□□ -1.54
DEPDC4-206ENST00000549100 TSR1Q2NL82 804 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-206ENST00000549100 BLOC1S3Q6QNY0 202 aa5.41□□□□□ -1.54
DEPDC4-206ENST00000549100 RGL2O15211 777 aa5.4□□□□□ -1.54
DEPDC4-206ENST00000549100 VEGFBP49765 207 aa5.4□□□□□ -1.54
DEPDC4-206ENST00000549100 TATDN2Q93075 761 aa5.4□□□□□ -1.54
DEPDC4-206ENST00000549100 PSMG3-AS1Q96PY0 264 aa5.4□□□□□ -1.54
DEPDC4-206ENST00000549100 ERBB4Q15303 1308 aa5.4□□□□□ -1.55
DEPDC4-206ENST00000549100 EPAS1Q99814 870 aa5.39□□□□□ -1.55
DEPDC4-206ENST00000549100 SLC16A10Q8TF71 515 aa5.38□□□□□ -1.55
DEPDC4-206ENST00000549100 CDCA7LQ96GN5 454 aa5.38□□□□□ -1.55
DEPDC4-206ENST00000549100 PNMA3Q9UL41 463 aa5.38□□□□□ -1.55
DEPDC4-206ENST00000549100 PKD2Q13563 968 aa5.37□□□□□ -1.55
DEPDC4-206ENST00000549100 TMEM151AQ8N4L1 468 aa5.37□□□□□ -1.55
DEPDC4-206ENST00000549100 NXF1Q9UBU9 619 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-206ENST00000549100 PDE4AP27815 886 aa5.36□□□□□ -1.55
DEPDC4-206ENST00000549100 LMOD2Q6P5Q4 547 aa5.36□□□□□ -1.55
DEPDC4-206ENST00000549100 GDF11O95390 407 aa5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 RASSF7Q02833 373 aa5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 CYP4X1Q8N118 509 aa5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 IRF7Q92985 503 aa5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 LARP6Q9BRS8 491 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 PCDHB3Q9Y5E6 796 aa5.35□□□□□ -1.55
DEPDC4-206ENST00000549100 PRSS12P56730 875 aa5.34□□□□□ -1.55
DEPDC4-206ENST00000549100 SWT1Q5T5J6 900 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-206ENST00000549100 DDX12PQ92771 950 aa5.34□□□□□ -1.55
DEPDC4-206ENST00000549100 SMPD1P17405 629 aa5.33□□□□□ -1.56
DEPDC4-206ENST00000549100 NUDT18Q6ZVK8 323 aa5.33□□□□□ -1.56
DEPDC4-206ENST00000549100 SENP2Q9HC62 589 aa5.33□□□□□ -1.56
DEPDC4-206ENST00000549100 H3BM21 787 aa5.32□□□□□ -1.56
DEPDC4-206ENST00000549100 ECM2O94769 699 aaPredicted RBP5.32□□□□□ -1.56
DEPDC4-206ENST00000549100 DDX27Q96GQ7 796 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-206ENST00000549100 HDGFP51858 240 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-206ENST00000549100 EN1Q05925 392 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-206ENST00000549100 MFSD10Q14728 455 aa5.3□□□□□ -1.56
DEPDC4-206ENST00000549100 NBPF26B4DH59 902 aa5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 MAP3K7O43318 606 aa5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 PRIM1P49642 420 aaKnown RBP5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 GPAT2Q6NUI2 795 aa5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
DEPDC4-206ENST00000549100 TTC24A2A3L6 582 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-206ENST00000549100 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
DEPDC4-206ENST00000549100 KIFC2Q96AC6 838 aa5.28□□□□□ -1.56
DEPDC4-206ENST00000549100 J3QL48 77 aa5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 ADH1BP00325 375 aa5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 NKX1-1Q15270 411 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 SLF2Q8IX21 1173 aa5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 HPS1Q92902 700 aa5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 SLC6A16Q9GZN6 736 aa5.27□□□□□ -1.57
DEPDC4-206ENST00000549100 DCAF8L2P0C7V8 631 aa5.26□□□□□ -1.57
DEPDC4-206ENST00000549100 NPAS3Q8IXF0 933 aa5.26□□□□□ -1.57
DEPDC4-206ENST00000549100 DPYSL4O14531 572 aa5.25□□□□□ -1.57
DEPDC4-206ENST00000549100 RPIAP49247 311 aa5.25□□□□□ -1.57
DEPDC4-206ENST00000549100 NBR1Q14596 966 aa5.25□□□□□ -1.57
DEPDC4-206ENST00000549100 NECTIN2Q92692 538 aa5.25□□□□□ -1.57
DEPDC4-206ENST00000549100 CD2BP2O95400 341 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-206ENST00000549100 PLCB2Q00722 1185 aa5.23□□□□□ -1.57
DEPDC4-206ENST00000549100 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
DEPDC4-206ENST00000549100 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
DEPDC4-206ENST00000549100 ADAM23O75077 832 aa5.22□□□□□ -1.57
DEPDC4-206ENST00000549100 TRIM46Q7Z4K8 759 aa5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 HS6ST3Q8IZP7 471 aa5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 SNIP1Q8TAD8 396 aaKnown RBP5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 PRR14Q9BWN1 585 aa5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 DNAJC5Q9H3Z4 198 aa5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 CDHR5Q9HBB8 845 aa5.21□□□□□ -1.58
DEPDC4-206ENST00000549100 BMP1P13497 986 aa5.2□□□□□ -1.58
DEPDC4-206ENST00000549100 ADAMTS8Q9UP79 889 aa5.2□□□□□ -1.58
DEPDC4-206ENST00000549100 ACTN4O43707 911 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-206ENST00000549100 FCF1Q9Y324 198 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-206ENST00000549100 IGHA1P01876 353 aa5.18□□□□□ -1.58
DEPDC4-206ENST00000549100 SCUBE3Q8IX30 993 aa5.18□□□□□ -1.58
DEPDC4-206ENST00000549100 TTC13Q8NBP0 860 aa5.18□□□□□ -1.58
DEPDC4-206ENST00000549100 MRGPRX2Q96LB1 330 aa5.18□□□□□ -1.58
DEPDC4-206ENST00000549100 EYA1Q99502 592 aa5.18□□□□□ -1.58
DEPDC4-206ENST00000549100 WNT7AO00755 349 aa5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 VSIG8P0DPA2 414 aa5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 CAMK2BQ13554 666 aa5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 Q8N3U1 123 aa5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 CERKQ8TCT0 537 aa5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 DNMT3AQ9Y6K1 912 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-206ENST00000549100 IRS1P35568 1242 aa5.16□□□□□ -1.58
DEPDC4-206ENST00000549100 PADI6Q6TGC4 694 aa5.15□□□□□ -1.59
DEPDC4-206ENST00000549100 SPSB2Q99619 263 aa5.15□□□□□ -1.59
DEPDC4-206ENST00000549100 NR1I2O75469 434 aa5.14□□□□□ -1.59
DEPDC4-206ENST00000549100 HAP1P54257 671 aaPredicted RBP5.14□□□□□ -1.59
DEPDC4-206ENST00000549100 CADPS2Q86UW7 1296 aa5.14□□□□□ -1.59
DEPDC4-206ENST00000549100 CFHP08603 1231 aa5.13□□□□□ -1.59
DEPDC4-206ENST00000549100 KRT76Q01546 638 aa5.13□□□□□ -1.59
DEPDC4-206ENST00000549100 PUS10Q3MIT2 529 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-206ENST00000549100 BBXQ8WY36 941 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-206ENST00000549100 SOBPA7XYQ1 873 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms