RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SPHKAPQ2M3C7 1700 aa12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 ASXL1Q8IXJ9 1541 aa12.95□□□□□ -0.34
SMARCD1-205ENST00000548573 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
SMARCD1-205ENST00000548573 PLCH2O75038 1416 aa12.94□□□□□ -0.34
SMARCD1-205ENST00000548573 TRPM2O94759 1503 aa12.94□□□□□ -0.34
SMARCD1-205ENST00000548573 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.94□□□□□ -0.34
SMARCD1-205ENST00000548573 CEP152O94986 1710 aa12.93□□□□□ -0.34
SMARCD1-205ENST00000548573 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
SMARCD1-205ENST00000548573 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
SMARCD1-205ENST00000548573 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-205ENST00000548573 ABCC1P33527 1531 aa12.93□□□□□ -0.34
SMARCD1-205ENST00000548573 PTPRTO14522 1441 aa12.91□□□□□ -0.34
SMARCD1-205ENST00000548573 MYOM1P52179 1685 aa12.91□□□□□ -0.34
SMARCD1-205ENST00000548573 CHD1O14646 1710 aa12.91□□□□□ -0.34
SMARCD1-205ENST00000548573 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
SMARCD1-205ENST00000548573 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-205ENST00000548573 SLFN5Q08AF3 891 aa12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 RTEL1-TNFRSF6BF6WH68 1400 aa12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
SMARCD1-205ENST00000548573 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
SMARCD1-205ENST00000548573 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
SMARCD1-205ENST00000548573 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
SMARCD1-205ENST00000548573 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
SMARCD1-205ENST00000548573 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
SMARCD1-205ENST00000548573 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
SMARCD1-205ENST00000548573 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
SMARCD1-205ENST00000548573 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
SMARCD1-205ENST00000548573 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
SMARCD1-205ENST00000548573 TET3O43151 1660 aa12.87□□□□□ -0.35
SMARCD1-205ENST00000548573 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
SMARCD1-205ENST00000548573 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
SMARCD1-205ENST00000548573 ZCCHC11Q5TAX3 1644 aaKnown RBP12.86□□□□□ -0.35
SMARCD1-205ENST00000548573 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
SMARCD1-205ENST00000548573 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
SMARCD1-205ENST00000548573 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
SMARCD1-205ENST00000548573 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
SMARCD1-205ENST00000548573 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
SMARCD1-205ENST00000548573 E9PSI1 815 aa12.84□□□□□ -0.35
SMARCD1-205ENST00000548573 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
SMARCD1-205ENST00000548573 MYOM2P54296 1465 aa12.83□□□□□ -0.36
SMARCD1-205ENST00000548573 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
SMARCD1-205ENST00000548573 APAF1O14727 1248 aa12.82□□□□□ -0.36
SMARCD1-205ENST00000548573 MAP3K4Q9Y6R4 1608 aa12.82□□□□□ -0.36
SMARCD1-205ENST00000548573 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
SMARCD1-205ENST00000548573 GSE1Q14687 1217 aa12.81□□□□□ -0.36
SMARCD1-205ENST00000548573 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
SMARCD1-205ENST00000548573 KANK1Q14678 1352 aa12.81□□□□□ -0.36
SMARCD1-205ENST00000548573 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
SMARCD1-205ENST00000548573 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
SMARCD1-205ENST00000548573 VIRMAQ69YN4 1812 aaKnown RBP12.8□□□□□ -0.36
SMARCD1-205ENST00000548573 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
SMARCD1-205ENST00000548573 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
SMARCD1-205ENST00000548573 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
SMARCD1-205ENST00000548573 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
SMARCD1-205ENST00000548573 ABCA6Q8N139 1617 aa12.79□□□□□ -0.36
SMARCD1-205ENST00000548573 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
SMARCD1-205ENST00000548573 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
SMARCD1-205ENST00000548573 BCAR3O75815 825 aa12.78□□□□□ -0.36
SMARCD1-205ENST00000548573 SLC4A3P48751 1232 aa12.78□□□□□ -0.36
SMARCD1-205ENST00000548573 RGS3P49796 1198 aa12.78□□□□□ -0.36
SMARCD1-205ENST00000548573 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
SMARCD1-205ENST00000548573 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
SMARCD1-205ENST00000548573 AFAP1Q8N556 730 aa12.77□□□□□ -0.36
SMARCD1-205ENST00000548573 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
SMARCD1-205ENST00000548573 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
SMARCD1-205ENST00000548573 KIF1BO60333 1816 aa12.76□□□□□ -0.37
SMARCD1-205ENST00000548573 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
SMARCD1-205ENST00000548573 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
SMARCD1-205ENST00000548573 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
SMARCD1-205ENST00000548573 AAMPQ13685 434 aa12.75□□□□□ -0.37
SMARCD1-205ENST00000548573 ABCA9Q8IUA7 1624 aa12.75□□□□□ -0.37
SMARCD1-205ENST00000548573 MROH1Q8NDA8 1641 aa12.75□□□□□ -0.37
SMARCD1-205ENST00000548573 IGHDP01880 384 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 SETBP1Q9Y6X0 1596 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 SHPRHQ149N8 1683 aa12.74□□□□□ -0.37
SMARCD1-205ENST00000548573 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
SMARCD1-205ENST00000548573 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
SMARCD1-205ENST00000548573 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
SMARCD1-205ENST00000548573 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
SMARCD1-205ENST00000548573 USP19O94966 1318 aa12.72□□□□□ -0.37
SMARCD1-205ENST00000548573 KIF3BO15066 747 aa12.72□□□□□ -0.37
SMARCD1-205ENST00000548573 UGGT1Q9NYU2 1555 aa12.72□□□□□ -0.37
SMARCD1-205ENST00000548573 FANCAO15360 1455 aa12.72□□□□□ -0.37
SMARCD1-205ENST00000548573 IQSEC2Q5JU85 1478 aa12.71□□□□□ -0.37
SMARCD1-205ENST00000548573 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.37
SMARCD1-205ENST00000548573 USP32Q8NFA0 1604 aa12.71□□□□□ -0.38
SMARCD1-205ENST00000548573 MROH2AA6NES4 1674 aa12.71□□□□□ -0.38
SMARCD1-205ENST00000548573 CANXP27824 592 aaKnown RBP12.71□□□□□ -0.38
SMARCD1-205ENST00000548573 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.38
SMARCD1-205ENST00000548573 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
SMARCD1-205ENST00000548573 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms