RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 KIF15Q9NS87 1388 aa30.34■■■□□ 2.45
CTDSP2-204ENST00000548823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.33■■■□□ 2.45
CTDSP2-204ENST00000548823 KANK1Q14678 1352 aa30.31■■■□□ 2.44
CTDSP2-204ENST00000548823 BCANQ96GW7 911 aa30.29■■■□□ 2.44
CTDSP2-204ENST00000548823 RXRBP28702 533 aa30.27■■■□□ 2.44
CTDSP2-204ENST00000548823 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
CTDSP2-204ENST00000548823 CHD2O14647 1828 aaKnown RBP30.26■■■□□ 2.43
CTDSP2-204ENST00000548823 ADGRB3O60242 1522 aa30.26■■■□□ 2.43
CTDSP2-204ENST00000548823 LMTK2Q8IWU2 1503 aa30.26■■■□□ 2.43
CTDSP2-204ENST00000548823 NCOA3Q9Y6Q9 1424 aa30.24■■■□□ 2.43
CTDSP2-204ENST00000548823 SHPRHQ149N8 1683 aa30.23■■■□□ 2.43
CTDSP2-204ENST00000548823 CDK12Q9NYV4 1490 aaPredicted RBP30.23■■■□□ 2.43
CTDSP2-204ENST00000548823 NOS1P29475 1434 aa30.22■■■□□ 2.43
CTDSP2-204ENST00000548823 SLC52A1Q9NWF4 448 aa30.22■■■□□ 2.43
CTDSP2-204ENST00000548823 AHDC1Q5TGY3 1603 aaPredicted RBP30.2■■■□□ 2.43
CTDSP2-204ENST00000548823 CROCC2H7BZ55 1655 aa30.18■■■□□ 2.42
CTDSP2-204ENST00000548823 PLEKHG1Q9ULL1 1385 aa30.18■■■□□ 2.42
CTDSP2-204ENST00000548823 ABCC5O15440 1437 aa30.17■■■□□ 2.42
CTDSP2-204ENST00000548823 HRCP23327 699 aa30.17■■■□□ 2.42
CTDSP2-204ENST00000548823 CADPS2Q86UW7 1296 aa30.15■■■□□ 2.42
CTDSP2-204ENST00000548823 KANK4Q5T7N3 995 aaPredicted RBP30.15■■■□□ 2.42
CTDSP2-204ENST00000548823 C14orf37Q86TY3 774 aa30.15■■■□□ 2.42
CTDSP2-204ENST00000548823 ZFYVE9O95405 1425 aa30.14■■■□□ 2.42
CTDSP2-204ENST00000548823 HDGFP51858 240 aaKnown RBP30.14■■■□□ 2.41
CTDSP2-204ENST00000548823 C19orf44Q9H6X5 657 aa30.13■■■□□ 2.41
CTDSP2-204ENST00000548823 TBX22Q9Y458 520 aa30.13■■■□□ 2.41
CTDSP2-204ENST00000548823 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.12■■■□□ 2.41
CTDSP2-204ENST00000548823 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
CTDSP2-204ENST00000548823 ATF3P18847 181 aa30.11■■■□□ 2.41
CTDSP2-204ENST00000548823 RIMS2Q9UQ26 1411 aa30.08■■■□□ 2.41
CTDSP2-204ENST00000548823 NUTM2BA6NNL0 878 aaPredicted RBP30.08■■■□□ 2.41
CTDSP2-204ENST00000548823 NUTM2EB1AL46 878 aaPredicted RBP30.08■■■□□ 2.41
CTDSP2-204ENST00000548823 NUTM2AQ8IVF1 878 aaPredicted RBP30.08■■■□□ 2.41
CTDSP2-204ENST00000548823 MYO5BQ9ULV0 1848 aa30.07■■■□□ 2.4
CTDSP2-204ENST00000548823 DIP2AQ14689 1571 aa30.07■■■□□ 2.4
CTDSP2-204ENST00000548823 AFF2P51816 1311 aa30.07■■■□□ 2.4
CTDSP2-204ENST00000548823 DAPK1P53355 1430 aa30.07■■■□□ 2.4
CTDSP2-204ENST00000548823 SRCAPQ6ZRS2 3230 aa30.06■■■□□ 2.4
CTDSP2-204ENST00000548823 ANKRD30AQ9BXX3 1397 aa30.04■■■□□ 2.4
CTDSP2-204ENST00000548823 BRINP3Q76B58 766 aa30.03■■■□□ 2.4
CTDSP2-204ENST00000548823 RPRD2Q5VT52 1461 aaKnown RBP30.03■■■□□ 2.4
CTDSP2-204ENST00000548823 PTPN23Q9H3S7 1636 aa30.03■■■□□ 2.4
CTDSP2-204ENST00000548823 GCC2Q8IWJ2 1684 aa30.01■■■□□ 2.39
CTDSP2-204ENST00000548823 PIK3R4Q99570 1358 aa30.01■■■□□ 2.39
CTDSP2-204ENST00000548823 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.01■■■□□ 2.39
CTDSP2-204ENST00000548823 TMEM131LA2VDJ0 1609 aa30■■■□□ 2.39
CTDSP2-204ENST00000548823 RGS12O14924 1447 aa29.99■■■□□ 2.39
CTDSP2-204ENST00000548823 RBM6P78332 1123 aaKnown RBP29.99■■■□□ 2.39
CTDSP2-204ENST00000548823 ADAMTS13Q76LX8 1427 aa29.98■■■□□ 2.39
CTDSP2-204ENST00000548823 CHIC2Q9UKJ5 165 aa29.98■■■□□ 2.39
CTDSP2-204ENST00000548823 SETD5Q9C0A6 1442 aa29.98■■■□□ 2.39
CTDSP2-204ENST00000548823 QTRT2Q9H974 415 aaKnown RBP29.97■■■□□ 2.39
CTDSP2-204ENST00000548823 DCCP43146 1447 aa29.93■■■□□ 2.38
CTDSP2-204ENST00000548823 NUTM2DQ5VT03 806 aaPredicted RBP29.92■■■□□ 2.38
CTDSP2-204ENST00000548823 LRRC59Q96AG4 307 aaKnown RBP29.92■■■□□ 2.38
CTDSP2-204ENST00000548823 C8orf37Q96NL8 207 aa29.92■■■□□ 2.38
CTDSP2-204ENST00000548823 ASXL1Q8IXJ9 1541 aa29.92■■■□□ 2.38
CTDSP2-204ENST00000548823 AMOTL2Q9Y2J4 779 aa29.9■■■□□ 2.38
CTDSP2-204ENST00000548823 RRBP1Q9P2E9 1410 aaKnown RBP29.89■■■□□ 2.38
CTDSP2-204ENST00000548823 NHSL1Q5SYE7 1610 aa29.88■■■□□ 2.37
CTDSP2-204ENST00000548823 TRPM2O94759 1503 aa29.88■■■□□ 2.37
CTDSP2-204ENST00000548823 CHGAP10645 457 aaKnown RBP29.88■■■□□ 2.37
CTDSP2-204ENST00000548823 FOXD1Q16676 465 aa29.87■■■□□ 2.37
CTDSP2-204ENST00000548823 NGLY1Q96IV0 654 aa29.86■■■□□ 2.37
CTDSP2-204ENST00000548823 ATAD2Q6PL18 1390 aa29.85■■■□□ 2.37
CTDSP2-204ENST00000548823 PTPRUQ92729 1446 aa29.85■■■□□ 2.37
CTDSP2-204ENST00000548823 MST1RQ04912 1400 aa29.83■■■□□ 2.37
CTDSP2-204ENST00000548823 ADGRL2O95490 1459 aa29.83■■■□□ 2.37
CTDSP2-204ENST00000548823 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
CTDSP2-204ENST00000548823 ZRANB1Q9UGI0 708 aa29.83■■■□□ 2.37
CTDSP2-204ENST00000548823 PNPLA6Q8IY17 1366 aa29.83■■■□□ 2.37
CTDSP2-204ENST00000548823 ANKRD50Q9ULJ7 1429 aa29.8■■■□□ 2.36
CTDSP2-204ENST00000548823 UNC13BO14795 1591 aa29.76■■■□□ 2.36
CTDSP2-204ENST00000548823 XRN1Q8IZH2 1706 aaKnown RBP29.75■■■□□ 2.35
CTDSP2-204ENST00000548823 DDX17Q92841 729 aaKnown RBP29.75■■■□□ 2.35
CTDSP2-204ENST00000548823 ADAMTS2O95450 1211 aa29.73■■■□□ 2.35
CTDSP2-204ENST00000548823 TRPC5Q9UL62 973 aaPredicted RBP29.71■■■□□ 2.35
CTDSP2-204ENST00000548823 E9PCH4 1651 aa29.7■■■□□ 2.35
CTDSP2-204ENST00000548823 USP21Q9UK80 565 aa29.7■■■□□ 2.35
CTDSP2-204ENST00000548823 SETBP1Q9Y6X0 1596 aa29.7■■■□□ 2.34
CTDSP2-204ENST00000548823 CCDC125Q86Z20 511 aa29.68■■■□□ 2.34
CTDSP2-204ENST00000548823 NRXN3Q9Y4C0 1643 aa29.67■■■□□ 2.34
CTDSP2-204ENST00000548823 ADGRL3Q9HAR2 1447 aa29.67■■■□□ 2.34
CTDSP2-204ENST00000548823 FNBP4Q8N3X1 1017 aaPredicted RBP29.64■■■□□ 2.34
CTDSP2-204ENST00000548823 EP400Q96L91 3159 aa29.62■■■□□ 2.33
CTDSP2-204ENST00000548823 METP08581 1390 aa29.61■■■□□ 2.33
CTDSP2-204ENST00000548823 LAMC1P11047 1609 aa29.61■■■□□ 2.33
CTDSP2-204ENST00000548823 ATRNO75882 1429 aa29.61■■■□□ 2.33
CTDSP2-204ENST00000548823 PTCH1Q13635 1447 aa29.61■■■□□ 2.33
CTDSP2-204ENST00000548823 C1orf167Q5SNV9 1468 aa29.59■■■□□ 2.33
CTDSP2-204ENST00000548823 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
CTDSP2-204ENST00000548823 NALCNQ8IZF0 1738 aa29.59■■■□□ 2.33
CTDSP2-204ENST00000548823 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
CTDSP2-204ENST00000548823 IQGAP3Q86VI3 1631 aa29.56■■■□□ 2.32
CTDSP2-204ENST00000548823 ORAI2Q96SN7 254 aa29.51■■■□□ 2.31
CTDSP2-204ENST00000548823 CCER1Q8TC90 406 aaPredicted RBP29.5■■■□□ 2.31
CTDSP2-204ENST00000548823 COL22A1Q8NFW1 1626 aaPredicted RBP29.5■■■□□ 2.31
CTDSP2-204ENST00000548823 ZNF326Q5BKZ1 582 aaKnown RBP29.49■■■□□ 2.31
CTDSP2-204ENST00000548823 BCL9LQ86UU0 1499 aa29.47■■■□□ 2.31
CTDSP2-204ENST00000548823 NUP155O75694 1391 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms