RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 PLEKHG1Q9ULL1 1385 aa11.36□□□□□ -0.59
ERBB3-206ENST00000548709 NOS1P29475 1434 aa11.35□□□□□ -0.59
ERBB3-206ENST00000548709 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
ERBB3-206ENST00000548709 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
ERBB3-206ENST00000548709 STRCP1A6NGW2 1772 aa11.35□□□□□ -0.59
ERBB3-206ENST00000548709 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
ERBB3-206ENST00000548709 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
ERBB3-206ENST00000548709 FOXD1Q16676 465 aa11.34□□□□□ -0.59
ERBB3-206ENST00000548709 TET3O43151 1660 aa11.33□□□□□ -0.6
ERBB3-206ENST00000548709 DAPK1P53355 1430 aa11.33□□□□□ -0.6
ERBB3-206ENST00000548709 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
ERBB3-206ENST00000548709 LOC105371045A0A1W2PR82 267 aa11.31□□□□□ -0.6
ERBB3-206ENST00000548709 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
ERBB3-206ENST00000548709 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
ERBB3-206ENST00000548709 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
ERBB3-206ENST00000548709 RIMS2Q9UQ26 1411 aa11.31□□□□□ -0.6
ERBB3-206ENST00000548709 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
ERBB3-206ENST00000548709 ZFYVE9O95405 1425 aa11.29□□□□□ -0.6
ERBB3-206ENST00000548709 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
ERBB3-206ENST00000548709 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
ERBB3-206ENST00000548709 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
ERBB3-206ENST00000548709 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
ERBB3-206ENST00000548709 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
ERBB3-206ENST00000548709 ADGRB3O60242 1522 aa11.27□□□□□ -0.61
ERBB3-206ENST00000548709 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-206ENST00000548709 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-206ENST00000548709 RBM6P78332 1123 aaKnown RBP11.27□□□□□ -0.61
ERBB3-206ENST00000548709 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
ERBB3-206ENST00000548709 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-206ENST00000548709 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
ERBB3-206ENST00000548709 NWD1Q149M9 1564 aa11.27□□□□□ -0.61
ERBB3-206ENST00000548709 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-206ENST00000548709 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
ERBB3-206ENST00000548709 CEP152O94986 1710 aa11.26□□□□□ -0.61
ERBB3-206ENST00000548709 AFF2P51816 1311 aa11.25□□□□□ -0.61
ERBB3-206ENST00000548709 DCCP43146 1447 aa11.25□□□□□ -0.61
ERBB3-206ENST00000548709 ADGRL2O95490 1459 aa11.24□□□□□ -0.61
ERBB3-206ENST00000548709 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
ERBB3-206ENST00000548709 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
ERBB3-206ENST00000548709 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
ERBB3-206ENST00000548709 SETD5Q9C0A6 1442 aa11.23□□□□□ -0.61
ERBB3-206ENST00000548709 PTPN23Q9H3S7 1636 aa11.23□□□□□ -0.61
ERBB3-206ENST00000548709 XIRP1Q702N8 1843 aaKnown RBP11.22□□□□□ -0.61
ERBB3-206ENST00000548709 C8orf37Q96NL8 207 aa11.21□□□□□ -0.61
ERBB3-206ENST00000548709 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
ERBB3-206ENST00000548709 LRP6O75581 1613 aa11.2□□□□□ -0.62
ERBB3-206ENST00000548709 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
ERBB3-206ENST00000548709 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
ERBB3-206ENST00000548709 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
ERBB3-206ENST00000548709 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
ERBB3-206ENST00000548709 COL16A1Q07092 1604 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-206ENST00000548709 DIP2AQ14689 1571 aa11.19□□□□□ -0.62
ERBB3-206ENST00000548709 NUP155O75694 1391 aa11.18□□□□□ -0.62
ERBB3-206ENST00000548709 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
ERBB3-206ENST00000548709 TRPC5Q9UL62 973 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-206ENST00000548709 ATAD2Q6PL18 1390 aa11.16□□□□□ -0.62
ERBB3-206ENST00000548709 TRPM2O94759 1503 aa11.16□□□□□ -0.62
ERBB3-206ENST00000548709 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
ERBB3-206ENST00000548709 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
ERBB3-206ENST00000548709 USP21Q9UK80 565 aa11.16□□□□□ -0.62
ERBB3-206ENST00000548709 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
ERBB3-206ENST00000548709 TMEM131LA2VDJ0 1609 aa11.15□□□□□ -0.62
ERBB3-206ENST00000548709 MST1RQ04912 1400 aa11.15□□□□□ -0.62
ERBB3-206ENST00000548709 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
ERBB3-206ENST00000548709 PNPLA6Q8IY17 1366 aa11.15□□□□□ -0.63
ERBB3-206ENST00000548709 CHD2O14647 1828 aaKnown RBP11.14□□□□□ -0.63
ERBB3-206ENST00000548709 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
ERBB3-206ENST00000548709 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-206ENST00000548709 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
ERBB3-206ENST00000548709 METP08581 1390 aa11.13□□□□□ -0.63
ERBB3-206ENST00000548709 ADGRL3Q9HAR2 1447 aa11.12□□□□□ -0.63
ERBB3-206ENST00000548709 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
ERBB3-206ENST00000548709 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
ERBB3-206ENST00000548709 DDX17Q92841 729 aaKnown RBP11.11□□□□□ -0.63
ERBB3-206ENST00000548709 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.11□□□□□ -0.63
ERBB3-206ENST00000548709 RGS12O14924 1447 aa11.1□□□□□ -0.63
ERBB3-206ENST00000548709 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
ERBB3-206ENST00000548709 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
ERBB3-206ENST00000548709 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
ERBB3-206ENST00000548709 ORAI2Q96SN7 254 aa11.09□□□□□ -0.63
ERBB3-206ENST00000548709 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
ERBB3-206ENST00000548709 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
ERBB3-206ENST00000548709 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.64
ERBB3-206ENST00000548709 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
ERBB3-206ENST00000548709 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
ERBB3-206ENST00000548709 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
ERBB3-206ENST00000548709 ITGAEP38570 1179 aa11.06□□□□□ -0.64
ERBB3-206ENST00000548709 SF3B2Q13435 895 aaKnown RBP11.06□□□□□ -0.64
ERBB3-206ENST00000548709 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
ERBB3-206ENST00000548709 UNC13BO14795 1591 aa11.05□□□□□ -0.64
ERBB3-206ENST00000548709 ATRNO75882 1429 aa11.05□□□□□ -0.64
ERBB3-206ENST00000548709 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
ERBB3-206ENST00000548709 FOXO3O43524 673 aa11.04□□□□□ -0.64
ERBB3-206ENST00000548709 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
ERBB3-206ENST00000548709 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
ERBB3-206ENST00000548709 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.65
ERBB3-206ENST00000548709 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
ERBB3-206ENST00000548709 PSME1Q06323 249 aa11.01□□□□□ -0.65
ERBB3-206ENST00000548709 E9PCH4 1651 aa11.01□□□□□ -0.65
ERBB3-206ENST00000548709 XRN1Q8IZH2 1706 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms