RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
TROAP-208ENST00000548817 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
TROAP-208ENST00000548817 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
TROAP-208ENST00000548817 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
TROAP-208ENST00000548817 AFF2P51816 1311 aa13.47□□□□□ -0.25
TROAP-208ENST00000548817 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
TROAP-208ENST00000548817 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
TROAP-208ENST00000548817 ERBINQ96RT1 1412 aa13.44□□□□□ -0.26
TROAP-208ENST00000548817 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
TROAP-208ENST00000548817 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
TROAP-208ENST00000548817 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
TROAP-208ENST00000548817 IDI1Q13907 227 aa13.43□□□□□ -0.26
TROAP-208ENST00000548817 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
TROAP-208ENST00000548817 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
TROAP-208ENST00000548817 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
TROAP-208ENST00000548817 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
TROAP-208ENST00000548817 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.43□□□□□ -0.26
TROAP-208ENST00000548817 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
TROAP-208ENST00000548817 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
TROAP-208ENST00000548817 SETBP1Q9Y6X0 1596 aa13.42□□□□□ -0.26
TROAP-208ENST00000548817 ATF3P18847 181 aa13.42□□□□□ -0.26
TROAP-208ENST00000548817 KANK1Q14678 1352 aa13.42□□□□□ -0.26
TROAP-208ENST00000548817 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
TROAP-208ENST00000548817 NOS1P29475 1434 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 DCCP43146 1447 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 CCDC125Q86Z20 511 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 BCANQ96GW7 911 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
TROAP-208ENST00000548817 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
TROAP-208ENST00000548817 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
TROAP-208ENST00000548817 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
TROAP-208ENST00000548817 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
TROAP-208ENST00000548817 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
TROAP-208ENST00000548817 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
TROAP-208ENST00000548817 EP400Q96L91 3159 aa13.38□□□□□ -0.27
TROAP-208ENST00000548817 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
TROAP-208ENST00000548817 MYOM3Q5VTT5 1437 aa13.37□□□□□ -0.27
TROAP-208ENST00000548817 C8orf37Q96NL8 207 aa13.36□□□□□ -0.27
TROAP-208ENST00000548817 LRP5O75197 1615 aa13.35□□□□□ -0.27
TROAP-208ENST00000548817 PPP1R15AO75807 674 aaPredicted RBP13.34□□□□□ -0.27
TROAP-208ENST00000548817 RPRD2Q5VT52 1461 aaKnown RBP13.34□□□□□ -0.27
TROAP-208ENST00000548817 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
TROAP-208ENST00000548817 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
TROAP-208ENST00000548817 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
TROAP-208ENST00000548817 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
TROAP-208ENST00000548817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
TROAP-208ENST00000548817 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
TROAP-208ENST00000548817 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
TROAP-208ENST00000548817 TRPM2O94759 1503 aa13.31□□□□□ -0.28
TROAP-208ENST00000548817 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
TROAP-208ENST00000548817 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
TROAP-208ENST00000548817 MST1RQ04912 1400 aa13.3□□□□□ -0.28
TROAP-208ENST00000548817 MYO5BQ9ULV0 1848 aa13.3□□□□□ -0.28
TROAP-208ENST00000548817 APLP2Q06481 763 aa13.3□□□□□ -0.28
TROAP-208ENST00000548817 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
TROAP-208ENST00000548817 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
TROAP-208ENST00000548817 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
TROAP-208ENST00000548817 ATRNO75882 1429 aa13.29□□□□□ -0.28
TROAP-208ENST00000548817 FNBP4Q8N3X1 1017 aaPredicted RBP13.28□□□□□ -0.28
TROAP-208ENST00000548817 USP21Q9UK80 565 aa13.28□□□□□ -0.28
TROAP-208ENST00000548817 LAMC1P11047 1609 aa13.28□□□□□ -0.28
TROAP-208ENST00000548817 ABCC5O15440 1437 aa13.26□□□□□ -0.29
TROAP-208ENST00000548817 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
TROAP-208ENST00000548817 XRN1Q8IZH2 1706 aaKnown RBP13.26□□□□□ -0.29
TROAP-208ENST00000548817 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
TROAP-208ENST00000548817 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
TROAP-208ENST00000548817 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
TROAP-208ENST00000548817 KANK4Q5T7N3 995 aaPredicted RBP13.24□□□□□ -0.29
TROAP-208ENST00000548817 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
TROAP-208ENST00000548817 UNC13BO14795 1591 aa13.23□□□□□ -0.29
TROAP-208ENST00000548817 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
TROAP-208ENST00000548817 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
TROAP-208ENST00000548817 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
TROAP-208ENST00000548817 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
TROAP-208ENST00000548817 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
TROAP-208ENST00000548817 DAPK1P53355 1430 aa13.22□□□□□ -0.29
TROAP-208ENST00000548817 SOS2Q07890 1332 aaPredicted RBP13.2□□□□□ -0.3
TROAP-208ENST00000548817 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
TROAP-208ENST00000548817 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
TROAP-208ENST00000548817 NALCNQ8IZF0 1738 aa13.18□□□□□ -0.3
TROAP-208ENST00000548817 MYOM2P54296 1465 aa13.17□□□□□ -0.3
TROAP-208ENST00000548817 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
TROAP-208ENST00000548817 MARF1Q9Y4F3 1742 aaKnown RBP13.17□□□□□ -0.3
TROAP-208ENST00000548817 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
TROAP-208ENST00000548817 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
TROAP-208ENST00000548817 GJD4Q96KN9 370 aaPredicted RBP13.17□□□□□ -0.3
TROAP-208ENST00000548817 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
TROAP-208ENST00000548817 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
TROAP-208ENST00000548817 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
TROAP-208ENST00000548817 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
TROAP-208ENST00000548817 HRCP23327 699 aa13.13□□□□□ -0.31
TROAP-208ENST00000548817 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
TROAP-208ENST00000548817 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
TROAP-208ENST00000548817 GLI3P10071 1580 aa13.12□□□□□ -0.31
TROAP-208ENST00000548817 ANKRD50Q9ULJ7 1429 aa13.12□□□□□ -0.31
TROAP-208ENST00000548817 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
TROAP-208ENST00000548817 E9PCH4 1651 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms