RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 OATP04181 439 aa12.79□□□□□ -0.36
CNOT2-215ENST00000548863 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
CNOT2-215ENST00000548863 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
CNOT2-215ENST00000548863 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
CNOT2-215ENST00000548863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
CNOT2-215ENST00000548863 COPS2P61201 443 aa12.78□□□□□ -0.36
CNOT2-215ENST00000548863 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
CNOT2-215ENST00000548863 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
CNOT2-215ENST00000548863 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
CNOT2-215ENST00000548863 GGCXP38435 758 aa12.76□□□□□ -0.37
CNOT2-215ENST00000548863 FAM161AQ3B820 660 aa12.76□□□□□ -0.37
CNOT2-215ENST00000548863 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
CNOT2-215ENST00000548863 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
CNOT2-215ENST00000548863 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
CNOT2-215ENST00000548863 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
CNOT2-215ENST00000548863 Q6ZNB5 142 aa12.72□□□□□ -0.37
CNOT2-215ENST00000548863 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
CNOT2-215ENST00000548863 SLC10A3P09131 477 aa12.71□□□□□ -0.37
CNOT2-215ENST00000548863 GNPATO15228 680 aa12.7□□□□□ -0.38
CNOT2-215ENST00000548863 GPR37O15354 613 aa12.69□□□□□ -0.38
CNOT2-215ENST00000548863 GFRA3O60609 400 aa12.69□□□□□ -0.38
CNOT2-215ENST00000548863 CFHP08603 1231 aa12.69□□□□□ -0.38
CNOT2-215ENST00000548863 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
CNOT2-215ENST00000548863 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
CNOT2-215ENST00000548863 FECHP22830 423 aa12.65□□□□□ -0.38
CNOT2-215ENST00000548863 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
CNOT2-215ENST00000548863 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
CNOT2-215ENST00000548863 NR1I2O75469 434 aa12.63□□□□□ -0.39
CNOT2-215ENST00000548863 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
CNOT2-215ENST00000548863 DAXXQ9UER7 740 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-215ENST00000548863 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
CNOT2-215ENST00000548863 TLL1O43897 1013 aa12.6□□□□□ -0.39
CNOT2-215ENST00000548863 LCE2BO14633 110 aa12.59□□□□□ -0.39
CNOT2-215ENST00000548863 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
CNOT2-215ENST00000548863 ADH1BP00325 375 aa12.58□□□□□ -0.4
CNOT2-215ENST00000548863 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
CNOT2-215ENST00000548863 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
CNOT2-215ENST00000548863 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
CNOT2-215ENST00000548863 SLC19A1P41440 591 aa12.56□□□□□ -0.4
CNOT2-215ENST00000548863 S1PR4O95977 384 aa12.55□□□□□ -0.4
CNOT2-215ENST00000548863 GPIHBP1Q8IV16 184 aa12.55□□□□□ -0.4
CNOT2-215ENST00000548863 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
CNOT2-215ENST00000548863 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
CNOT2-215ENST00000548863 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
CNOT2-215ENST00000548863 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
CNOT2-215ENST00000548863 SLC6A16Q9GZN6 736 aa12.52□□□□□ -0.41
CNOT2-215ENST00000548863 ZNF598Q86UK7 904 aaKnown RBP12.51□□□□□ -0.41
CNOT2-215ENST00000548863 GCGRP47871 477 aa12.5□□□□□ -0.41
CNOT2-215ENST00000548863 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
CNOT2-215ENST00000548863 MORN1Q5T089 497 aa12.5□□□□□ -0.41
CNOT2-215ENST00000548863 TRIM67Q6ZTA4 783 aa12.5□□□□□ -0.41
CNOT2-215ENST00000548863 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
CNOT2-215ENST00000548863 SPSB2Q99619 263 aa12.5□□□□□ -0.41
CNOT2-215ENST00000548863 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
CNOT2-215ENST00000548863 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
CNOT2-215ENST00000548863 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
CNOT2-215ENST00000548863 PRR20EP86478 221 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 PRR20CP86479 221 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 PRR20DP86480 221 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 PRR20BP86481 221 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 PRR20AP86496 221 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
CNOT2-215ENST00000548863 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
CNOT2-215ENST00000548863 FUT2Q10981 343 aa12.47□□□□□ -0.41
CNOT2-215ENST00000548863 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
CNOT2-215ENST00000548863 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
CNOT2-215ENST00000548863 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
CNOT2-215ENST00000548863 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
CNOT2-215ENST00000548863 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
CNOT2-215ENST00000548863 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
CNOT2-215ENST00000548863 IRF6O14896 467 aa12.41□□□□□ -0.42
CNOT2-215ENST00000548863 ZNF697Q5TEC3 545 aa12.41□□□□□ -0.42
CNOT2-215ENST00000548863 GDF9O60383 454 aa12.4□□□□□ -0.42
CNOT2-215ENST00000548863 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
CNOT2-215ENST00000548863 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-215ENST00000548863 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
CNOT2-215ENST00000548863 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
CNOT2-215ENST00000548863 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-215ENST00000548863 DGAT1O75907 488 aa12.38□□□□□ -0.43
CNOT2-215ENST00000548863 CD46P15529 392 aa12.37□□□□□ -0.43
CNOT2-215ENST00000548863 RPIAP49247 311 aa12.37□□□□□ -0.43
CNOT2-215ENST00000548863 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
CNOT2-215ENST00000548863 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
CNOT2-215ENST00000548863 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
CNOT2-215ENST00000548863 MYT1Q01538 1121 aa12.32□□□□□ -0.44
CNOT2-215ENST00000548863 Q3C1V9 767 aa12.32□□□□□ -0.44
CNOT2-215ENST00000548863 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
CNOT2-215ENST00000548863 CD2BP2O95400 341 aaKnown RBP12.31□□□□□ -0.44
CNOT2-215ENST00000548863 PKD2L1Q9P0L9 805 aa12.31□□□□□ -0.44
CNOT2-215ENST00000548863 USP46P62068 366 aa12.3□□□□□ -0.44
CNOT2-215ENST00000548863 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
CNOT2-215ENST00000548863 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
CNOT2-215ENST00000548863 TNFRSF10AO00220 468 aa12.29□□□□□ -0.44
CNOT2-215ENST00000548863 KDM4AO75164 1064 aa12.29□□□□□ -0.44
CNOT2-215ENST00000548863 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
CNOT2-215ENST00000548863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
CNOT2-215ENST00000548863 MMP16P51512 607 aa12.27□□□□□ -0.45
CNOT2-215ENST00000548863 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
CNOT2-215ENST00000548863 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.45
CNOT2-215ENST00000548863 FAM187AA6NFU0 413 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms